Mercurial > repos > erasmus-medical-center > dr_disco
view test-data/blacklist-junctions.hg38.txt @ 7:6b87499054f6 draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit 39fc49ee3ea0645de59259c1a3bc0d2f1fcdc23c
author | erasmus-medical-center |
---|---|
date | Thu, 14 Sep 2017 06:24:47 -0400 |
parents | 5348cfd3ba5c |
children |
line wrap: on
line source
chr-A pos-A direction-A chr-B pos-B direction-B id comment chr10 10919999 10920000 - chr10 11165485 11165486 + s11324,s11386,s13304,s13768,s14437,s14455,s15679,s18020,s18730,s18751,s18758,s5960,s5961,s6408,s7310,s7431,s8612,s8615,s8828,s8971,s9067,s9578 chr10 126970701 126970702 + chr10 127127764 127127765 - s4845,s6411,s6729,s6730,s6731,s7247,s10010,s11325,s11326,s11338,s11354,s11355,s11364,s11368,s11370,s11374,s11375,s11377,s11378,s11385,s11391,s11393,s11394,s11402,s11743,s11745,s11750,s11754,s11818,s13297,s13298r1,s13298r2,s13299r1,s13308,s13311,s13358,s13418,s13419,s13420,s13422,s13424,s13623,s13749,s13752,s13754,s13761,s13769,s14432,s14441,s14447,s14455,s14460,s14461,s15679,s15680,s15681,s18017,s18024,s18031,s18037,s18255,s18734,s18754,s20343,s20345,s20401,s20403,s20404,s4841,s4847,s4953,s4955,s4970,s5933,s5934,s5938,s5946,s5948,s5954,s5960,s5961,s6733,s7220,s7239,s7316,s7321,s7431,s8611,s8614,s8615,s8620,s8652,s8660,s8832,s8984,s9067,s9544,s9568,s9578,s9579,s9592,s9596,s9599,s9606,s9754,s9755,s9757,s9758,s9761,s9772,s9844 chr10 126970701 126970702 + chr10 127257429 127257430 - prtcl/014,024,032 chr10 17548348 17548349 + chr12 85726659 85726660 - s11744,s6729,s6730,s10011,s11324,s11355,s11383,s11386,s13297,s13298r1,s13298r2,s13306,s13428,s13626,s13749,s14460,s15681,s18017,s18020,s18031,s18037,s18151,s18758,s18759,s4970,s5942,s5947,s6727r1,s8652,s8965,s8984,s9004,s9544,s9568,s9585,s9761,s9775 chr10 19790186 19790187 - chr10 20001774 20001775 + s6046,s11361,s11378,s11402,s11817,s13312,s13629,s13771,s14441,s18749,s5946,s5954,s5964,s9541,s9755,s9844 chr10 27486892 27486967 - chr12 11038658 11038787 - s9759,s13307,s6408,s18022,s9064,s8982,s11377,s18037,s13629,s7428,s13424,s6732,s10014,s11326,s7217,s6729,s5954,s7250,s9757,s11367,s11402,s11375,s9597,s14461,s13428,s9754,s7240,s13421,s5947,s9589,s11355,s13299r2,s11384,s8830,s13299r1,s11750,s11745,s9568 chr10 34516993 34517160 - chr10 34814875 34814896 + s13749,s13770,s9757,s8828,s4845,s6411,s6731,s7247,s7248,s10011,s10014,s11364,s11377,s11384,s13296,s13428,s14437,s18020,s18022,s18031,s18037,s5942,s5945,s5948,s6413,s6727r1,s7426,s8652,s8965,s8977,s8984,s9064,s9575,s9585,s9592,s9772 chr10 38021018 38021427 - chr10 42628376 42628399 - s11391,s8978,s13312,s11359,s13426,s9582,s11326,s8981,s11760,s5961,s10010,s9757,s8652,s8971,s13307,s11743,s9761,s18017,s11368,s14461,s9575,s11383,s11386,s6046,s6411,s10011,s11324,s11325,s11338,s11354,s11355,s11360,s11364,s11365,s11367,s11375,s11378,s11380,s11384,s11385,s11397,s11402,s11745,s11750,s11751,s11762,s13296,s13297,s13298r1,s13298r2,s13299r1,s13310,s13311,s13422,s13622,s14447,s14455,s14460,s15680,s15681,s18024,s18031,s18037,s18748,s18749,s18759,s4953,s5938,s6727r1,s7314,s7321,s8660,s8977,s8980,s9004,s9541,s9568,s9578,s9596 chr10 38021484 38021496 + chr10 42628291 42628315 + s9597,s8830,s11402,s13312,s9758,s11760,s11342,s11380,s13306,s13311,s18024,s18037,s6720,s7318,s8612,s9757,s6418,s20405,s11324 chr10 50433475 50433476 + chr10 50590247 50590248 - SGMS1 large circular (1) s6046,s6729,s6730,s7247,s7250,s11338,s11341,s11355,s11393,s11762,s13304,s13308,s13416,s13420,s13633,s13749,s13768,s13769,s13771,s14436,s14439,s18151,s18751,s20400,s4841,s4954,s5948,s6408,s6409,s6413,s7240,s8611,s8614,s8615,s8616,s8622,s8828,s8965,s9064,s9067,s9575,s9584,s9596,s9597,s9606,s9608,s9755,s9757,s9758,s9761 chr10 50460672 50460673 + chr10 50590247 50590248 - SGMS1 large circular (2) s6731,s11342,s11383,s13298r1,s13426,s14432,s18730,s5954,s5960,s7431,s9578 chr10 52193235 52193236 + chr10 52350007 52350008 - SGMS1 large circular (3) prtcl/043 chr10 60279639 60279640 - chr10 60733262 60733263 + prtcl/007,011,015,019,025,026,039,125,147 chr10 75438413 75438495 - chr10 76036007 76036008 + s18730,s11750,s13358,s8616,s14441,s18170,s6411,s6729,s6730,s6731,s7247,s7250,s11324,s11326,s11337,s11359,s11364,s11366,s11377,s11386,s11393,s11402,s11750,s11751,s11754,s11764,s13298r1,s13298r2,s13302,s13311,s13358,s13416,s13418,s13426,s13427,s13428,s13622,s13749,s13752,s13755,s13770,s14432,s14435,s14436,s14441,s15679,s18020,s18022,s18031,s18037,s18170,s18730,s18758,s20401,s4847,s4955,s4970,s4975,s5930,s5961,s6016,s6409,s6720,s6721,s6727r1,s6733,s7217,s7314,s7316,s7318,s7321,s7427,s7427r2,s7428,s7431,s7454,s8614,s8615,s8616,s8623,s8660,s8828,s8971,s8977,s9004,s9064,s9065,s9544,s9571,s9575,s9578,s9584,s9592,s9606,s9608,s9755,s9757,s9758,s9761,s9772,s9775,s9777,s9844,s9845 chr10 77404023 77404024 - chr10 77637264 77637265 + prtcl/008,014,025,026,033,125,143 chr11 96093517 96093518 - chr11 96342907 96342908 + prtcl/015,038,147,151 chr12 23896024 23896027 - chr12 24213342 24277241 + SOX5-SOX5 (1) s11324,s11340,s11354,s11355,s11361,s11366,s11368,s11375,s11378,s11385,s11393,s11397,s11399,s11402,s11745,s11756,s11760,s11762,s11817,s13296,s13307,s13310,s13312,s13416,s13419,s13626,s13629,s13631,s13633,s13768,s13770,s14434,s14436,s14441,s14442,s14447,s14455,s14460,s15679,s18020,s18022,s18024,s18031,s18037,s18749,s18751,s18758,s20401,s20404,s20405,s4951,s4955,s4970,s5938,s6408,s6409,s6411,s6413,s6418,s6730,s7241,s7247,s7310,s7314,s7431,s7433r2,s7454,s8614,s8615,s8618,s8623,s8828,s8832,s8971,s8977,s9063,s9064,s9067,s9464,s9541,s9575,s9578,s9596,s9597,s9754,s9755,s9757,s9758,s9761 chr1 243270091 243270092 + chr1 243426558 243426559 - SDCCAG8 large circular (1) s11751,s13622,s13761,s13768 chr1 243293090 243293091 + chr1 243426558 243426559 - SDCCAG8 large circular (2) s6411,s7247,s7248,s7250,s11338,s11355,s11365,s11754,s11819,s13296,s13297,s13299r2,s13422,s13426,s13428,s13623,s13625,s13768,s14437,s14442,s18020,s18024,s18037,s18151,s18748,s18751,s20343,s20344,s5960,s6408,s7431,s7433r2,s8615,s8622,s8830,s8832,s8965,s9063,s9064,s9066,s9544,s9575,s9578,s9579,s9596,s9608,s9761 chr1 243304712 243304713 + chr1 243426558 243426559 - SDCCAG8 large circular (3) s6730,s6731,s11751,s11820,s13307,s13622,s13626,s14432,s18022,s5961,s7211,s8616,s9585,s9755 chr1 243307988 243307989 + chr1 243426558 243426559 - SDCCAG8 large circular (4) s13629,s4958,s6733 chr1 243316754 243316755 + chr1 243426558 243426559 - SDCCAG8 large circular (5) s11324,s11365,s13296,s13631,s14442,s14460,s18730,s18749 chr1 243512323 243512324 + chr1 243695716 243695717 - AKT3 large circular (1) chr1 243512323 243512324 + chr1 243843282 243843283 - AKT3 large circular (2) chr1 243545509 243545510 + chr1 243695716 243695717 - AKT3 large circular (3) chr1 243545509 243545510 + chr1 243843282 243843283 - AKT3 large circular (4) chr1 243552728 243552729 + chr1 243843282 243843283 - AKT3 large circular (5) chr1 243563719 243563720 + chr1 243843282 243843283 - AKT3 large circular (6) chr1 243572925 243572926 + chr1 243843282 243843283 - AKT3 large circular (7) chr1 243613670 243613671 + chr1 243843282 243843283 - AKT3 large circular (8) chr1 243637610 243637611 + chr1 243843282 243843283 - AKT3 large circular (9) chr1 243645892 243645893 + chr1 243843282 243843283 - AKT3 large circular (10) chr1 243664771 243664772 + chr1 243843282 243843283 - AKT3 large circular (11) chr1 243683196 243683197 + chr1 243843282 243843283 - AKT3 large circular (12) chr1 243695590 243695591 + chr1 243843282 243843283 - AKT3 large circular (13) chr12 66596927 66596928 - chr12 67069049 67069050 + s6729,s6730,s10011,s10014,s11326,s11338,s11365,s11751,s13298r1,s13298r2,s13299r1,s13311,s13418,s13622,s14436,s18020,s18022,s18031,s18037,s4841,s6016,s6727r1,s8652,s8830,s8965,s8977,s9064,s9464,s9575,s9592,s9608 chr12 70286837 70286838 + chr12 70288280 70288281 + s6729,s10011,s11365,s11391,s13310,s13625,s14461,s15679,s18759,s7239,s8982,s9575,s9758 chr12 77572266 77572267 - chr12 77940318 77940319 + s11355,s11365,s11370,s11377,s11391,s11394,s11762,s13304,s13306,s13308,s13419,s13422,s13623,s13626,s13629,s13631,s13768,s14434,s18017,s18022,s18024,s18037,s18259,s18734,s18748,s18751,s18758,s18759,s20342,s7239,s7318,s8615,s8622,s9062,s9063,s9066,s9575,s9608 chr12 94582538 94582539 - chr12 94818089 94818090 + s4845,s4845r2,s6730,s6731,s7247,s10011,s11326,s11354,s13299r1,s13419,s13420,s13768,s14461,s18020,s18748,s20345,s20400,s4847,s5954,s5961,s6408,s6413,s8611,s8614,s8622,s8965,s8984,s9758,s9775 chr12 94582538 94582539 - chr12 94873639 94873640 + 13418,s13761,s13771,s14434a chr13 107210755 107210756 - chr13 107865681 107865682 + FAM155A-FAM155A (1) s4845R,s6046R,s6411R,s6729R,s6731R,s7247R,s7248R,s7249R,s7250R,s10011,s11325,s11326,s11338,s11342,s11355,s11365,s11377,s11378,s11384,s11385,s11386,s11750,s11751,s11754,s11760,s11817,s11820,s13304,s13306,s13307,s13308,s13310,s13358,s13422,s13426,s13428,s13619,s13622,s13629,s13752,s13755,s13771,s14432,s14434,s14436,s14437,s14439,s14441,s14442,s14460,s14461,s15681,s18020,s18022,s18024,s18031,s18037,s18730,s18748,s18754,s18758,s18759,s4847,s4951,s4970,s4975,s5930,s5933,s5938,s5948,s5954,s5961,s6016,s6408,s6409,s6413,s6684,s6722,s6733,s7217,s7220,s7239,s7240,s7316,s7428,s7431,s8608,s8612,s8614,s8615,s8618,s8622,s8623,s8660,s8830,s8977,s8980,s8981,s8982,s9004,s9063,s9066,s9464,s9473,s9575,s9578,s9584,s9589,s9592,s9596,s9599,s9606,s9608,s9754,s9755,s9758,s9761,s9772,s9775 chr13 39343715 39344055 - chr13 39600830 39600887 + LHFP-LHFP (1) s6018,s4955,s7239,s13771,s13428,s13310,s11750,s11337,s13426,s11364,s9845,s13631,s18170,s8623,s13752,s18259,s7426,s8620,s13302,s13308,s11393,s5950,s9592,s13418,s4083R,s11762,s13296,s18751,s4951,s5947,s6406,s9575,s9775 chr13 39378421 39378527 - chr13 39600831 39600844 + LHFP-LHFP (2) s9761,s9592,s8971,s13761,s13304,s11324,s13298r1,s13421,s13749,s14437,s14442,s15679,s18020,s18037,s4955,s4975,s5961,s6722,s74092,s7431,s74332,s8612,s8828,s9064,s9571,s9579,s9757 chr13 96091569 96091570 - chr13 96832489 96832490 + HS6ST3-HS6ST3 (1) s6046,s7249,s11338,s11360,s11361,s11364,s11365,s11375,s11394,s11397,s11760,s11818,s11820,s13299r1,s13299r2,s13304,s13307,s13308,s13312,s13358,s13418,s13419,s13424,s13426,s13427,s13631,s13754,s13768,s13769,s13771,s14434,s14436,s15680,s15681,s18022,s18031,s18748,s18749,s18751,s18759,s20401,s20405,s4951,s4953,s4954,s4957,s4958,s5947,s6721,s7239,s7241,s8608,s8612,s8614,s8615,s8616,s8965,s8977,s9063,s9464,s9473,s9541,s9575,s9579,s9582,s9608,s9759 chr14 105588190 105588412 - chr14 105708681 106810491 + s18022,s11324,s5961,s5930,s7321,s11355,s11324,s11324,s7247R,s7427,s7427r2,s7247R,s74092,s7321,s14441,s7321,s13304,s13426,s7321,s8660,s6406,s8614,s8828,s11341,s18017,s11354,s13311,s8828,s6731,s7427,s7427r2,s7321,s8828,s6018,s7247R,s9579,s6406,s11326,s5954,s7431,s8611,s4954,s13755,s8618,s74332,s7321,s13629,s13311,s13626,s8965,s6406,s11386 chr14 105625872 105865458 - chr14 105860433 106851320 + s14437,s7321,s8830,s4847,s11386,s6413,s4845r2,s4845,s9578,s11750,s8832,s7321,s4847,s4847,s74092,s11338,s14442,s6413,s6413,s74092,s9579,s6409,s8614,s6409,s6731,s14437,s7217,s18020,s18017,s11743,s13416,s6730R,s11355,s13633,s13419,s8615,s11750,s6730,s8618,s9544,s7310,s8615,s8616,s7321,s5954,s9757,s13755,s8660,s7321,s8620,s11750,s8980,s11324,s18758,s4847,s11324,s13311,s8965,s9578,s8830,s13416,s8618,s14442,s8828,s13311,s74092,s7427,s7427r2,s6730R,s15681,s74092,s13298r1,s7427,s7427r2,s13755,s7431,s7427,s7427r2,s6722,s6413,s11341,s5934,s4954,s5934,s13420,s5934,s7310,s11341,s8660,s9775,s13754,s13768,s4958,s9772,s11326,s9064,s6406,s7247,s5934,s6406,s6413,s14437,s6729,s11818,s5948,s13749,s6727r1,s18007,s7321,s13428,s11394,s13299r1,s14442,s13299r1,s7247R,s8660,s74092,s6729R,s9063,s4958,s14455,s4958,s9589,s4958,s8607,s11326,s7217,s11324,s6730,s5950,s18024,s11818,s9597,s13299r1,s7250,s9758,s7426,s9772,s6731,s8979,s4845,s9775,s6722 chr14 20343075 20343409 - chr14 49586570 49586875 + chr14 20343075 20343409 - chr14 49586570 49586875 - prtcl/303 chr14 20343075 20343409 + chr14 49586570 49586875 + prtcl/355 chr14 20343075 20343409 - chr14 49862552 49862850 - chr14 20343075 20343409 + chr14 49862552 49862850 - prtcl/345 chr14 20343075 20343409 - chr14 49862552 49862850 + prtcl/416,349,329 chr14 25919546 25919547 - chr14 26126156 26126157 + new gene s6046,s11338,s11369,s11370,s11383,s11391,s11399,s11402,s11754,s13312,s13416,s13420,s13761,s13768,s18758,s20345,s7241,s7314,s7318,s8971,s9842,s9845 chr14 29725674 29725675 - chr14 29926965 29926966 + prtcl/007,016,024,032,033,038,141,147 chr14 29725674 29725675 - chr14 29927248 29927249 + prtcl/005,006,008,011,021,025,036,039,143 chr14 33055904 33055905 + chr14 33215426 33215427 - NPAS3 large circular (1) s6411 chr14 33215181 33215182 + chr14 33367268 33367269 - NPAS3 large circular (3) s7248,s11324,s11338,s13304,s13424,s13768,s14439,s5954,s8623,s8828,s9585,s9592,s9606,s9755,s9847 chr14 33215181 33215182 + chr14 33560210 33560211 - NPAS3 large circular (2) s13304 chr1 43593627 43593628 - chr1 43594215 43594216 - s4845,s6046,s6411,s6729,s6730,s6731,s7248,s7250,s10010,s10011,s10014,s11324,s11325,s11326,s11336,s11338,s11340,s11341,s11342,s11354,s11355,s11359,s11360,s11361,s11364,s11365,s11366,s11369,s11370,s11374,s11375,s11377,s11380,s11383,s11384,s11385,s11391,s11393,s11394,s11397,s11399,s11402,s11743,s11744,s11745,s11751,s11754,s11756,s11820,s13296,s13297,s13298r1,s13298r2,s13299r1,s13299r2,s13302,s13304,s13306,s13307,s13308,s13310,s13311,s13312,s13358,s13416,s13418,s13419,s13420,s13421,s13422,s13426,s13427,s13428,s13625,s13626,s13629,s13633,s13749,s13752,s13768,s14432,s14434,s14435,s14436,s14439,s14441,s14447,s14455,s14460,s14461,s15679,s15681,s18017,s18020,s18022,s18024,s18031,s18170,s18748,s18749,s18751,s18754,s18759,s20401,s20403,s4836,s4841,s4951,s4953,s4954,s4955,s4957,s4958,s4970,s5933,s5934,s5938,s5942,s5945,s5946,s5947,s5950,s5956,s6016,s6018,s6406,s6408,s6409,s6413,s6719,s6720,s6722,s6727r1,s7220,s7239,s7240,s7310,s7314,s7318,s7321,s74092,s7426,s7428,s7431,s74332,s7454,s8611,s8616,s8618,s8622,s8652,s8830,s8832,s8965,s8977,s8978,s8979,s8980,s8982,s8984,s9001,s9004,s9064,s9066,s9541,s9544,s9568,s9571,s9575,s9579,s9585,s9589,s9597,s9608,s9755,s9757,s9758,s9759,s9761,s9772,s9844,s9845 chr14 42980422 42980423 - chr14 43185163 43185164 + new gene s11338,s11342,s11359,s11360,s11377,s11378,s11380,s11402,s11744,s11745,s11820,s13304,s13306,s13308,s13424,s13426,s13427,s13631,s13752,s13755,s13770,s14437,s14439,s15679,s18007,s18151,s18748,s18754,s18758,s20400,s4953,s4954,s5947,s5964,s6418,s7239,s7241,s7314,s7318,s7454,s8607,s8614,s8618,s8971,s8977,s9001,s9544,s9596,s9599,s9608 chr14 43185223 43185224 - chr14 43473045 43473046 + new gene s6046,s11337,s11366,s11380,s11383,s11385,s11399,s11402,s11745,s11754,s11764,s11820,s13307,s13358,s13426,s13633,s13755,s14434,s14436,s14455,s15681,s18170,s20400,s5947,s5960,s6418,s7310,s7318,s7454,s8618,s8828,s8977,s9001,s9544,s9578,s9608 chr14 71413947 71413948 + chr14 71529370 71529371 - s10014,s13311,s13622,s13749,s14435,s14439,s5934,s6729,s6730,s6731,s7247,s7248,s7250,s7316,s8611,s8612,s8618,s8623,s9064,s9585,s9592,s9606,s9775 chr14 79697629 79697630 + chr14 79805190 79805191 - prtcl/025,038,140 chr15 39071608 39071609 - chr15 39420543 39420544 + prtcl/015,141,143,147,149 chr15 60678686 60678687 - chr15 61229052 61229053 + prtcl/004,005,006,007,011,014,016,020,021,025,026,032,037,039,040,125,145,147,149 chr15 71411700 71411830 - chr15 71660520 71660615 + prtcl/038,145,005,039,147,143,125,014,020,035,037,149 chr1 61088148 61088149 + chr1 61277585 61277586 - circular>1mb s13768,s14432,s14436,s5960,s7318,s74092,s8616,s8828,s9066,s9067,s9596,s9761,s9844 chr1 61088148 61088149 + chr1 61359274 61359275 - circular>1mb s8618,s9579 chr16 11020192 11020193 + chr16 11126146 11126147 - prtcl/021,031,037,125 chr16 78432752 78432753 - chr16 78779328 78779329 + s8971,s11754,s8971,s10011,s11324,s11326,s11336,s11341,s11342,s11355,s11359,s11365,s11368,s11370,s11374,s11377,s11380,s11383,s11384,s11385,s11391,s11399,s11744,s11750,s11751,s11754,s11760,s13296,s13297,s13298r2,s13299r1,s13299r2,s13304,s13418,s13420,s13424,s13427,s13619,s13622,s13625,s13629,s13631,s13632,s13633,s13749,s13755,s13768,s13770,s13771,s14432,s14434,s14435,s14437,s14441,s14442,s14455,s14461,s15680,s15681,s18017,s18020,s18022,s18037,s18259,s18730,s18749,s18751,s18758,s18759,s20345,s20401,s20405,s4836,s4841,s4845,s4951,s4955,s4958,s4970,s4975,s5938,s5942,s5946,s5947,s5948,s5950,s5954,s5964,s6018,s6046,s6408,s6409,s6411,s6413,s6418,s6684,s6722,s6729,s6730,s6731,s7240,s7241,s7247,s7248,s7249,s7250,s7314,s7321,s74092,s7427,s7427r2,s7428,s7431,s7454,s8607,s8612,s8615,s8616,s8618,s8622,s8623,s8660,s8830,s8832,s8965,s8971,s8978,s8980,s8981,s8982,s8984,s9004,s9063,s9064,s9065,s9066,s9464,s9568,s9571,s9575,s9578,s9579,s9585,s9596,s9606,s9758,s9772,s9775,s9842,s9844,s9845,s9847 chr16 78432752 78432753 - chr16 79211607 79211608 + WWOX-WWOX (1) s4845,s6046,s6411,s6729,s6730,s6731,s7247,s7248,s7249,s7250,s10011,s11324,s11326,s11336,s11341,s11342,s11355,s11359,s11365,s11368,s11370,s11374,s11377,s11380,s11383,s11384,s11385,s11391,s11399,s11744,s11750,s11751,s11754,s11760,s13296,s13297,s13298r2,s13299r1,s13299r2,s13304,s13418,s13420,s13424,s13427,s13619,s13622,s13625,s13629,s13631,s13632,s13633,s13749,s13755,s13768,s13770,s13771,s14432,s14434,s14435,s14437,s14441,s14442,s14455,s14461,s15680,s15681,s18017,s18020,s18022,s18037,s18259,s18730,s18749,s18751,s18758,s18759,s20345,s20401,s20405,s4836,s4841,s4951,s4955,s4958,s4970,s4975,s5938,s5942,s5946,s5947,s5948,s5950,s5954,s5964,s6018,s6408,s6409,s6413,s6418,s6684,s6722,s7240,s7241,s7314,s7321,s74092,s7427,s7427r2,s7428,s7431,s7454,s8607,s8612,s8615,s8616,s8618,s8622,s8623,s8660,s8830,s8832,s8965,s8971,s8978,s8980,s8981,s8982,s8984,s9004,s9063,s9064,s9065,s9066,s9464,s9568,s9571,s9575,s9578,s9579,s9585,s9596,s9606,s9758,s9772,s9775,s9842,s9844,s9845,s9847 chr16 82627001 82627138 - chr16 83032009 83032132 + CDH13 missing exon (1) s8978,s8611,s9597,s7248,s13761,s13424,s6728,s11366,s5933,s7310,s13428,s9772,s14436,s7240,s11745,s11370,s4951,s7241,s13622,s13304,s14437,s10011,s13306,s15681,s6727r1,s6406,s6731,s11378,s7314,s9844,s8616,s9544,s11364,s11393,s18037,s9001,s13633,s5956,s8965,s9845,s13771,s8607 chr16 82627045 82627138 - chr16 82858361 82858451 + CDH13 missing exon (2) s13622,s14439,s4975,s8614,s11354,s7426,s74332,s8832,s8623 chr16 85357643 85357644 - chr16 85648551 85648552 + prtcl/006,013,020,025,125 chr18 4151282 4151283 - chr18 4455005 4455006 + prtcl/001,003,004,005,007,008,011,013,014,015,016,019,020,021,022,025,032,033,035,036,037,038,039,125,141,143,145,147,149 chr18 58044532 58044709 - chr18 58245426 58245442 + prtcl/147,007,039 chr18 7567891 7567892 - chr18 7774148 7774149 + prtcl/003,015,020 chr1 92563641 92563642 + chr1 92704744 92704745 - prtcl/008,015,026,032,040 chr20 14002330 14085729 - chr20 14684842 14684924 + MACROD2-MACROD2 (1) s0405,s063,s1340,s1369,s1394,s1399,s1402,s239,s310,s318,s3296,s3297,s3629,s4442,s614,s622,s719,s7247,s727r1,s8037,s8170,s8749,s982 chr20 53256404 53256445 - chr20 53487143 53487287 + TSHZ2-TSHZ2 s10011,s11324,s11325,s11326,s11338,s11341,s11355,s11370,s11375,s11385,s11386,s11393,s11743,s11762,s13296,s13304,s13306,s13308,s13310,s13311,s13358,s13416,s13419,s13420,s13421,s13422,s13625,s13626,s13631,s13633,s13749,s13766,s13768,s13770,s14434,s14436,s14437,s14447,s14455,s14460,s15679,s15680,s18017,s18020,s18022,s18031,s18037,s18151,s18259,s18730,s18754,s18758,s20342,s20401,s20403,s4833,s4836,s4845,s4951,s4953,s4955,s4957,s4970,s5930,s5938,s5942,s5947,s5948,s5954,s5960,s5961,s6018,s6046,s6408,s6409,s6413,s6684,s6722,s6727r1,s6729,s6730,s6731,s6732,s6733,s7211,s7238,s7241,s7247,s7248,s7250,s7310,s7409r2,s7428,s7431,s7433r2,s8611,s8612,s8614,s8615,s8616,s8618,s8622,s8623,s8652,s8828,s8832,s8965,s8971,s9063,s9064,s9065,s9066,s9067,s9473,s9568,s9575,s9578,s9579,s9584,s9585,s9597,s9757,s9758,s9761,s9775 chr20 8132750 8132751 - chr20 8371381 8371382 + PLCB1-PLCB1 (1) prtcl/025,026 chr20 8150371 8150372 - chr20 8371381 8371382 + PLCB1-PLCB1 (1) prtcl/001,004,024 chr20 8371450 8371451 - chr20 8628293 8628294 + PLCB1-PLCB1 (1) 031,152,141 chr21 26001836 26001837 - chr21 26002391 26002392 - s4833,s4845,s6411,s6729,s6730,s7247,s7248,s7250,s10010,s10011,s10014,s11337,s11354,s11355,s11357,s11360,s11361,s11364,s11366,s11367,s11377,s11380,s11385,s11386,s11391,s11393,s11394,s11402,s11743,s11744,s11750,s11751,s11754,s11756,s11760,s13296,s13298r1,s13298r2,s13299r1,s13302,s13307,s13308,s13310,s13311,s13416,s13421,s13424,s13427,s13428,s13623,s13625,s13626,s13633,s13749,s14434,s14447,s14455,s14460,s15679,s15680,s15681,s18020,s18751,s18754,s18759,s20345,s20401,s20405,s4841,s4951,s4953,s4975,s5938,s5947,s5950,s5961,s6408,s6409,s6418,s6720,s6727r1,s6733,s7211,s7217,s7238,s7241,s7310,s7316,s7318,s7431,s7433,s7454,s8611,s8612,s8616,s8622,s8623,s8652,s8660,s8832,s8965,s8971,s8977,s8978,s8979,s8982,s8984,s9001,s9064,s9065,s9544,s9578,s9597,s9757,s9758 chr21 26001843 26001844 + chr21 26002385 26002386 + s4833,s4845,s6411,s6729,s6730,s6731,s7247,s7248,s7250,s10010,s10011,s10014,s11324,s11325,s11326,s11337,s11338,s11342,s11354,s11355,s11359,s11360,s11361,s11364,s11366,s11367,s11368,s11369,s11370,s11374,s11375,s11377,s11378,s11380,s11383,s11384,s11385,s11386,s11391,s11394,s11397,s11399,s11402,s11743,s11744,s11745,s11750,s11751,s11754,s11756,s11760,s11762,s11764,s11818,s11820,s13297,s13298r1,s13298r2,s13299r1,s13299r2,s13302,s13304,s13306,s13307,s13308,s13310,s13311,s13312,s13416,s13418,s13419,s13420,s13421,s13422,s13424,s13426,s13427,s13428,s13619,s13622,s13623,s13625,s13629,s13631,s13633,s13749,s13768,s13770,s14432,s14434,s14436,s14437,s14439,s14441,s14442,s14447,s14455,s14460,s14461,s15679,s15680,s15681,s18017,s18020,s18024,s18031,s18037,s18151,s18170,s18259,s18730,s18734,s18748,s18749,s18751,s18754,s18758,s18759,s20400,s20401,s20403,s20405,s4841,s4953,s4954,s4955,s4957,s4958,s4970,s4975,s5930,s5932,s5933,s5938,s5942,s5945,s5947,s5948,s5954,s5960,s6016,s6406,s6408,s6409,s6418,s6684,s6719,s6720,s6722,s6727r1,s6727r2,s6728,s6732,s7217,s7220,s7239,s7241,s7310,s7314,s7316,s7318,s7321,s7409,s7428,s7431,s7433,s8611,s8612,s8614,s8615,s8616,s8620,s8652,s8660,s8828,s8830,s8965,s8971,s8977,s8978,s8979,s8980,s8981,s8982,s8984,s9001,s9004,s9063,s9064,s9066,s9067,s9473,s9541,s9568,s9575,s9578,s9579,s9585,s9589,s9592,s9597,s9606,s9608,s9754,s9755,s9757,s9758,s9759,s9761,s9772,s9775,s9777,s9844,s9845 chr21 35580929 35580930 - chr21 35814945 35814946 + s18017,s18031,s6018,s7220,s9575,s9579,s7248,s10011,s18031,s6722,s7321,s9568,s9758,s9777 chr2 13609161 13609162 - chr2 13837689 13837690 + prtcl/001,003,004,005,006,007,008,011,013,015,016,019,020,022,024,025,032,033,036,037,038,039,125,141,143,145,147,149 chr2 138299537 138299538 - chr2 138500754 138500755 + prtcl/006,014,022,024,036,143,147,151 chr2 186215090 186215091 - chr2 186456714 186456715 + prtcl/003,004,011,015,019,022,024,025,032,036,037,125,143,145 chr2 197805339 197805340 - chr2 198088857 198088858 + PLCL1-PLCL1 (1) prtcl/006,014,024 chr22 22026122 22713198 - chr22 22893779 22922721 + interesting-region s4083,s4845,s6411,s6730,s6731,s7247,s7250,s10010,s10011,s10014,s11324,s11325,s11326,s11338,s11341,s11355,s11375,s11384,s11386,s11393,s11399,s11743,s11817,s11818,s13298r1,s13298r2,s13299r1,s13299r2,s13304,s13306,s13311,s13358,s13416,s13418,s13419,s13421,s13426,s13427,s13428,s13622,s13626,s13629,s13631,s13633,s13749,s13768,s13769,s13770,s14436,s14441,s14442,s14455,s14460,s14461,s15679,s15680,s15681,s18017,s18020,s18022,s18031,s18151,s18255,s18259,s18730,s18749,s18754,s18758,s20344,s4836,s4841,s4951,s4954,s4955,s4957,s4958,s5930,s5934,s5938,s5942,s5947,s5948,s5950,s5954,s5956,s5961,s6016,s6018,s6408,s6409,s6413,s6684,s6727r1,s7238,s7240,s7310,s7314,s7321,s7409r2,s7426,s7431,s7433r2,s8611,s8616,s8618,s8620,s8828,s8971,s8980,s8982,s8984,s9001,s9063,s9064,s9066,s9464,s9473,s9541,s9544,s9568,s9575,s9578,s9579,s9582,s9585,s9589,s9597,s9599,s9608,s9755,s9757,s9758,s9761,s9770,s9772,s9777 chr22 22099211 22099212 - chr22 22904989 22904990 + s11750,s13296,s18017,s18022,s18759,s4955,s4958,s4970,s6016,s8611,s8618,s8623,s9063,s9066,s9578,s9772,s5950 chr22 22322793 22322973 - chr22 22893779 22922592 + s11336,s6408,s6046,s6411,s11386,s5930,s5934,s7240,s8971,s8828,s9758,s7433,s6729,s9063,s9845,s10011,s11324,s13424,s15680,s4836,s4955,s5964,s6684,s7431,s8618,s8622,s8652,s8660,s8830,s8982,s9473,s9575,s9777,s13298r1,s13769,s8980,s9064,s13358,s5950,s11750,s18754,s14434,s13426,s9578,s14437,s9608,s9606,s13755,s9066,s5961,s8623,s11341,s13622,s13768,s8965,s7250,s11338,s11374,s13629,s13749,s15681,s18758,s5948,s5954,s9584,s13428,s11355,s11397,s11745,s13311,s13419,s18022,s18748,s20342,s4951,s9001,s9585,s9589,s6018,s9772,s13420,s9067,s6408,s9568,s6413 chr22 22343490 22395491 - chr22 22893781 22906373 + s13622,s7433a2,s7427,s7427r2,s9579,s9464,s9777,s13298r1,s13298r2,s13769,s4954,s7240,s5930,s9473,s6727r1,s11384,s13420,s9608,s13426,s20401,s8982,s13302,s8614,s9597,s4958,s13428,s9772,s9473,s4955,s11324,s5961,s9775,s11745,s6408 chr22 22410125 22410287 - chr22 22893780 22921398 + s4836,s14434,s13416,s13419,s13749,s18748,s4970,s9578,s9597,s9608,s9757,s13768,s14442,s18031,s10011,s13298r1,s8984,s6729,s5950,s15679,s8832 chr22 22410281 22410282 - chr22 22893782 22893783 + s11324,s11338,s11393,s11399,s13304,s13311,s13426,s13754,s18017,s20345,s4083,s48452,s4955,s4958,s5954,s5961,s6016,s6729,s7431,s74332,s8614,s8618,s8623,s9067,s9758,s9845 chr22 32814337 32814338 + chrX 17050119 17050120 + s11378,s11385,s11744,s11751,s11760,s13310,s14434,s14461,s18017,s18022,s18024,s5938,s8620,s8978 chr2 61905739 61905859 - chr2 62135830 62135955 + COMMD1-COMMD1 (1) s11338,s11359,s13422,s13623,s13761,s20405,s4833,s5947,s6729,s7239,s7250,s8660,s9004,s9063,s9473,s9541,s9578,s9589,s9772,s9844 chr2 88857072 88861996 - chr2 88886151 90248408 - IG Kappa Light Chain chr2 88857072 88861996 - chr2 88886151 90248408 + IG Kappa Light Chain chr2 88857241 88860606 - chr2 89085174 89330117 + s13420,s6411a,s6727r1,s8622,s11393,s15681,s20401,s5942,s4975,s9067,s13754,s13632,s11399,s13416,s7427,s7427r2,s9584,s13426,s11341,s9770,s9599,s6411,s6018,s11818,s8980,s18259,s13632,s9066,s6728,s11399,s7239,s4954,s5945,s18020,s18748,s5954,s5950,s13426,s8623,s15680,s7248a,s5961,s13427,s4975,s7314,s9064,s7250a,s13298r2,s14435,s10010,s9754,s9464,s6728,s13421,s7314,s4975,s9584,s9754,s8616,s8979 chr2 88857317 88861924 - chr2 88885620 90221313 - s11760,s13427,s11360,s9847,s6418,s6719,s13307,s4970,s11370,s20342,s9759,s13622,s4970,s9775,s5948,s6018,s6411,s8660,s4975,s6731,s7426,s20344,s9541,s13419,s13632,s13416,s9596,s11399,s8612,s8623,s7426,s7316,s7321,s4955,s8611,s11374,s18020,s74332,s7211,s8612,s5964,s8980,s14442,s6018,s20345,s6406,s7426,s5930,s5942,s74092,s11374,s8618,s7211,s6409,s9777,s13418,s9772,s5930,s13768,s6731,s13419,s13419 chr2 97194725 97194726 + chr2 97547535 97547536 + s6411,s6729,s10011,s11326,s11336,s11340,s11367,s11383,s11386,s11751,s13299r1,s13416,s14447,s18020,s18022,s18031,s18170,s18759,s20404,s6016,s8652,s8965,s8980,s9575,s9589,s9759,s9772 chr2 99752301 99752302 - chr2 100006631 100006632 + s11337a,s11393a,s11399a,s13358a,s13755a,s14447a,s4957a,s5950a,s7318a,s8828a,s8971a chr2 99837476 99837477 + chr2 100011571 100011572 - s11354a,s11399a,s11745a,s13766a,s14435a,s14439a,s14461a,s15681a,s18748a,s4953a,s9063a,s9464a,s9589a,s9754a,s9755a,s9845a chr3 114380216 114380217 + chr3 114900342 114900343 - prtcl/007,013,019,021,025,037,038,125 chr3 114693527 114693528 + chr3 114900342 114900343 - ZBTB20 large circular(1) prtcl/005,007,126 chr3 116086434 116086557 - chr3 116442541 116442542 + prtcl/025,031 chr3 116086434 116086557 - chr3 116444876 116444892 + prtcl/004,005,007,008,011,013,019,032,125,141,143,145,149 chr3 116444955 116444956 - chr3 117997181 117997182 + prtcl/003,005,006,007,008,011,013,015,016,020,021,022,024,025,031,032,033,035,036,037,038,039,040,125,143,145,147 chr3 117729179 117729180 - chr3 117997181 117997182 + prtcl/007,016,025,032,125,143 chr3 131723625 131723626 - chr3 132034566 132034567 + prtcl/001,003,004,005,007,011,015,016,019,022,024,026,033,036,037,038,039,040,141,143,145,147,149 chr3 131723625 131723626 - chr3 132037556 132037557 + CPNE4-CPNE4 prtcl chr3 132040321 132040322 - chr3 132259660 132259661 + prtcl/039,011,014,015,024,026,032,036,037,040,141,147 chr3 132040321 132040322 - chr3 132259783 132259784 + prtcl/011,014,015,024,026,032,036,037,040,141,147,151 chr3 132044500 132044501 - chr3 132259783 132259784 + prtcl/001,013,022,025,031,038,143,145,149 chr3 174859353 174864091 - chr3 175096789 175096897 + s4957,s6729,s6731,s7249,s10011,s11337,s11338,s11341,s11359,s11367,s11370,s11378,s11383,s11385,s11397,s11399,s11745,s13306,s13312,s13420,s13426,s13629,s13769,s14437,s14439,s14447,s14460,s15680,s18037,s18255,s18748,s20404,s4836,s4847,s5930,s5932,s5934,s5938,s5964,s6418,s6722,s7217,s7220,s7238,s7316,s7431,s8623,s8828,s8971,s8978,s9064,s9066,s9541,s9579,s9584,s9596,s9597,s9761,s9842,s9844,s9845,s13771,s13755,s13752,s6411,s9754,s13749,s6733,s13299r1,s6409 chr3 175096789 175096790 + chr3 175324325 175324326 - prtcl/001,026,147 chr3 188153363 188154253 - chr3 188406111 188406231 + LPP-LPP (1) s10010,s10011,s10014,s11324,s11325,s11338,s11364,s11365,s11368,s11383,s11386,s11393,s11394,s11397,s11743,s11744,s11745,s11750,s11751,s11756,s11817,s13296,s13297,s13298r2,s13299r1,s13299r2,s13302,s13304,s13306,s13308,s13310,s13311,s13312,s13358,s13416,s13419,s13421,s13422,s13619,s13622,s13623,s13626,s13633,s13752,s13755,s13761,s13768,s13770,s14432,s14434,s14435,s14439,s14441,s14447,s14460,s15680,s15681,s18017,s18020,s18022,s18024,s18031,s18151,s18259,s18730,s18748,s18754,s18758,s18759,s20404,s4083,s4833,s4836,s4841,s4847,s4955,s4970,s5930,s5932,s5934,s5945,s5947,s5956,s6016,s6046,s6411,s6413,s6727r1,s6730,s6731,s7220,s7238,s7241,s7247,s7248,s7250,s7314,s7318,s7321,s7426,s7427,s7427r2,s8612,s8614,s8618,s8652,s8828,s8965,s8971,s8977,s8982,s9001,s9004,s9064,s9067,s9473,s9568,s9575,s9579,s9585,s9589,s9592,s9597,s9608,s9757,s9844 chr3 78938927 78938928 - chr3 79589823 79589824 + prtcl/024,025,026,038 chr3 84959668 84959669 - chr3 85802046 85802047 + prtcl/001,011,022,024,025,026,037,038,149 chr3 99818042 99818044 - chr3 100146972 100146976 + CMSS1-CMSS1 (1) s4845,s11378,s13299r1,s4975,s5942,s5945,s9758,s6729,s6730,s11325,s13298r2,s13299r2,s13428,s13623,s13626,s13749,s14432,s14460,s18020,s18022,s18037,s18151,s18759,s20344,s5934,s7238,s7318,s8652,s8660,s8965,s8980,s9004,s9064,s9065,s9571,s9575,s9757,s9761 chr4 14477458 14477459 - chr4 14700742 14700743 + novel gene s11337,s11338,s11360,s11369,s11370,s11377,s11383,s11384,s11393,s11743,s11818,s13306,s13307,s13308,s13312,s13358,s13416,s13626,s13629,s13755,s13768,s13769,s13770,s14432,s14435,s14436,s14439,s14441,s14455,s14461,s15679,s18007,s18024,s20345,s4954,s5946,s5956,s7238,s7318,s7433,s8608,s8622,s8828,s9464,s9541,s9589,s9596,s9597,s9757,s9759,s9761,s9844,s9845,s9847 chr4 30920261 30920370 - chr4 31142472 31142473 + s9579,s11324,s74332,s9597,s4833,s6046,s11364,s11377,s11754,s11817,s11819,s13304,s13358,s13416,s13422,s13426,s13625,s13626,s13629,s13631,s13749,s13768,s13771,s14432,s14436,s14437,s18022,s18749,s18751,s18759,s4970,s7239,s7310,s74092,s7428,s7454,s8614,s8615,s8652,s9004,s9473,s9575,s9584,s9592 chr4 61201765 61201766 - chr4 61497120 61497121 + prtcl/306,314,329 chr4 61934839 61934840 + chr4 62044549 62044550 - prtcl/306,314,347 chr4 94875900 94875901 - chr4 95104407 95104408 + prtcl/001,003,005,007,011,024,025,033,038,039,141,143,145,147,149 chr5 137140595 137140700 - chr5 137498365 137498425 + prtcl/011,143,005,040,036,141 chr5 137267050 137267060 - chr5 137498365 137498425 + prtcl/001,015,033,035,125,145,149 chr5 155728990 155728991 - chr5 156123855 156123856 + prtcl/007,011,013,022,038 chr5 155870424 155870425 - chr5 156123855 156123856 + prtcl/024,125,147,151 chr5 59215968 59215969 - chr5 59893167 59893168 + PDE4D-PDE4D (1) s13312,s7248,s7250,s10014,s11341,s11357,s11366,s11391,s13296,s13298r1,s13299r1,s13299r2,s13312,s13416,s13418,s13420,s13633,s13768,s14455,s18017,s18749,s18758,s20345,s4975,s5934,s6409,s6727r1,s6727r2,s6728,s6732,s7217,s7426,s8611,s8616,s8652,s8965,s8982,s9001,s9064,s9568,s9575,s9579,s9585,s9592,s9758,s9842,s9844,s9847 chr5 59215968 59215969 - chr5 59988487 59988488 + prtcl/001,003,004,005,011,014,015,016,019,021,022,024,032,036,037,039,125,141,143,145,147,149 chr5 59382411 59382412 - chr5 59768246 59768247 + PDE4D-PDE4D (2) s11355,s5961 chr5 59382411 59382412 - chr5 59988487 59988488 + PDE4D-PDE4D (3) s13299r1,s13299r2,s14455,s20345 chr5 59685943 59685944 - chr5 59988487 59988488 + PDE4D-PDE4D (4) s11366,s11819,s14455,s6727r1,s6728,s8965,s9064 chr5 60185687 60185688 - chr5 60487943 60487944 + PDE4D-PDE4D (5) s6729,s7248,s10014,s11357,s11366,s18749,s4975,s5942,s5948,s6727r1,s8965,s9064,s9842 chr6 16522626 16522627 + chr6 16753347 16753348 - ATXN1 large circular (1) prtcl/008,125,004,032,038,039,151,152 chr6 16585779 16585780 + chr6 16753347 16753348 - ATXN1 large circular (2) prtcl/008,125,004,032,038,039,151,152 chr6 16585779 16585780 + chr6 16754091 16754092 - ATXN1 large circular (3) prtcl/008,125,004,032,038,039,151,152 chr6 1726512 1726513 - chr6 1930102 1930103 + GMDS-GMDS (1) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 1726512 1726513 - chr6 1959866 1959867 + GMDS-GMDS (2) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 1742511 1742512 - chr6 1959890 1959891 + GMDS-GMDS (3) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 1742586 1742587 - chr6 1952031 1952032 + GMDS-GMDS (4) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 1742586 1742587 - chr6 1959866 1959867 + GMDS-GMDS (5) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 1742586 1742587 - chr6 1959867 1959868 + GMDS-GMDS (6) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 1742586 1742587 - chr6 1959891 1959892 + GMDS-GMDS (7) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 1742586 1742587 - chr6 2115770 2115771 + GMDS-GMDS (8) s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772 chr6 20781144 20781145 + chr6 20955585 20955586 - CDKAL1 large circular (1) s4833,s4845,s6730,s7248,s7250,s11394,s13304,s13428,s13749,s13770,s14437,s15680,s15681,s4841,s4975,s5942,s6408,s6727r1,s6727r2,s6728,s7427,s7427r2,s7428,s8618,s9001,s9592 chr6 20781144 20781145 + chr6 21065228 21065229 - CDKAL1 large circular (2) s11819,s8612,s8982,s10014,s13297,s15679,s5948 chr6 37820016 37820017 - chr6 38061592 38061593 + s10011,s10014,s11324,s11325,s11338,s11360,s11364,s11377,s11386,s11393,s11402,s11745,s11751,s11760,s13297,s13298r1,s13298r2,s13299r1,s13302,s13304,s13306,s13307,s13308,s13310,s13311,s13312,s13358,s13418,s13420,s13421,s13422,s13424,s13426,s13625,s13626,s13632,s13633,s13749,s13752,s13754,s13755,s13761,s13770,s13771,s14434,s14435,s14447,s14461,s15679,s15681,s18017,s18020,s18022,s20401,s20403,s20404,s4841,s5930,s5934,s5938,s5942,s5946,s5950,s5961,s6046,s6409,s6722,s6727r1,s6730,s6731,s7239,s7241,s7247,s7248,s7318,s7321,s7431,s7433,s8614,s8615,s8618,s8623,s8652,s8660,s8828,s8965,s8971,s8977,s8982,s9001,s9063,s9064,s9067,s9568,s9575,s9579,s9585,s9597,s9606,s9608,s9755,s9761,s9844 chr6 87506448 87507940 - chr20 53404941 53405106 - SLC35A1-TSHZ2 s10010,s11338,s11364,s11375,s11378,s11384,s11743,s11750,s11751,s11760,s11764,s13296,s13302,s13308,s13311,s13416,s13421,s13623,s13626,s13629,s13631,s13768,s13770,s15680,s18020,s18031,s18037,s18170,s18759,s4833,s4954,s4970,s4975,s5938,s5946,s6016,s6411,s7318,s7433r2,s8965,s8979,s9761,s9772 chr6 87506448 87507940 + chr20 53404941 53405106 + SLC35A1-TSHZ2 s10010,s11338,s11364,s11375,s11378,s11384,s11743,s11750,s11751,s11760,s11764,s13296,s13302,s13308,s13311,s13416,s13421,s13623,s13626,s13629,s13631,s13768,s13770,s15680,s18020,s18031,s18037,s18170,s18759,s4833,s4954,s4970,s4975,s5938,s5946,s6016,s6411,s7318,s7433r2,s8965,s8979,s9761,s9772 chr7 11636961 11636962 - chr7 12094652 12094653 + prtcl/008,025,151 chr7 146116973 146116974 - chr7 146774270 146774271 + prtcl/001,003,004,005,007,008,011,013,015,016,019,020,021,022,024,025,032,033,037,038,039,040,125,141,143,145,147,149 chr7 157682756 157682938 - chr7 157898670 157898700 + prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147 chr7 157682756 157682938 - chr7 158081290 158081325 + prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147 chr7 158205210 158205280 - chr7 158587550 158587620 + prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147 chr7 158316800 158316940 - chr7 158587550 158587620 + prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147 chr7 18162349 18162350 - chr7 18496261 18496262 + HDAC9-HDAC9 (1) s11743,s13416,s13424,s13428,s13770,s13771,s14434,s14436,s4955,s5954,s6413,s8614,s8623,s8982,s9582,s9592 chr7 26201744 26201769 + chr15 40561980 40562772 + s11324,s11338,s11354,s11365,s11384,s11385,s11386,s11744,s11750,s11751,s11756,s11764,s11819,s13296,s13297,s13311,s13312,s13418,s13422,s13424,s13428,s13622,s13768,s13770,s14432,s14435,s14436,s14439,s14441,s15679,s15680,s15681,s18017,s18020,s18022,s18024,s18259,s18730,s18749,s18751,s18759,s4845,s5933,s5961,s6046,s6413,s6722,s6730,s6731,s7240,s7310,s7318,s7321,s7409r2,s7427,s7427r2,s7431,s8614,s8618,s8620,s8623,s8660,s8828,s8830,s8965,s8982,s8984,s9064,s9066,s9473,s9589,s9592,s9596,s9597,s9606,s9757,s9758,s9761,s9772,s9775,s6730 chr7 55773180 55773181 + chr7 56021118 56021119 + prtcl/007,026,140,143,145 chr7 67304075 67304236 + chr7 102378887 102378888 + s8984,s13296,s13619,s13631,s14434,s18734,s18751,s8622,s8830,s13629,s13422,s13632,s18748,s7239,s7318,s8616,s9066,s18730,s14442,s18758 chr7 67304407 67304444 - chr7 102378674 102378875 - s6411,s11394,s11754,s11756,s13297,s13626,s18748,s18751,s9063,s13304,s8616,s13311 chr9 123757702 123757703 + chr9 123879021 123879022 - prtcl/003,007,011,038,040,125,140,141 chr9 17933025 17933026 - chr9 18163861 18163862 + prtcl/329,345,349,383 chr9 41230099 41235015 - chr9 63818084 63823161 - s132981,s15679,s11377,s11764,s13625,s11754,s6411,s11377,s13304,s18022,s11764,s13625,s15681,s11762,s18748,s13296,s18024,s4958,s8984,s9770,s15681,s9606,s6721,s8608,s13626,s4970 chr9 41254111 41254122 + chr9 62818021 62818478 - s11751,s11377,s7428,s13297,s6411-,s18037,s11384,s13298r2,s10010,s18024,s11360,s13298r1,s13625,s8652,s14455,s18017,s11380,s4953,s18031,s9589 chr9 9442088 9442294 + chr9 35657753 35657995 + chr9 9442088 9442294 - chr9 35657753 35657995 - prtcl/347 chrX 124963817 124963818 - chrX 125184707 125184708 + prtcl/004,005,006,007,008,011,014,015,019,022,024,025,032,033,036,037,038,039,040,125,140,143,145,149,151 chr3 65622088 65622089 - chr3 65902596 65902597 + prtcl chr3 65622088 65622089 - chr3 66037995 66037996 + prtcl chr3 65745588 65745589 - chr3 66037995 66037996 + prtcl chr3 76311417 76311418 - chr3 77098013 77098014 + prtcl chr3 107129992 107129993 - chr3 107482199 107482200 + prtcl chr3 114500351 114500352 + chr3 114900342 114900343 - ZBTB20-ZBTB20 prtcl chr3 116801300 116801301 - chr3 117997181 117997182 + prtcl chr3 117009374 117009375 - chr3 117997181 117997182 + prtcl chr3 117339787 117339788 - chr3 117997181 117997182 + prtcl chr3 131989516 131989517 + chr3 131994540 131994541 + suspected mistake in ref genome prtcl chr3 132040321 132040322 - chr3 132267464 132267465 + new gene prtcl chr3 132040321 132040322 - chr3 132320573 132320574 + new gene prtcl chr3 132044500 132044501 - chr3 132267464 132267465 + new gene prtcl chr3 132044500 132044501 - chr3 132320573 132320574 + new gene prtcl chr3 136398748 136398749 + chr3 136502779 136502780 - STAG1 large circular prtcl chr3 140176073 140176074 - chr3 140385560 140385561 + CLSTN2 splice variant prtcl chr3 140176073 140176074 - chr3 140403628 140403629 + CLSTN2 splice variant prtcl chr3 160756707 160756708 - chr3 160961735 160961736 + PPM1L splice variant prtcl chr3 172112451 172112452 + chr3 172251541 172251542 - FNDC3B large circular prtcl chr3 175096789 175096790 + chr3 175256530 175256531 - NAALADL2 large circular prtcl chr3 188225527 188225528 - chr3 188484591 188484592 + LPP splice variant prtcl chr3 188406111 188406112 + chr3 188524787 188524788 - LPP large circular prtcl chr3 2098978 2098979 - chr3 2571415 2571416 + CNTN4 splice variant chr3 2099630 2099631 - chr3 2339177 2339178 + CNTN4 new exon splice variant chr3 71299819 71299820 + chr3 71493555 71493556 - FOXP1 large circular chr3 71359244 71359245 - chr3 71581548 71581549 + FOXP1 splice variant chr3 85511898 85511899 - chr3 85802046 85802047 + CADM2 splice variant chr4 147847150 147847151 + chr4 147955374 147955375 - ARHGAP10 large circular (1) chr4 147857552 147857553 + chr4 147966839 147966840 - ARHGAP10 large circular (2) chr4 28215148 28215149 - chr4 28476449 28476450 + new gene chr4 94875830 94875831 + chr4 94996134 94996135 - BMPR1B large circular (1) chr4 95335552 95335632 - chr4 95548733 95548751 + UNC5C-UNC5C prtcl/015,040,016 chr5 107427509 107427510 - chr5 107669641 107669642 + EFNA5-EFNA5 chr5 108021001 108021002 - chr5 108224120 108224121 + FBXL17-FBXL17 chr5 108186116 108186117 + chr5 108348530 108348531 - FBXL17-FBXL17 large circular (1) chr5 156124019 156124020 - chr5 156344488 156344489 + prtcl/015,039,147,151 chr5 165007412 165007413 - chr5 165348897 165348898 + prtcl/007,013,015,024,032,126,141,143,147,148,151 chr5 165778074 165778075 - chr5 166083747 166083748 + new gene prtcl/141 chr5 165778074 165778075 - chr5 166104099 166104100 + new gene prtcl/015 chr5 165778074 165778075 - chr5 166218189 166218190 + new gene prtcl/126 chr5 167073356 167073357 - chr5 167284763 167284764 + new gene prtcl/001,032,141,151 chr5 168883336 168883337 - chr5 169193478 169193479 + SLIT3-SLIT3 (1) chr5 59215830 59215975 - chr5 59768246 59768265 + PDE4D-PDE4D prtcl/147,008,151,026,152 chr5 59468435 59468436 - chr5 59988487 59988488 + PDE4D-PDE4D prtcl/021,022,147,151 chr5 60278164 60278165 - chr5 60487941 60487942 + PDE4D-PDE4D/PART1 prtcl/005,141,147,149 chr5 88905208 88905209 + chr5 89095029 89095030 - MAF2C-AS1 circular chr6 110667433 110667434 + chr6 110773937 110773938 - CDK19 circular chr6 156829226 156829227 + chr6 156935576 156935577 - ARID1B circular chr6 16485971 16485972 + chr6 16754746 16754747 - ATXN1 circular new exon chr6 16522626 16522627 + chr6 16657901 16657902 - ATXN1 circular chr6 20781144 20781145 + chr6 21000372 21000373 - CDKAL1 circular chr7 110663721 110663722 - chr7 110886592 110886593 + IMMP2L-IMMP2L chr7 110663721 110663722 - chr7 110963499 110963500 + IMMP2L-IMMP2L chr7 110663450 110963566 - chr7 111417258 111417259 + IMMP2L-IMMP2L chr7 122663569 122663570 - chr7 122885998 122885999 + CADPS2-CADPS2 chr7 146839820 146839855 - chr7 147043910 147043940 + prtcl/151,039,025 chr7 71132830 71133045 - chr7 71335540 71335580 + prtcl/008,144,039,126,149" chr8 127006618 127006619 - chr8 127339280 127339281 + prtcl/004,143 chr8 140024079 140024080 - chr8 140252776 140252777 + TRAPPC9-TRAPPC9 chr8 140761164 140761165 + chr8 140890769 140890770 - PTK2 circular (1) chr8 140789473 140789474 + chr8 140890769 140890770 - PTK2 circular (2) chr8 19506130 19506131 - chr8 19757185 19757186 + CSGALNACT1 new exon chr8 42906172 42906173 + chr8 43018494 43018495 - HOOK3 large circular chr9 10033790 10033791 - chr9 10340962 10340963 + PTPRD-PTPRD chr9 10033790 10033791 - chr9 10612397 10612398 + PTPRD-PTPRD chr9 10102328 10102329 - chr9 10340962 10340963 + PTPRD-PTPRD new exon chr9 10341017 10341018 - chr9 10612397 10612398 + PTPRD-PTPRD chr9 17309057 17309058 + chr9 17416189 17416190 - CNTLN large circular chr9 20715321 20715322 + chr9 20823115 20823116 - FOCAD large circular chr9 37126311 37126312 + chr9 37327834 37327835 - ZCCHC7 large circular chr9 77794462 77794463 + chr9 77922345 77922346 - GNAQ large cicular chr10 112668998 112669010 - chr10 112888734 112888735 + VTI1A new exon chr10 115120184 115120185 + chr10 115241725 115241726 - ATRNL1 large circular chr10 115120184 115120185 + chr10 115426302 115426303 - ATRNL1 large circular chr10 115120184 115120185 + chr10 115549536 115549537 - ATRNL1 large circular chr10 115120184 115120185 + chr10 115847991 115847992 - ATRNL1 large circular chr10 115215696 115215697 + chr10 115315736 115315737 - ATRNL1 large circular chr10 115215696 115215697 + chr10 115334419 115334420 - ATRNL1 large circular chr10 115549536 115549537 - chr10 115847876 115847877 + ATRNL1-ATRNL1 chr10 121790168 121790169 + chr10 121924329 121924330 - ATE1 large circular chr10 18150975 18150976 - chr10 18401923 18401924 + CACNB2-CACNB2 chr10 34470263 34470264 - chr10 34696317 34696318 + PARD3-PARD3 chr10 45862985 45862986 + chr10 45964871 45964872 - LOC728407 large circular chr10 472549 472550 - chr10 689493 689494 + DIP2C-DIP2C chr10 486530 486531 - chr10 689493 689494 + DIP2C-DIP2C chr10 60279550 60279650 - chr10 60508470 60733335 + prtcl/013,005,003,004,038,149 chr10 7243557 7243558 + chr10 7381949 7381950 - normal SFMBT2 large circular chr10 7276891 7276892 + chr10 7381949 7381950 - normal SFMBT2 large circular chr10 75512777 75512778 - chr10 76036007 76036008 + prtcl/003,007,022,025,036,037,039,125,126,140,143,144,145,147,151 chr10 77403900 77404025 - chr10 77637260 77637345 + prtcl/007,013,015,024,040,144,151 chr11 102832906 102832907 - chr11 103048413 103048414 + prtcl/006,021,038,040,140 chr11 112961664 112961665 - chr11 113204285 113204286 + NCAM1-NCAM1 chr11 1480885 1480886 - chr11_KI270830v1_alt 16635 16636 + prtcl/001,013,021,022,032,036,037,141,143,144,147,148 chr11 17878207 17878208 + chr11 18008076 18008077 - SERGEF large circular chr11 17878207 17878208 + chr11 18010139 18010140 - SERGEF large circular chr11 23652394 23652395 - chr11 24043634 24043635 + prtcl/001,015,038 chr11 62841770 62841790 - chr11 65500025 65505145 - prtcl/125,040,140,035,007,008,152,024 chr11 84534731 84534732 - chr11 85111660 85111661 + DLG2-DLG2 chr11 84534731 84534732 - chr11 85154555 85154556 + DLG2-DLG2 chr12 116096668 116096669 + chr12 116237705 116237706 - MED13L large circular chr12 1289851 1289852 + chr12 1408247 1408248 - ERC large circular chr12 19132392 19132393 + chr12 19257537 19257538 - PLEKHA5 large circular chr12 20370244 20370245 - chr12 20613442 20613443 + PDE4A-PDE4A chr12 41194188 41194189 - chr12 41506455 41506456 + PDZRN4-PDZRN4 chr12 85424204 85424205 - chr12 85702880 85702881 + prtcl/003,015,038 chr13 100262728 100262729 + chr13 100368574 100368575 - PCCA large circular chr13 100301459 100301460 + chr13 100449305 100449306 - PCCA large circular chr13 66631411 66631412 - chr13 67225404 67225405 + PCDH9-PCDH9 chr13 69838975 69838976 + chr13 69975802 69975803 - KLHL1 large circular chr13 71557023 71557024 + chr13 71681910 71681911 - DACH1 large circular chr13 75621762 75621763 + chr13 75727098 75727099 - LMO7 large circular chr13 93227545 93227625 - chr13 93545255 93545285 + prtcl/024,016,125,148 chr13 93545421 93545422 - chr13 93830153 93830154 + GPC6-GPC6 chr14 37817577 37817578 + chr14 37968588 37968589 - new large circular chr14 37867360 37867361 + chr14 37968588 37968589 - new large circular chr14 37868445 37868446 + chr14 37968588 37968589 - new large circular chr15 20239401 20239402 + chr15 21047860 21047861 + new large circular chr15 71256715 71256716 - chr15 71660529 71660530 + THSD4-THSD4 chr15 77252366 77252367 + chr15 77365225 77365226 - PEAK1 large circular chr16 47497398 47497399 + chr16 47610920 47610921 - PHKB large circular chr16 7304485 7304486 - chr16 7518146 7518147 + prtcl/008,035,125 chr16 85371278 85371279 - chr16 85633913 85633914 + new exon in GSE1 chr16 85371278 85371279 - chr16 85648551 85648552 + new exon in GSE1 chr17 61084564 61084565 - chr17 61368326 61368327 + BCAS3-BCAS3 chr18 13278104 13278105 + chr18 13438384 13438385 - LDLRAD4 large ciruclar chr18 13387762 13387763 - chr18 13621116 13621117 + LDLRAD4-LDLRAD4 chr18 26501250 26501251 - chr18 26703391 26703392 + KCTD1-PCAT18 readthrough chr18 44701174 44701175 + chr18 44869283 44869284 - SETBP1 large circular chr18 74630966 74630967 + chr18 74781502 74781503 - ZNF407 large circular chr19 617634 617635 + chr19 15902499 15902500 - prtcl/040,125,126 chr20 14684959 14684960 - chr20 15229930 15229931 + MACROD2-MACROD2 alignment artefact chr20 8371450 8371451 - chr20 8628294 8628295 + PLCB1-PLCB1 chr21 14857708 14857709 - chr21 15064744 15064745 + NRIP1 missing exon chr21 28228478 28228479 - chr21 28446289 28446290 + prtcl/140,145,152" chr22 33650668 33650669 - chr22 33919994 33919995 + LARGE-LARGE chrX 22743343 22743344 - chrX 23064037 23064038 + RP11-40F8.2-RP11-40F8.2 alignment artefact chrX 31968514 31968515 - chrX 32216915 32216916 + DMD1-DMD chrX 42318552 42318553 - chrX 42581218 42581219 + prtcl/020,015,038 chrX 65075912 65075913 - chrX 65366637 65366638 + prtcl/003,019,024,025,026,038,039,126,145,147,149,151,126 chr1 173240023 173240024 - chr1 173462323 173462324 + NR_037845-NR_037845 chr1 21002712 21002713 + chr1 21111383 21111384 - EIF4G3 large circular chr1 219193081 219193082 + chr1 219295151 219295152 - prtcl/125,015,038,019 chr1 224974090 224974091 + chr1 225097239 225097240 - DNAH14 large circular chr1 247640429 247640430 - chr1 247860616 247860617 + prtcl/038,022,019,149 chr1 46815264 46815265 - chr1 47029989 47029990 + CYP4B1-CYP4X1 readthrought prtcl/015,125 chr1 57970865 57970866 - chr1 58253806 58253807 + DAB1 readthrough prtcl/033,015,019,022,038 chr1 58262580 58262581 - chr1 58506059 58506060 + prtcl/005,006,016,125,148,152,140 chr1 61277519 61277520 + chr1 61406727 61406728 - NFIA large circular chr1 63774508 63774509 - chr1 64049690 64049691 + ROR1-ROR1 chr1 72466386 72466387 - chr1 72749165 72749166 + new gene prtcl/140,015,019,022,038 chr1 72519188 72519189 - chr1 72749165 72749166 + new gene prtcl/140,015,019,022,038 chr1 8495062 8495063 + chr1 8614686 8614687 - RERE large circular chr1 85358847 85358848 - chr1 85577983 85577984 + DDAH1-DDAH1 chr2 10685919 10685920 + chr2 10686880 10686910 + normal prtcl/149/015/038 chr2 168012633 168012634 + chr2 168129758 168129759 - STK39 large circular chr2 18644300 18644301 - chr2 18919212 18919213 + prtcl/007,148" chr2 18688328 18688329 - chr2 18919212 18919213 + prtcl/145,147" chr2 204686282 204686283 - chr2 204914450 204914451 + PARD3B-PARD3B new exon chr2 24564294 24564295 + chr2 24683128 24683129 - NCOA1 large circular new exon chr2 94211974 94211975 - chr2_KI270772v1_alt 44348 44349 - prtcl/008,031,125 chr6 8558643 8558644 - chr6 8784151 8784152 + RP11-315C16.1-RP11-315C16.1 basis chr6 51407584 51407585 + chr6 159750864 159750865 + basis chr6 16485971 16485972 + chr6 16753347 16753348 - ATXN1 large circular basis chr6 51407584 51407585 + chr6 159750864 159750865 + s6731,s7248,s10014,s11324,s11359,s11364,s11365,s11368,s11393,s11394,s11820,s13297,s13298r1,s13299r1,s13299r2,s13304,s13418,s13625,s18020,s18754,s4970,s4975,s8660,s8978,s9575,s9579,s9592,s9755,s9757,s9844 chrX 7929413 7929414 - chrX 8228334 8228335 + s6731,s11383,s11385,s11394,s11751,s11756,s13297,s13298r1,s13298r2,s13299r1,s13311,s13422,s13426,s13622,s13623,s6409,s6732,s6733,s7239,s7241,s7409,s8652,s8828,s8965,s8971,s9592 chrX 136668062 136668063 + chrX 136781148 136781149 - chrX 104658995 104658996 - chrX 105195474 105195475 + chr6 8558643 8558644 - chr6 8784190 8784191 + chr6 71585215 71585216 - chr17 41524998 41524999 - chr6 32641288 32643160 + chr6 32741525 32746417 - alignment artefact homologue HLA-DQA1/2 chr6 31224527 31224528 - chr6 31530620 31530621 + maps to highly simlar region chr6 29944136 29944139 - chr6 31355375 31355385 - HLA-A/B chr6 24683762 24683763 + chr22 32533808 32533809 - chr6 24683650 24683780 - chr22 32531900 32532015 + chr6 21668899 21668900 - chr6 21909469 21909470 + CASC15-CASC15 chr5 97431900 97431901 - chr5 97668550 97668551 + chr5 96379652 96379653 - chr5 96675538 96675539 + chr5 73960499 73960500 - chr21 26019655 26019656 - chr5 67214577 67214578 - chr5 67619790 67619791 + new gene chr5 67215104 67215105 - chr5 67619790 67619791 + new gene chr5 67216597 67216598 - chr5 67619790 67619791 + new gene chr5 67244662 67244663 - chr5 67619790 67619791 + new gene chr5 53886713 53886714 - chr5 54111387 54111388 + ARL15-ARL15 chr5 53886713 53886714 - chr5 54113201 54113202 + ARL15-ARL15 chr5 143333796 143333797 + chr10 28523584 28523587 + chr5 129107062 129107063 - chr5 129343668 129343669 + chr4 9601620 9601621 - chr12 32100478 32100479 - chr4 9601617 9601618 - chr6 88382558 88382559 - chr4 77557485 77557486 + chr17 14033725 14033726 - chr11 1599121 1599122 + chr11 71561140 71561141 + chr11 5709255 5709256 - chr11 5937400 5937401 + chr11 96092296 96092297 - chr11 96342907 96342908 + MAML2-MAML2 chr11 96093511 96093512 - chr11 96341382 96341383 + MAML2-MAML2 chr11 96093517 96093518 - chr11 96299457 96299458 + MAML2-MAML2 chr11 96093517 96093518 - chr11 96339636 96339637 + MAML2-MAML2 chr11 96093517 96093518 - chr11 96341382 96341383 + MAML2-MAML2 chr11 96093517 96093518 - chr11 96341539 96341540 + MAML2-MAML2 chr11 309080 330930 + chr11 320635 320660 + FITM2-FITM3 readthrough chr11 308180 308300 - chr11 320690 320735 - FITM2-FITM3 readthrough chr11 9083003 9083004 - chr11 83317876 83317877 - chr16 15027035 15027036 + chr16 70013773 70013774 + PDXC1-PDXC2P chr16 29226896 29226897 + chr16 88192912 88192913 + chr16 29110508 29110509 - chr16 87978487 87978488 + chr16 15027035 15027036 + chr16 70013773 70013774 + chr16 78164289 78164290 - chr16 78424869 78424870 + WWOX-WWOX chr16 78432752 78432753 - chr16 78996201 78996202 + WWOX-WWOX chr15 63071207 63071208 + chr15 81323670 81323671 - chr15 39071608 39071609 - chr15 39600844 39600845 + chr11 18269714 18269715 + chr11 35488325 35488326 - chr11 17788413 17788414 - chr11 17988596 17988597 + SERGEF-SERGEF chr11 131370463 131370897 - chr11 132146273 132146523 + NTM-NTM chr11 106177330 106177331 - chr11 106409142 106409143 + new gene chr11 106177330 106177331 - chr11 106532684 106532685 + new gene chr12 116022465 116022602 - chr12 116237468 116237609 + MED13L-MED13L chr13 75621762 75621763 + chr13 75761038 75761039 - chr13 50433550 50433551 - chr13 50712537 50712538 + DLEU1-DLEU7 chr13 50433550 50433551 - chr13 50757762 50757763 + DLEU1-DLEU7 chr13 33130289 33130290 - chr13 33350289 33350290 + STARD13-STARD13 chr13 33142373 33142374 - chr13 33350289 33350290 + STARD13-STARD13 chr13 33167622 33167623 - chr13 33439690 33439691 + STARD13-STARD13 chr3 77098340 77098341 - chr3 77340431 77340432 + chr3 61748982 61748983 - chr3 61989624 61989625 + PTPRG-PTPRG chr3 61562372 61562373 - chr3 61989624 61989625 + PTPRG-PTPRG chr3 23217312 23217313 - chr3 23449857 23449858 + UBE2E2-UBE2E2 chr3 195687747 195689439 - chr3 195959108 195960499 - chr3 195689773 195691177 - chr3 195956590 195958606 - chr3 195655296 195691112 + chr3 195957571 197630765 + chr7 9760063 9760064 - chr7 10085275 10085276 + new gene chr7 9822041 9822042 - chr7 10085275 10085276 + new gene chr7 9866917 9866918 - chr7 10085275 10085276 + new gene chr7 93591771 93591772 - chr7 93807203 93807204 + new gene chr7 89423248 89423249 - chr7 89694320 89694321 + chr7 7673322 7673454 - chr7 7877280 7877400 + chr7 42023467 42023468 + chr7 42223295 42223296 - GLI3 large cicular chr7 42040037 42040038 + chr7 42223295 42223296 - GLI3 large cicular chr7 42076751 42076752 + chr7 42223295 42223296 - GLI3 large cicular chr7 40509545 40509546 - chr7 40749433 40749434 + chr7 29146960 29146961 - chr7 29354624 29354625 + chr7 156724111 156724112 + chr7 156826744 156826745 - chr7 111989160 111989190 - chr7 112206101 112206102 + DOCK4-DOCK4 chr7 112004131 112004132 - chr7 112205372 112205373 + DOCK4-DOCK4 chr7 112004131 112004132 - chr7 112206101 112206102 + DOCK4-DOCK4 chr7 109841570 109841571 - chr7 110120090 110120091 + new gene chr7 109841570 109841571 - chr7 110180977 110180978 + new gene chr7 109841570 109841571 - chr7 110290306 110290307 + new gene chr7 109841570 109841571 - chr7 110394550 110394551 + new gene chr7 109841570 109841571 - chr7 110432810 110432811 + new gene chr8 95268890 95268891 - chr8 95610663 95610664 + readthrough chr8 114648437 114648438 - chr8 114902464 114902465 + new gene chr8 114648437 114648438 - chr8 114986615 114986616 + new gene chr8 114648437 114648438 - chr8 114996319 114996320 + new gene chr8 101543240 101543241 + chr8 101649499 101649500 - GRHL2 large circular chr9 63823240 63823796 - chr9_KI270718v1_random 37432 37967 - chr9 63823240 63823796 + chr9_KI270718v1_random 37432 37967 + chr9 62798904 62798929 + chr9 63816726 63816848 + chr9 137716625 137716626 + chr9 137818138 137818139 - chr9 13553324 13553325 - chr9 13835797 13835798 + chr10 8669801 8669802 - chr10 9065362 9065363 + chr10 77404023 77404024 - chr10 77710505 77710506 + KCNMA1 new exon chr10 77493929 77493930 - chr10 77710505 77710506 + kCNMA1 new exon chr10 74151250 74151310 - chr10 74394145 74394175 + ADK-ADK (1) chr10 74176850 74176890 - chr10 74394135 74394240 + ADK-ADK (2) chr10 51153180 51153335 - chr10 51804580 51804680 + PRKG1-PRKG1 chr10 24219734 24219910 - chr10 24432994 24433024 + KIAA1217-KIAA1217 chr10 24219695 24219910 - chr10 24473226 24473227 + chr10 129467285 129467297 - chr10 129707894 129707895 + MGMT-MGMT chr10 129536255 129536378 - chr10 129759201 129759258 + MGMT-MGMT chr10 129536255 129536378 - chr10 129766785 129766788 + MGMT-MGMT chr10 8669801 8669802 - chr10 9065362 9065363 + chr10 77404023 77404024 - chr10 77710505 77710506 + chr10 74151265 74151306 - chr10 74394141 74394232 + ADK-ADK chr10 74176855 74176887 - chr10 74394141 74394232 + ADK-ADK chr10 51153191 51153331 - chr10 51804584 51804671 + PRKG1-PRKG1 chr1 71934907 71935336 - chr1 72282317 72282431 + NERG1-NERG1 chr1 75396621 75396622 - chr1 75615852 75615853 + chr1 75339630 75339631 - chr1 75615852 75615853 + chr1 197595207 197595208 + chr1 197715074 197715075 - chr1 197583151 197583152 + chr1 197772932 197772933 - chr1 197583151 197583152 + chr1 197715074 197715075 - chr1 164563311 164563312 - chr1 164792493 164792494 + chr1 162070282 162070283 - chr1 162287343 162287344 + chr2 78025424 78025425 - chr2 78485793 78485794 + chr2 61473618 61473619 - chr2 61476320 61476321 - chr2 41166555 41166556 - chr2 41418927 41418928 + chr2 26057640 26057641 - chr2 151431799 151431800 - chr2 19644860 19644861 - chr2 19901705 19901706 + chr2 19661586 19661587 - chr2 19901705 19901706 + chr2 155809927 155809928 + chr2 155914227 155914228 - chr2 133213779 133213780 - chr2 133517457 133517458 + chr2 10684612 10684613 - chr2 10686964 10686965 - NOL10-NOL10 chr3 192360538 192360539 - chr3 192644265 192644266 + FGF12-FGF12 chr3 17508601 17508606 - chr3 17742480 17742481 + TBC1D5-TBC1D5 chr3 17508255 17508436 - chr3 17742491 17742534 + TBC1D5-TBC1D5 chr3 17508473 17508474 + chr3 17623913 17623914 - TBC1D5-TBC1D5 chr3 17508486 17508541 - chr3 17742485 17742527 + TBC1D5-TBC1D5 chr3 172112451 172112509 + chr3 172226891 172226948 - chr3 111232985 111239233 - chr3 111496887 111496962 + chr4 91279163 91279164 - chr4 91598571 91598572 + chr4 86194407 86194408 - chr4 86453029 86453030 + chr4 52920490 52920871 - chr4 53145332 53145381 + chr4 40233406 40233407 + chr4 40235440 40235441 + chr4 157677333 157677334 - chr4 157929611 157929612 + chr17 9250501 9250646 - chr17 9491828 9491846 + chr17 9250501 9250646 - chr17 9505047 9505103 + chr17 9250501 9250646 - chr17 9545169 9545263 + chr17 72736719 72736720 - chr17 72947751 72947752 + chr17 72736719 72736720 - chr17 72947730 72947731 + chr17 57262192 57262193 - chr17 57529675 57529676 + MSI2-MSI2 chr17 46231901 46231902 + chr17 46277010 46277011 + chr17 46152903 46152904 + chr17 46247425 46247426 + chr17 46152903 46152904 + chr17 46248084 46248085 + chr17 45598501 45598502 - chr17 46152903 46152904 + chr14 78243802 78243803 - chr14 78645119 78645120 + NRXN3-NRXN3 chr14 66703613 66703614 - chr14 66705277 66705278 - chr14 66703616 66703617 + chr14 66704988 66704989 + chr14 44597013 44597014 - chr14 44797929 44797930 + chr15 82388649 82388659 + chr15 84373749 84373763 - chr15 71141448 71141449 + chr15 71256715 71256716 - chr15 39071608 39071609 - chr15 39587320 39587321 + chr15 9250548 9250646 - chr15 9491828 9491846 + chr15 9250550 9250603 - chr15 9505047 9505103 + chr15 9250501 9250603 - chr15 9545169 9545263 + chr17 72736719 72736720 - chr17 72947730 72947731 + chr17 72736719 72736720 - chr17 72947751 72947752 + chr17 68306943 68306944 + chr17 68420507 68420508 - ARSG large circular chr17 46231901 46231902 + chr17 46277010 46277011 + chr17 46152903 46152904 + chr17 46247425 46247426 + chr17 46152903 46152904 + chr17 46248084 46248085 + chr17 45598501 45598502 - chr17 46152903 46152904 + chr17 45597838 45597839 - chr17 46152903 46152904 + chr17 45578419 45578420 + chr17 46289344 46289345 - chr18 7567891 7567892 - chr18 7888105 7888106 + chr18 44701174 44701175 + chr18 44803099 44803100 - chr18 39535615 39535616 - chr18 39800068 39800069 + chr18 34493514 34493515 - chr18 34755975 34755976 + chr19 684258 684259 - chr19 57305536 57305537 - chr19 57851543 57851984 - chr19 57914908 57914919 - chr19 57852149 57852405 - chr19 57914830 57914898 - chr19 57852149 57852405 + chr19 57914830 57914898 + chr19 23379815 23379848 - chr19 23799177 23799607 - chr19 23379735 23379766 + chr19 23799721 23799887 + chr20 42885593 42885933 - chr20 43189642 43189815 + PTPRT-PTPRT chr20 42885593 42885933 - chr20 43123761 43123762 + PTPRT-PTPRT chr20 42472297 42472570 - chr20 42677863 42677941 + PTPRT-PTPRT chr20 14695864 14695865 - chr20 15229939 15229940 + chr21 8213880 8213886 + chr21 8441312 8441314 - chr21 35580929 35580930 - chr21 35814950 35814951 + chr21 35580929 35580930 - chr21 35864284 35864285 + chr21 28577380 28577381 - chr21 28821904 28821905 + chr21 17917400 17917401 - chr21 18199877 18199878 + CHODL-CHODL chr21 17917400 17917401 - chr21 18224515 18224516 + CHODL-CHODL chr21 17917787 17917788 - chr21 18256508 18256509 + CHODL-CHODL chr22 47687206 47687207 - chr22 48013740 48013741 + chrX 94303122 94303123 - chrX 94529409 94529410 + new gene chrX 94326894 94326895 - chrX 94529409 94529410 + new gene chrX 94193575 94193576 - chrX 94529409 94529410 + new gene chrX 68081700 68081701 + chrX 68194498 68194499 - OPHN1 large circular (1) chrX 68081700 68081701 + chrX 68299096 68299097 - OPHN1 large circular (2) chrX 68096869 68096870 + chrX 68201710 68201711 - OPHN1 large circular (3) chrX 68096869 68096870 + chrX 68299096 68299097 - OPHN1 large circular (4) chrX 132218837 132218838 - chrX 132429812 132429813 + chrX 129200769 129200770 - chrX 129448332 129448333 + chrX 129180053 129180054 - chrX 129448332 129448333 + chr1 78643143 78643144 + chr1 78838564 78838565 - new circular chr1 789460 789510 + chr1 224014210 224014520 - chr1 78643143 78643144 + chr1 78838564 78838565 - chr1 61088265 61088690 - chr1 61332524 61332946 + chr1 61088265 61088690 - chr1 61352449 61352466 + chr1 58277672 58277673 - chr1 58506059 58506060 + chr1 58253806 58253807 + chr1 58539310 58539311 - chr1 49245801 49245860 - chr1 49851407 49851478 + chr1 239678288 239678289 - chr1 239907432 239907433 + CHRM3-CHRM3 chr1 216677491 216677492 - chr1 216905564 216905565 + chr1 216677491 216677492 - chr1 217078135 217078136 + chr1 215086367 215086368 + chr1 215195092 215195093 - chr1 197595207 197595208 + chr1 197715074 197715075 - chr1 170807604 170807605 - chr1 171168103 171168104 + chr1 164563311 164563312 - chr1 164792493 164792494 + chr1 164560013 164560014 - chr1 164792493 164792494 + chr1 162070282 162070283 - chr1 162287343 162287344 + chr1 145574819 145574843 + chr1 146074394 146074412 - chr1 13893756 13893757 - chr1 14180434 14180435 + chr5 34182832 34182870 - chr5 69916099 69916219 - chr5 23977922 23977923 - chr5 24200195 24200196 + chr5 15192449 15192450 - chr5 15425574 15425575 + chr5 130462386 130462387 - chr5 130677594 130677595 + chr5 107427238 107427510 - chr5 107670287 107670601 + chr5 107084708 107084709 - chr5 107285893 107285894 + chr6 81845909 81845910 - chr6 82057938 82057939 + chr6 74636631 74636632 - chr6 74841949 74841950 + new gene chr6 74636631 74636632 - chr6 74944955 74944956 + new gene chr6 74636631 74636632 - chr6 75075943 75075944 + new gene chr6 74842040 74842041 - chr6 75075943 75075944 + new gene chr6 30261479 30261637 - chr6 31269043 31270086 - HLA-C chr6 29945450 29945451 + chr6 31382240 31382241 + chr6 29944138 29944139 - chr6 31355575 31355576 - chr6 15246180 15246585 - chr6 15452005 15452044 + chr7 118860012 118860013 - chr7 119165377 119165378 + chr8 47279269 47279270 + chr8 47440542 47440543 - SPIDR large circular chr8 47279269 47279270 + chr8 47599196 47599197 - SPIDR large circular chr8 47279861 47279862 + chr8 47396626 47396627 - SPIDR large circular chr8 47279861 47279862 + chr8 47440542 47440543 - SPIDR large circular chr8 47279861 47279862 + chr8 47491994 47491995 - SPIDR large circular chr8 18121057 18121058 - chr8 18343776 18343777 + NAT1 new splice variant chr8 18121057 18121058 - chr8 18380317 18380318 + NAT1 new splice variant chr8 18174093 18174094 - chr8 18380317 18380318 + NAT1 new splice variant chr8 117830349 117830350 - chr8 118110084 118110085 + EXT1-EXT1 chr8 117835461 117835555 - chr8 118110084 118110153 + EXT1-EXT1 chr8 117835461 117835555 - chr8 118110128 118110135 + EXT1-EXT1 chr8 117837119 117837202 - chr8 118060730 118060731 + EXT1-EXT1 chr8 117837119 117837202 - chr8 118110084 118110085 + EXT1-EXT1 chr8 117837119 117837202 - chr8 118110103 118110104 + EXT1-EXT1 chr8 115418452 115418453 - chr8 115619131 115619132 + TRPS1-TRPS1 chr8 115418452 115418453 - chr8 115668544 115668545 + TRPS1-TRPS1 chr9 37126311 37126312 + chr9 37304313 37304315 - ZCCHC7 large circular chr9 14146688 14146689 + chr9 14307520 14307521 - NFIB large circular chr9 14179726 14179727 + chr9 14307520 14307521 - NFIB large circular chr9 13553324 13553325 - chr9 13836312 13836313 + chr4 9601619 9601620 + chr14 55024545 55024546 + adenoma chr4 9601620 9601621 - chr6 88382555 88382556 - adenoma chr4 10871074 10871075 - chr4 11120762 11120764 + adenoma specfic readthrough? chr4 10871074 10871075 - chr4 11161762 11161763 + adenoma specfic readthrough? chr8 100920440 100920441 + chrX 64612387 64612388 - chr6 147509387 147509388 - chr6 148390133 148390134 + SASH1-SASH1 chr6 106971247 106971248 - chr15 56072681 56072682 + chr1 206929270 206929271 - chr19 41730132 41730133 - chr1 206696115 206696116 + chr5 150446958 150446959 - chr11 43855896 43855897 + chr11 84506381 84506382 - chr16 89563066 89563067 - chr19 56217175 56217176 - chr2 231713104 231713110 - chr17 76651452 76651455 - chr2 231713109 231713110 - chr14 92027083 92027084 + chr16 89561280 89561281 + chr17 17383854 17383855 + chr16 35174381 35174382 - chr22 19175890 19175891 - chr12 110294836 110294838 - chr16 89563066 89563067 - chr12 16400460 16400461 + chr14 21360933 21360934 - chr10 78037262 78037263 - chr11 33237307 33237308 + chr9 131414409 131414410 + chr12 113871823 113871824 + chr7 126904570 126904684 - chr7 127106494 127106508 + GRM8-GRM8 chr6 31356202 31356861 - chr6_GL000254v2_alt 2611923 2698866 + HLA-B-HLA-B chr5 61390792 61390793 - chr22 39313201 39313202 + chr5 59382411 59382412 - chr5 59586328 59586329 + PDE4D new exon chr5 176560933 176560934 - chr11_KI270927v1_alt 150312 150313 - chr5 147922876 147922877 + chr11 62566880 62566914 + chr4 9601620 9601621 - chr7 125221169 125221170 + chr4 154812716 154812717 - chr12 106348974 106348975 - chr4 117574873 117574874 - chr7 33014505 33014506 + chr4 108622605 108622606 - chr13 24988762 24988763 - chr3 40462025 40462047 + chr12 62965801 62965802 - chr3 142827454 142827455 - chr8 144791298 144791299 + chr1 13843040 13843108 - chr1 14180433 14180435 + chr1 14180592 14180593 - chr1 14496667 14496668 + KAZN splice variant chr1 14180592 14180593 - chr1 14598982 14598983 + KAZN splice variant chr2 212124903 212124904 - chr2 212538448 212538449 + ERBB4-ERBB4 chr2 212124903 212124904 - chr2 212537520 212537521 + ERBB4-ERBB4 chr2 212124903 212124904 - chr2 212445329 212445330 + ERBB4-ERBB4 chr2 211947429 211947430 + chr2 212124903 212124904 - ERBB4 large circular chr2 212395910 212396030 + chr3 63905474 63905475 - chr14 105587550 106538250 - chr14 105707555 106874785 + IGH chains chr14 105587550 106538250 + chr14 105707555 106874785 - IGH chains chr14 105600000 106800000 - chr14_KI270726v1_random 0 50000 - chr14 105600000 106800000 + chr14_KI270726v1_random 0 50000 + chr15 21142484 21143415 - chr22 22285529 22286389 + IGL duplicate chr15 21142475 21143430 + chr22 22285515 22286400 - IGL duplicate chr22 22100000 23000000 + chr22_KI270875v1_alt 0 300000 - chr22 22100000 23000000 - chr22_KI270875v1_alt 0 300000 + chr2 131571350 131571725 - chr14 18948624 18948750 + multi-map artefact chr2 131571350 131571725 + chr14 18948624 18948750 - multi-map artefact chr2 131571325 131571500 - chr18 54225925 54225975 + multi-map artefact chr2 130026100 130931000 - chr2 131284800 131634000 - POTEI modifications? chr2 130026100 130931000 - chr2 131284800 131634000 + POTEI modifications? chr2 130026100 130931000 + chr2 131284800 131634000 - POTEI modifications? chr2 130026100 130931000 + chr2 131284800 131634000 + POTEI modifications? chr10 76029004 76029030 - chr14 74199770 74200250 - chr10 76058783 76058784 - chr10 76324400 76324401 + LRMDA-LRMDA chr3 174737652 174737747 - chr3 175096789 175097064 + NAALADL2-NAALADL2 alternative transcript chr3 175096789 175096790 + chr3 175234204 175234205 - NAALADL2 larce circular chr3 175262599 175262600 + chr9 70394298 70394299 + chr3 174737656 174737685 - chr3 175096893 175097064 + chr3 175233958 175234207 - chr3 175447225 175447244 + chr11 70896500 70896501 + chr11 71119032 71119033 - SHANK2-SHANK2 large circular chr11 70502931 70502932 - chr11 71224696 71224697 + SHANK2-SHANK2 chr2 202201031 202201342 + chr12 51242498 51242859 + chr6 151880675 151880772 - chr6 152094384 152094413 + ESR1-ESR1 chr6 151957070 151957071 + chrX 47383194 47383195 + chr6 132771830 132771850 + chr6 151851800 151851920 + chr6 151807842 151807843 + chr6 151944395 151944509 - ESR1 large circular chr6 151807842 151807843 + chr6 152011794 152011795 - ESR1 large circular chr1 174256603 174256604 + chr6 152035755 152036005 - chr6 151842620 151842788 - chr6 152060990 152094385 + ESR1-ESR1 chr6 151842596 151842597 + chr6 151944508 151944509 - ESR1 large circular chr11 62665430 62665434 + chr19 893592 893596 - chr7 126477644 126477645 - chr18 79969403 79969404 + chr19 11132215 11132735 + chr1 83242618 83242731 - chr19 11132215 11132735 - chr1 83242618 83242731 + chr19 11132215 11132735 - chr12 128745500 128745515 + chr19 11132215 11132735 - chr13 19813095 19813115 - chr19 11132215 11132735 - chr15 100850380 100850395 - chr19 11132215 11132735 - chr7 112857310 112857320 - chr19 11132215 11132735 - chr9 89966710 89966720 + chr1 181718603 181718604 + chr7 103099601 103099602 + chr3 94505960 94506210 + chr7 103099150 103099500 + chr3 49403987 49404094 - chr7 136107450 136107454 + chr3 49404094 49404095 + chr12 85726526 85726527 + chr14 21643470 22272570 - chr14 22462910 22551660 + TRA homologue chr2 218467950 218468040 - chr6 52501100 52501990 + chr2 218467950 218468040 + chr6 52501100 52501990 - chr8 140023904 140024075 - chr8 140252776 140252905 + TRAPPC9-TRAPPC9 chr8 139988674 139988836 - chr8 140221458 140221491 + TRAPPC9-TRAPPC9 chr8 139988674 139988836 - chr8 140252776 140252905 + TRAPPC9-TRAPPC9 chr5 21278006 21278007 - chr8 115516268 115516269 - chr2 76445370 76445405 - chr11 65499365 65499700 - chr1 28508570 28508765 + chr11 65500895 65505630 - chr1 28508570 28508765 + chr11 65500895 65505630 + chr10 37305780 37428290 - chr11 65499735 65501190 + chr11 62841645 62841810 - chr11 65499929 65506024 - chr11 62841645 62841810 + chr11 65499929 65506024 + chr2 76445353 76445421 - chr11 65499360 65506029 - chr7 94427791 94428328 + chr11 65503400 65503524 - chr9 35657810 35658023 - chr11 65500126 65503315 - chr9 35657810 35658023 + chr11 65500126 65503315 + chr11 65499391 65505983 - chr12 112267093 112267187 + chr11 65489914 65511918 - chr22_KI270733v1_random 112743 184987 + chr6 24683749 24683921 + chr22 32532141 32533816 - chr2 211701966 211701967 + chr2 211947616 211947617 - ERBB4 large circular chr2 211788024 211788025 + chr2 211947616 211947617 - ERBB4 large circular chr2 211629820 211630135 + chr9 72153014 72153071 + chr10 35955324 35959930 + chr10 37395190 37401967 - chr10 35955324 35959930 - chr10 37395190 37401967 + chr10 37396696 37396860 - chr20 22296859 22296935 + chr2 135498429 135498440 - chr10 37412669 37413205 - chr2 235494685 235494859 - chr2 236049048 236049069 + AGAP1-AGAP1 chr2 235494685 235494859 - chr2 235709168 235709232 + AGAP1-AGAP1 chr2 235499588 235499609 - chr2 235709168 235709232 + AGAP1-AGAP1 chr2 235505624 235505645 - chr2 235709168 235709232 + AGAP1-AGAP1 chr2 235494685 235494859 - chr2 235717545 235717618 + AGAP1-AGAP1 chr2 235494685 235494859 - chr2 235740947 235740973 + AGAP1-AGAP1 chr2 235494685 235494859 - chr2 235744685 235744734 + AGAP1-AGAP1 chr4 122076228 122076316 - chr22 31205902 31206160 - chr8 115498189 115500098 - chr11 58179047 58179099 - chr8 115497954 115498298 - chr13 42026451 42026483 - chr8 115524538 115524730 + chr22 42712708 42712752 + chr8 115409249 1154092760 + chr15 60870437 60870458 - chr14 103341880 103341901 + chr20 34200704 34200725 - chr1 228256302 228256306 - chr22 22900970 22900980 + chr1 228256302 228256306 - chr22 22906340 22906345 + chr7 44328174 44328175 + chr22 22906340 22906345 + chr7 44328174 44328175 + chr22 22900970 22900980 + chr8 124144855 124144870 + chr22 22900970 22900980 + chr3 195690630 195690640 + chr5 265415 265426 - chr3 195692603 195693038 - chr5 267850 267901 + chr3 195693137 195693462 + chr5 267915 267993 - chr17 46291135 46291195 + chr17 64923595 64923615 + chr17 46135404 46135415 + chr17 64922331 64922343 + chr17 45613606 45613749 - chr17 46277000 46277049 + possibly new transcript chr19 17582186 17582324 + chr20 35505413 35505437 + chr19 17581773 17582043 - chr20 35505488 35505512 - chr3 167786343 167786364 - chr19 17581690 17582056 - chr10 27486902 27486955 - chr12 11104506 11104548 - chr12 11042794 11042837 - chr12 15212296 15212390 + chr3 63018769 63018822 - chr12 11038761 11038877 + chr8 122656818 122656841 - chr12 11099626 11099709 + chr3 171562605 171562606 + chr15 64951304 64951305 - chr3 171562624 171562625 - chr15 64951299 64951300 + chr2 99672589 99672590 - chr2 100006630 100006768 + AFF3-AFF3 chr2 99727076 99727112 - chr2 100006630 100006768 + AFF3-AFF3 chr2 99744103 99744132 - chr2 100006631 100006688 + AFF3-AFF3 chr2 99752241 99752302 - chr2 100006631 100006688 + AFF3-AFF3 chr2 99727076 99727077 + chr2 100008932 100008933 - AFF3 large circular chr2 99837476 99837477 + chr2 100008932 100008933 - AFF3 large cicular chr2 99649625 99649626 + chr2 100008932 100008933 - AFF3 large cicular chr2 99649625 99649626 + chr2 100011571 100011572 - AFF3 large cicular chr19 54353981 54354292 + chr22 34958203 34958231 - chr19 54353982 54354111 + chr19 58458965 58458977 - chr7 141780031 141780042 + chr19 54354020 54354139 + PLXDC2-PLXDC2 chr10 19817053 19817192 - chr10 20046868 20046879 + PLXDC2-PLXDC2 chr10 19817053 19817192 - chr10 20068167 20068199 + PLXDC2-PLXDC2 chr10 19817191 19817192 - chr10 20143294 20143295 + PLXDC2-PLXDC2 chr10 20001774 20001775 + chr10 20245505 20245506 - PLXDC2 large circular chr10 20143294 20143295 + chr10 20245505 20245506 - PLXDC2 large circular chr7 110663321 110663723 - chr7 110886592 110886620 + IMMP2L-IMMP2L chr7 110663450 110963566 - chr7 111329393 111329394 + IMMP2L new exon chr7 110663450 110963566 - chr7 111392801 111392802 + IMMP2L new exon chr7 110663450 110963566 - chr7 111413944 111413945 + IMMP2L new exon chr7 110886695 110886696 - chr7 111487237 111487238 + IMMP2L-IMMP2L chr7 110663702 110663721 - chr7 111487237 111487278 + IMMP2L-IMMP2L chr7 110886603 110886695 - chr7 111487237 111487278 + IMMP2L-IMMP2L chr7 110886603 110886695 - chr7 111487237 111487250 + IMMP2L-IMMP2L chr7 110663450 110963566 - chr7 111487237 111487250 + IMMP2L-IMMP2L chr7 110964851 110964852 - chr7 111487237 111487250 + IMMP2L-IMMP2L chr7 111080215 111080216 - chr7 111487237 111487250 + IMMP2L-IMMP2L chr7 111235468 111235469 - chr7 111487237 111487250 + IMMP2L-IMMP2L chr7 111275153 111275154 - chr7 111487237 111487250 + IMMP2L-IMMP2L chr7 110663450 110963566 - chr7 111521312 111521348 + IMMP2L-IMMP2L chr7 110886603 110886695 - chr7 111521312 111521348 + IMMP2L-IMMP2L chr7 110663450 110963566 - chr7 111561850 111561861 + IMMP2L-IMMP2L chr7 111275153 111275154 - chr7 111561850 111561861 + IMMP2L-IMMP2L chr7 111417258 111417259 + chr7 111561923 111561924 - IMMP2L large circular chr3 59536997 59536998 - chr3 59809731 59809732 + FHIT-FHIT chr3 59752302 59752322 - chr3 60011370 60011371 + FHIT-FHIT chr3 59752302 59752322 - chr3 60014006 60014007 + FHIT-FHIT chr3 60014031 60014265 - chr3 60277452 60277470 + FHIT-FHIT chr3 59922373 59922403 - chr3 60277452 60277470 + FHIT-FHIT chr3 60014031 60014265 - chr3 60536756 60536980 + FHIT-FHIT chr3 60014031 60014265 - chr3 60821918 60821938 + FHIT-FHIT chr3 60014031 60014265 - chr3 60277452 60277483 + FHIT-FHIT chr3 60014031 60014265 - chr3 61042043 61042077 + FHIT-FHIT chr3 60822011 60822012 - chr3 61042046 61042047 + FHIT-FHIT chr3 60822011 60822012 - chr3 61200616 61200617 + FHIT-FHIT chr3 60536792 60536980 - chr3 61042043 61042077 + FHIT-FHIT chr3 60536792 60536980 - chr3 60821918 60821938 + FHIT-FHIT chr3 60536792 60536980 - chr3 61200616 61200617 + FHIT-FHIT chr3 60536792 60536980 - chr3 61251300 61251381 + FHIT-FHIT chr3 61041770 61042115 - chr3 61251300 61251381 + FHIT-FHIT chr1 245764149 245764150 - chr1 246327200 246327276 + SMYD3-SMYD3 chr1 245863812 245863887 - chr1 246327200 246327276 + SMYD3-SMYD3 chr1 245915640 245915641 - chr1 246327200 246327276 + SMYD3-SMYD3 chr1 245928000 245928036 - chr1 246327200 246327276 + SMYD3-SMYD3 chr1 245929887 245929938 - chr1 246327200 246327276 + SMYD3-SMYD3 chr1 245929887 245929938 - chr1 246507051 246507125 + SMYD3-SMYD3 chr1 245929887 245929938 - chr1 246146855 246146890 + SMYD3-SMYD3 chr1 245928000 245928036 - chr1 246186740 246186790 + SMYD3-SMYD3 chr1 245858495 245858496 + chr1 246186922 246186963 - SMYD3 large circular chr10 12349750 12349911 - chr10 12553220 12553284 + CAMK1D-CAMK1D chr10 12553240 12553357 - chr10 12760940 12760989 + CAMK1D-CAMK1D chr1 211941555 211941702 + chr22 40132769 40132793 + chr7 128478364 128502809 + chr17 62422980 62449629 - METTL2A-METTL2B chr1 16620400 16628001 - chr1 16946500 16949601 - CROCCP2-CROCC chr1 16620400 16628001 + chr1 16946500 16949601 + CROCCP2-CROCC chr8 139988765 139988837 - chr8 140221458 140221512 + TRAPPC9-TRAPPC9 chr8 140024033 140024081 - chr8 140252775 140252925 + TRAPPC9-TRAPPC9 chr7 69899390 69899499 - chr7 70118131 70118152 + AUTS2-AUTS2 chr7 69899390 69899499 - chr7 70134535 70134764 + AUTS2-AUTS2 chr7 69899390 69899499 - chr7 70435751 70435752 + AUTS2-AUTS2 chr7 69899390 69899499 - chr7 70698568 70698595 + AUTS2-AUTS2 chr7 69899390 69899499 - chr7 70762868 70762897 + AUTS2-AUTS2 chr7 69599962 69599963 - chr7 69816399 69816400 + AUTS2-AUTS2 chr7 69599962 69599963 - chr7 69825779 69825780 + AUTS2-AUTS2 chr7 69599962 69599963 - chr7 69899289 69899290 + AUTS2-AUTS2 chr7 69599962 69599963 - chr7 70118131 70118132 + AUTS2-AUTS2 chr7 70134571 70134572 - chr7 70435751 70435752 + AUTS2-AUTS2 chr7 70134571 70134572 - chr7 70698568 70698569 + AUTS2-AUTS2 chr7 70435781 70435782 - chr7 70698568 70698569 + AUTS2-AUTS2 chr10 5639724 5639725 + chrX 31863019 31863020 + chrX 31134194 31134195 - chrX 31627672 31627673 + DMD->DMD chrX 31147518 31147519 - chrX 31929595 31929596 + DMD->DMD chrX 31209699 31209700 - chrX 31627672 31627673 + DMD->DMD chrX 31223121 31223122 - chrX 32155370 32155376 + DMD->DMD chrX 31323658 31323659 - chrX 32155370 32155376 + DMD->DMD chrX 31479103 31479104 - chrX 31729630 31729631 + DMD->DMD chrX 31679586 31679587 - chrX 32216915 32216916 + DMD->DMD chrX 31875201 31875375 - chrX 32216915 32216916 + DMD->DMD chrX 31932227 31932228 - chrX 32155370 32155376 + DMD->DMD chrX 32216915 32216916 + chrX 32348529 32348530 - DMD large circular chrX 32849740 32849821 - chrX 33211281 33211296 + DMD->DMD chrX 32849740 32849821 - chrX 33211281 33211296 + DMD->DMD chrX 32849740 32849821 - chrX 33211281 33211296 + DMD->DMD chrX 32849740 32849821 - chrX 33211281 33211296 + DMD->DMD chrX 32849740 32849821 - chrX 33211281 33211296 + DMD->DMD chrX 33078347 33078348 - chrX 33339258 33339259 + DMD->DMD chr19 54353691 54354312 + chr22 34958203 34958231 - chr17 34039134 34039315 - chr17 62565092 62565134 - TLK2-TLK2P1 chr8 118379530 118379702 - chr8 118580713 118580800 + SAMD12-SAMD12 chr8 118197722 118197736 - chr8 118439828 118439842 + SAMD12-SAMD12 chr8 118379690 118379704 - chr8 118621800 118621814 + SAMD12-SAMD12 chr8 118197650 118197734 - chr8 118439830 118439890 + SAMD12-SAMD12 chr8 118379430 118379702 - chr8 118621800 118621880 + SAMD12-SAMD12 chr8 118197530 118197735 - chr8 118580713 118580800 + SAMD12-SAMD12 chr2 141254546 141254644 - chr2 142130642 142130794 + LRP1B-LRP1B chr2 141254546 141254644 - chr2 141480395 141480491 + LRP1B-LRP1B chr2 141254546 141254644 - chr2 141810278 141810284 + LRP1B-LRP1B chr2 141429783 141429805 - chr2 141810278 141810284 + LRP1B-LRP1B chr2 141480400 141480536 - chr2 142130642 142130800 + LRP1B-LRP1B chr2 141480400 141480536 - chr2 141810278 141810284 + LRP1B-LRP1B chr2 141502854 141502855 - chr2 141810278 141810284 + LRP1B-LRP1B chr2 141546577 141546578 - chr2 141810278 141810284 + LRP1B-LRP1B chr2 141549987 141549988 - chr2 141810278 141810284 + LRP1B-LRP1B chr2 141810098 141810404 - chr2 142130642 142130800 + LRP1B-LRP1B chr2 141810098 141810404 - chr2 142130642 142130800 + LRP1B-LRP1B chr2 141810098 141810404 - chr2 142044326 142044327 + LRP1B-LRP1B chr2 141810098 141810404 - chr2 142125269 142125270 + LRP1B-LRP1B chr15 71411700 71411823 - chr15 71627093 71627094 + THSD4-THSD4 chr15 71411700 71411823 - chr15 71660527 71660661 + THSD4-THSD4 chr15 71242820 71243099 - chr15 71660527 71660661 + THSD4-THSD4 chr15 71411700 71411780 + chr15 71660734 71660735 - THSD4 large circular chr15 71141448 71141452 + chr15 71660734 71660735 - THSD4 large circular chr15 71411686 71411690 + chr15 71660734 71660735 - THSD4 large circular chr15 71411772 71411824 - chr15 71728547 71728561 + THSD4-THSD4 chr15 44701372 44701833 - chr15 44949880 44950850 + SETBP1-SETBP1 chr5 59215797 59215969 - chr5 59768251 59768391 + PDE4D-PDE4D chr5 59215797 59215969 - chr5 59586327 59586361 + PDE4D-PDE4D chr5 59215797 59215969 - chr5 59988486 59988621 + PDE4D-PDE4D chr5 59215797 59215969 - chr5 60185555 60185600 + PDE4D-PDE4D chr5 59215797 59215969 - chr5 59530326 59530327 + PDE4D-PDE4D chr5 59215797 59215969 - chr5 59430293 59430294 + PDE4D-PDE4D chr5 60185687 60185688 - chr5 60474480 60474481 + PDE4D-PDE4D chr5 59038858 59038859 + chr5 59215968 59215969 - PDE4D large circular chr5 59988487 59988488 + chr5 60185687 60185688 - PDE4D large circular chr5 59988650 59988718 - chr5 60487941 60487971 + PDE4D-PDE4D chr5 59685895 59685945 - chr5 60487941 60487971 + PDE4D-PDE4D chr5 60185560 60185690 - chr5 60487941 60487971 + PDE4D-PDE4D chr12 26786453 26786454 + chr13 52080889 52080890 - chr12 26805727 26805728 + chr12 124871515 124871516 - chr12 26481130 26481131 + chr12 26655852 26655853 - ITPR2 large circular chr12 26550246 26550247 + chr12 26655852 26655853 - ITPR2 large circular chr9 63400503 63401000 + chr22 22286044 22286472 + chr9 63400503 63401000 - chr22 22286044 22286472 - chr3 150492930 150492941 + chr18 63228520 63228535 - chr3 174495670 174495700 - chr7 157217450 157217490 - chr3 175627290 175627291 + chr3 175755418 175755419 - NAALADL2 large circular chr3 175324174 175324175 + chr3 175627386 175627387 - NAALADL2 large circular chr3 174737640 174737641 + chr3 174864090 174864091 - NAALADL2 large circular chr3 174550600 174550640 - chr3 175096788 175097080 + NAALADL2-NAALADL2 chr3 174859345 174859450 - chr3 175233928 175233975 + NAALADL2-NAALADL2 chr3 174859345 174859450 - chr3 175096788 175097080 + NAALADL2-NAALADL2 chr3 175097291 175097292 - chr3 175324174 175324175 + NAALADL2-NAALADL2 chr3 175256500 175256532 - chr3 175463400 175463430 + NAALADL2-NAALADL2 chr3 175471758 175471759 - chr3 175737305 175737306 + NAALADL2-NAALADL2 chr3 175471758 175471759 - chr3 175803000 175803005 + NAALADL2-NAALADL2 chr14 21188118 21188119 + chr22 23391631 23391632 + prtcl/005,019,022 chr14 49586868 49586889 - chr22 21723051 21723072 - prtcl/024,008,014,022 chr17 58805547 58805568 - chr22 15698174 15698195 + prtcl/026,007,042 chr1 116740569 116740590 - chr22 29490126 29490147 - prtcl/007,022,025,038 chr14 21188118 21188119 + chr22 23391631 23391632 + prtcl/026,005,019,022 chr10 115215696 115215697 + chr10 115426302 115426303 - ATRNL1 lage circular chr10 13858912 13858913 - chr10 14174011 14174012 + FRMD4A-FRMD4A new exon chr10 76576148 76576149 - chr15 82845230 82845231 + prtcl/038,126,007 chr10 78037187 78037228 - chrX 3113020 3113061 - prtcl/007,038,041,042,052 chr1 116740559 116740600 - chr22 29490116 29490157 - prtcl/007,022,025,038,126,141,143 chr1 156292378 156292439 - chr3 110878527 110878568 + prtcl/001,007,041 chr11 85935622 85936014 + chr22 19175789 19176165 + prtcl/016,004,126 chr12 10506275 10506296 + chrX 24057704 24057805 - prtcl/006,025,069 chr12 15212281 15212302 - chr17 49295229 49295630 + prtcl/140,068,024,125 chr1 23693864 23693925 - chr5 130990066 130990107 + prtcl/008,068,140,125,011 chr12 53038210 53038611 - chr16 47565354 47565415 - prtcl/125,024,140,068 chr12 77990102 77990123 + chr12 77994053 77994074 + could be population wide variant (small inversion) prtcl/140,015,031,036 chr13 21298315 21298336 - chr20 25390726 25390767 - prtcl/019,015,036 chr13 35110968 35110989 - chr15 20646443 20646484 - prtcl/015,007,032,141,143 chr13 64958696 64958737 - chr14 92711861 92711922 + prtcl/145,032,141,027 chr14 103341844 103341885 - chr20 34200654 34200715 + prtcl/145,027,013,015 chr14 18966891 18966912 - chr22 15689422 15689443 + prtcl/007,125,145,013 chr14 21188108 21188129 + chr22 23391621 23391642 + prtcl/005,019,022,145 chr14 49586858 49586899 - chr22 21723051 21723072 - prtcl/024,008,014,022 chr1 61088450 61088683 - chr1 61332509 61332570 + NFIA-NFIA chr1 63774100 63774510 - chr1 64009302 64009355 + ROR1-ROR1 chr16 89563023 89563104 - chr19 56217164 56217186 - prtcl/004,015,008,015,022,024 chr17 34516886 34516907 - chr17 79048118 79048159 + prtcl/014,016,039,040 chr17 58805547 58805568 - chr22 15698174 15698195 + prtcl/007,026,126 chr1 92837624 92837645 - chr22 42776577 42776598 - prtcl/031,007,026,126 chr20 26208429 26208490 - chr22_KI270733v1_random 168995 169056 - prtcl/016,025,038,147,148 chr20 26209450 26209650 - chr21 8433850 8434050 - prtcl/141,126 chr20 26209450 26209650 - chr22_KI270733v1_random 122850 123050 - prctl/025,014,026 chr20 26209450 26209650 + chr22_KI270733v1_random 168000 168350 + prtcl/038 chr20 8371379 8371430 - chr20 8628292 8628355 + PLCB1-PLCB1 chr2 131684647 131684688 - chr14 19335477 19335538 - prtcl/032,007,026 chr2 132274729 132274770 + chr3 132358003 132358064 + prctl/007,001,039 chr2 135509583 135509645 - chr5 151804919 151804960 - prtcl/026,126,145,147 chr21 8395943 8396494 + chr21 8440201 8440242 + prtcl/035,007,001,039 chr21 8438727 8439157 - chr22 32089518 32089558 + prtcl/125,151 chr2 185483081 185483102 - chr2 185729335 185729359 + prtcl/152,008,039,125 chr2 192054978 192055019 + chr3 102553751 102553792 - prtcl/151,007,050 chr2 192149204 192149225 - chr18 63702929 63702950 - prtcl/001,151,005 chr2 197805050 197805342 - chr2 198083755 198086084 + PLCL1-PCLC1 chr2 231427548 231427569 - chr15 92908982 92909183 - prtcl/037,014,005 chr2 47161760 47161801 + chr13 41170903 41170944 - prtcl/151,003,035,003 chr2 55234912 55234953 - chr6 113581726 113581767 + prtcl/004,025,003,001 chr2 61189497 61189518 + chr19 4243214 4243235 - prtcl/013,151,001,003 chr2 63706867 63706888 - chr19 52384767 52384868 - prtcl/011,003,024 chr2 73898346 73898368 + chr16 2183080 2183101 - prtcl/039,025,001 chr2 73898346 73898368 + chr21 29564441 29564462 - prtcl/149,025,001 chr2 74740960 74740971 + chr17 38919028 38919039 + prtcl/007,008,039,141,143 chr8 47085260 47085281 + chr14 19002353 19002374 - prtcl/125,151,141,143 chr8 47085260 47085281 + chr14 19399402 19399423 + prtcl/125,151,141,143 chr8 47085260 47085281 + chr22 15724969 15724990 - prtcl/125,151,141,143 chr6 113401866 113401887 - chr14 24965330 24965351 + prtcl/005,140,005,007 chr3 131968997 131969018 - chr3 131978033 131978054 - prtcl/001,015,032,148 chr5 117925121 117925133 - chr5 118265352 118265364 + LINC02147-LINC02147 chr5 10571014 10571035 + chr7 27150037 27150238 + prtcl/013,005,015,032,148 chr5 168883285 168883339 - chr5 169193476 169193525 + SLIT3-SLIT3 chr3 188883471 188883492 - chr20 56678190 56678211 + prtcl/033,001,004,032 chr6 38345002 38345095 - chr6 38577598 38577650 + BTBD9-BTBD9 chr7 82159837 82159858 - chr10 59143070 59143271 - prtcl/147,005,0148 chr5 55444119 55444320 + chr12 49199677 49199698 + prtcl/149,148,005,015,032 chr6 73518630 73518831 + chr15 52937807 52937828 - prtcl/025,001,007,015,031 chr9 131414392 131414433 + chr14 35038495 35038516 + prtcl/031,032,151,026 chr2 83877611 83877652 - chr7 64838341 64838953 + prtcl/031,003,038,013,015 chr6 113861005 113861026 + chr21 26235606 26235627 + prtcl/038,013,015 chr4 167000375 167000466 - chr4 167233982 167234150 + SPOCK3-SPOCK3 chr3 62779341 62779362 - chr12 62965791 62965812 - prtcl/024,038,013,015 chr5 53886450 53886716 - chr5 54113200 54113350 + ARL15-ARL15 chr8 117837125 117837204 - chr8 118110082 118110224 + EXT1-EXT1 chr8 101493484 101493505 + chr12 111055638 111055659 + prtcl/003,038,013,015,001 chr8 119862583 119862984 + chr14 49586679 49587080 - prtcl/007,015,016,019 chrX 124963817 124963818 - chrX 125185642 125185643 + TENM1 new exon chr7 111413356 111413845 - chr12 107809426 107809757 + looks like real fusion prtcl/149,022,035 chr6 144200376 144200397 - chr13 45337182 45337383 + prtcl/019,035,013,014 chr6 28740259 32621911 + chr6_GL000255v2_alt 0 3881652 - variation in human population chr6 28740259 32621911 - chr6_GL000255v2_alt 0 3881652 + variation in human population chr6 37819968 37820019 - chr6 38061590 38061750 + ZFAND3-ZFAND3 chr6 54775241 54775262 + chr12 25205680 25205781 + prtcl/149,013,014 chr4 45724000 45724021 + chr12 53040262 53040463 - prtcl/001,035,014 chr4 2031624 2031645 + chr18 58336577 58336618 + prtcl/148,014,026,027,031,032 chr3 116086345 116086559 - chr3 116444875 116445010 + LSAMP-LSAMP chr8 35235475 35235890 - chr8 35549289 35549500 + UNC5D-UNC5D chr5 116562731 116562752 - chr5 150446919 150446940 - prtcl/025,003,006,007 chr4 77421365 77421386 + chr15 36992057 36992078 + prtcl/007,015,020,026,027 chr3 61562150 61562375 - chr3 61989622 61989785 + PTPRG-PTPRG chr3 140175972 140176076 - chr3 140403626 140403804 + CLSTN2-CLSTN2 chr8 59970452 59970473 + chr19 56494324 56494365 - prtcl/145,020,001,005,006 chr3 184117340 184117441 + chr14 102082992 102083093 + prtcl/125,006,013,038,039 chr3 170524077 170524098 + chr4 185504464 185504485 + prtcl/014,005,013,038,039,040 chr8 89757560 89757581 - chr17 7715548 7715568 + prtcl/014,013,038,039 chr9 33289240 33289261 + chr19 13140383 13140404 - prtcl/035,005,006,013,038,039 chrX 132628100 132629095 - chrX 132956805 132957225 + HS6ST2-HS6ST2 chr3 58115791 58115792 - chr3 58116742 58116743 - prtcl/015,005,006,013 chrX 138857528 138857682 - chrX 139204056 139204250 + FGF13-FGF13 chrX 68192918 68192919 + chrX 68299096 68299097 - PHN1 large circular chr3 114693550 114693578 - chr3 114900301 114900324 + ZBTB20-ZBTB20 chr3 132027601 132027802 - chr10 11434665 11434686 + prtcl/147,022,038,013 chr3 132390413 132390532 - chr14 30617947 30618278 + prtcl/147005038 chr3 132357281 132357302 - chr16 81605362 81605403 - prtcl/141,147,038,005