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comparison dr-disco_integrate.xml @ 8:922b52cf9b35 draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit b4991fb40364a975d0ea782035b930874c57665c
author erasmus-medical-center
date Thu, 14 Sep 2017 08:35:12 -0400
parents 6b87499054f6
children c3ce472a315f
comparison
equal deleted inserted replaced
7:6b87499054f6 8:922b52cf9b35
1 <tool id="dr_disco_integrate" name="Dr. Disco (integrate)" version="@TOOL_VERSION@-g0"> 1 <tool id="dr_disco_integrate" name="Dr. Disco (integrate)" version="@TOOL_VERSION@">
2 <description>Merges corresponding genomic breaks and exon-to-exon junctions</description> 2 <description>Merges corresponding genomic breaks and exon-to-exon junctions</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 6
7 <expand macro="requirements"/> 7 <expand macro="requirements"/>
8 <expand macro="version_command"/> 8 <expand macro="version_command"/>
9 9
10 <command detect_errors="exit_code"><![CDATA[ 10 <command detect_errors="exit_code"><![CDATA[
11 dr-disco 11 dr-disco
12 integrate 12 integrate
13 #if $gtf: 13 #if $gtf:
14 --gtf ${gtf} 14 --gtf '${gtf}'
15 #end if 15 #end if
16 16
17 '${dr_disco_classify_output}' 17 '${dr_disco_classify_output}'
18 '${dr_disco_integrate_output}' 18 '${dr_disco_integrate_output}'
19 ]]></command> 19 ]]></command>