# HG changeset patch
# User erasmus-medical-center
# Date 1502357907 14400
# Node ID 5348cfd3ba5c688ea5aeb03007c887de8fe7ac6c
# Parent  173ca9768e22ef6a47427452f34b62ddf3188a08
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/dr-disco commit b6ccc6d8a9a9061207040561b494b7cf2ee3f885

diff -r 173ca9768e22 -r 5348cfd3ba5c dr-disco_bam-extract.xml
--- a/dr-disco_bam-extract.xml	Fri Apr 28 03:56:08 2017 -0400
+++ b/dr-disco_bam-extract.xml	Thu Aug 10 05:38:27 2017 -0400
@@ -1,5 +1,6 @@
 <tool id="dr_disco_bam_extract" name="Dr. Disco (bam-extract)" version="@TOOL_VERSION@-g0">
     <description>Extracts reads from two targeted regions</description>
+
     <macros>
         <import>macros.xml</import>
     </macros>
@@ -11,14 +12,16 @@
         dr-disco bam-extract
             '$region1'
             '$region2'
+            '$input_alignment'
             '$output'
-            '$input_alignment'
     ]]></command>
+
     <inputs>
         <param name="input_alignment" type="data" format="bam" label="Discordant alignment file of STAR)" />
         <param name="region1" type="text" value="chr21:39737183-40035618" label="Genomic region 1" />
         <param name="region2" type="text" value="chr21:42834478-42882085" label="Genomic region 2" />
     </inputs>
+
     <outputs>
         <data name="output" format="bam" label="${tool.name} on ${input_alignment.name}" />
     </outputs>
diff -r 173ca9768e22 -r 5348cfd3ba5c dr-disco_classify.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/dr-disco_classify.xml	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,116 @@
+<tool id="dr_disco_classify" name="Dr. Disco (classify)" version="@TOOL_VERSION@-g0">
+    <description>Classifies detected break-points in RNA-seq based on corresponding statistics and blacklists</description>
+
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    
+    <expand macro="requirements"/>
+    <expand macro="version_command"/>
+    
+    <command detect_errors="exit_code"><![CDATA[
+        dr-disco
+            classify
+            
+                ${only_valid}
+                
+                #if $blacklist_regions:
+                    --blacklist-regions '${blacklist_regions}'
+                #end if
+
+                #if $blacklist_junctions:
+                    --blacklist-junctions '${blacklist_junctions}'
+                #end if
+                
+                '${dr_disco_detect_output}'
+                '${dr_disco_classify_output}'
+    ]]></command>
+
+    <inputs>
+        <param name="dr_disco_detect_output" type="data" format="tabular" label="Output of Dr. Disco Detect" />
+        <param name="only_valid" argument="--only-valid" truevalue="--only-valid" falsevalue="" type="boolean" />
+        
+        <param name="blacklist_regions"   argument="--blacklist-regions"   type="data" format="bed"     optional="True" label="Blacklist Regions"   help="List of regions known to be false positives (https://github.com/yhoogstrate/dr-disco/tree/master/share/)" />
+        <param name="blacklist_junctions" argument="--blacklist-junctions" type="data" format="tabular" optional="True" label="Blacklist Junctions" help="List of junctions know to be false positives (https://github.com/yhoogstrate/dr-disco/tree/master/share/)" />
+    </inputs>
+    
+    <outputs>
+        <data name="dr_disco_classify_output" format="tabular" label="${tool.name} on ${dr_disco_detect_output.name}" />
+    </outputs>
+    
+    <tests>
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" value="" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-01.out.dbed" ftype="tabular" />
+        </test>
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" value="--only-valid" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-02.out.dbed" />
+        </test>
+
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" />
+            <param name="blacklist_regions" value="blacklist-regions.hg38.bed" ftype="bed" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-03.out.dbed" ftype="tabular" />
+        </test>
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" />
+            <param name="blacklist_regions" value="blacklist-regions.hg38.bed" ftype="bed" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-04.out.dbed" />
+        </test>
+
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" />
+            <param name="blacklist_junctions" value="blacklist-junctions.hg38.txt" ftype="tabular" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-05.out.dbed" ftype="tabular" />
+        </test>
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" />
+            <param name="blacklist_junctions" value="blacklist-junctions.hg38.txt" ftype="tabular" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-06.out.dbed" />
+        </test>
+
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" />
+            <param name="blacklist_regions" value="blacklist-regions.hg38.bed" ftype="bed" />
+            <param name="blacklist_junctions" value="blacklist-junctions.hg38.txt" ftype="tabular" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-07.out.dbed" ftype="tabular" />
+        </test>
+        <test>
+            <param name="dr_disco_detect_output" value="classify_test_16.in.dbed" ftype="tabular" />
+            <param name="only_valid" />
+            <param name="blacklist_regions" value="blacklist-regions.hg38.bed" ftype="bed" />
+            <param name="blacklist_junctions" value="blacklist-junctions.hg38.txt" ftype="tabular" />
+
+            <output name="dr_disco_classify_output" file="classify_test_16.test-08.out.dbed" />
+        </test>
+    </tests>
+    
+    <help><![CDATA[
+
+**What it does**
+
+
+
+**Attributions**
+
+This work is part of Youri Hoogstrate's PhD thesis.
+
+    ]]></help>
+    
+     <expand macro="citations"/>
+</tool>
\ No newline at end of file
diff -r 173ca9768e22 -r 5348cfd3ba5c dr-disco_detect.xml
--- a/dr-disco_detect.xml	Fri Apr 28 03:56:08 2017 -0400
+++ b/dr-disco_detect.xml	Thu Aug 10 05:38:27 2017 -0400
@@ -1,4 +1,4 @@
-<tool id="dr_disco_intronic" name="Dr. Disco (intronic)" version="@TOOL_VERSION@-g0">
+<tool id="dr_disco_detect" name="Dr. Disco (detect)" version="@TOOL_VERSION@-g0">
     <description>Detects break-points in RNA-seq</description>
     <macros>
         <import>macros.xml</import>
@@ -11,8 +11,8 @@
         dr-disco
             detect
                 --min-e-score '${min_e_score}'
-                '${table_fusion_events}'
                 '${star_discordant_alignment_fixed}'
+                '${output_fusion_events}'
     ]]></command>
     <inputs>
         <param name="star_discordant_alignment_fixed" type="data" format="bam" label="Discordant alignment file of STAR (processed with dr-disco fix)" />
@@ -21,7 +21,7 @@
     </inputs>
     
     <outputs>
-        <data name="table_fusion_events" format="tabular" label="${tool.name} on ${$star_discordant_alignment_fixed.name}" />
+        <data name="output_fusion_events" format="tabular" label="${tool.name} on ${star_discordant_alignment_fixed.name}" />
     </outputs>
     
     <tests>
@@ -29,7 +29,7 @@
             <param name="star_discordant_alignment_fixed" value="detect.bam" />
             <param name="min_e_score" value="8" />
 
-            <output name="table_fusion_events" file="detect.txt" />
+            <output name="output_fusion_events" file="detect.txt" />
         </test>
     </tests>
     
diff -r 173ca9768e22 -r 5348cfd3ba5c dr-disco_fix.xml
--- a/dr-disco_fix.xml	Fri Apr 28 03:56:08 2017 -0400
+++ b/dr-disco_fix.xml	Thu Aug 10 05:38:27 2017 -0400
@@ -8,11 +8,15 @@
     <expand macro="version_command" />
 
     <command detect_errors="exit_code"><![CDATA[
-        dr-disco fix '${alignment_fixed}' '${star_discordant_alignment}'
+        dr-disco fix
+            '${star_discordant_alignment}'
+            '${alignment_fixed}'
     ]]></command>
+
     <inputs>
         <param name="star_discordant_alignment" type="data" format="bam" label="Discordant alignment file of STAR" />
     </inputs>
+
     <outputs>
         <data name="alignment_fixed" format="bam" label="${tool.name} on ${star_discordant_alignment}" />
     </outputs>
diff -r 173ca9768e22 -r 5348cfd3ba5c dr-disco_integrate.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/dr-disco_integrate.xml	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,57 @@
+<tool id="dr_disco_integrate" name="Dr. Disco (intronic)" version="@TOOL_VERSION@-g0">
+    <description>Merges corresponding genomic breaks and exon-to-exon junctions</description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    
+    <expand macro="requirements"/>
+    <expand macro="version_command"/>
+    
+    <command detect_errors="exit_code"><![CDATA[
+        dr-disco
+            integrate
+                #if $gtf:
+                    --gtf ${gtf}
+                #end if
+
+                '${dr_disco_classify_output}'
+                '${dr_disco_integrate_output}'
+    ]]></command>
+
+    <inputs>
+        <param name="dr_disco_classify_output" type="data" format="bam" label="Discordant alignment file of STAR (processed with dr-disco fix)" />
+        <param argument="--gtf" type="data" format="gtf" optional="True" label="GTF file (Optional: for predicting frame shifts)" help="This GTF file requires the following attributes annotated: gene_name, transcript_id and transcript_version"/>
+    </inputs>
+    
+    <outputs>
+        <data name="dr_disco_integrate_output" format="tabular" label="${tool.name} on ${dr_disco_classify_output.name}" />
+    </outputs>
+    
+    <tests>
+        <test>
+            <param name="dr_disco_classify_output" value="integrate_test_terg_s041.in.dbed" />
+            <param name="gtf" value="integrate_tmprss-erg.hg38.gtf" />
+
+            <output name="dr_disco_integrate_output" file="integrate_test_terg_s041.out.txt" />
+        </test>
+        <test>
+            <param name="dr_disco_classify_output" value="integrate_test_terg_s041.in.dbed" />
+            <param name="gtf" value="integrate_tmprss-erg.hg38.gtf" />
+
+            <output name="dr_disco_integrate_output" file="integrate_test_terg_s041.out.no-gtf.txt" />
+        </test>
+    </tests>
+    
+    <help><![CDATA[
+
+**What it does**
+
+
+**Attributions**
+
+This work is part of Youri Hoogstrate's PhD thesis.
+
+    ]]></help>
+    
+     <expand macro="citations"/>
+</tool>
\ No newline at end of file
diff -r 173ca9768e22 -r 5348cfd3ba5c macros.xml
--- a/macros.xml	Fri Apr 28 03:56:08 2017 -0400
+++ b/macros.xml	Thu Aug 10 05:38:27 2017 -0400
@@ -1,12 +1,12 @@
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="0.6.0">dr-disco</requirement>
+            <requirement type="package" version="0.9.0">dr-disco</requirement>
             <yield/>
         </requirements>
     </xml>
     
-    <token name="@TOOL_VERSION@">0.6.0</token>
+    <token name="@TOOL_VERSION@">0.9.0</token>
 
     <xml name="version_command">
         <version_command>dr-disco --version | head -n 1</version_command>
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/blacklist-junctions.hg38.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/blacklist-junctions.hg38.txt	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,992 @@
+chr-A	pos-A	direction-A	chr-B	pos-B	direction-B	id	comment
+chr10	10919999	10920000	-	chr10	11165485	11165486	+		s11324,s11386,s13304,s13768,s14437,s14455,s15679,s18020,s18730,s18751,s18758,s5960,s5961,s6408,s7310,s7431,s8612,s8615,s8828,s8971,s9067,s9578
+chr10	126970701	126970702	+	chr10	127127764	127127765	-		s4845,s6411,s6729,s6730,s6731,s7247,s10010,s11325,s11326,s11338,s11354,s11355,s11364,s11368,s11370,s11374,s11375,s11377,s11378,s11385,s11391,s11393,s11394,s11402,s11743,s11745,s11750,s11754,s11818,s13297,s13298r1,s13298r2,s13299r1,s13308,s13311,s13358,s13418,s13419,s13420,s13422,s13424,s13623,s13749,s13752,s13754,s13761,s13769,s14432,s14441,s14447,s14455,s14460,s14461,s15679,s15680,s15681,s18017,s18024,s18031,s18037,s18255,s18734,s18754,s20343,s20345,s20401,s20403,s20404,s4841,s4847,s4953,s4955,s4970,s5933,s5934,s5938,s5946,s5948,s5954,s5960,s5961,s6733,s7220,s7239,s7316,s7321,s7431,s8611,s8614,s8615,s8620,s8652,s8660,s8832,s8984,s9067,s9544,s9568,s9578,s9579,s9592,s9596,s9599,s9606,s9754,s9755,s9757,s9758,s9761,s9772,s9844
+chr10	126970701	126970702	+	chr10	127257429	127257430	-		prtcl/014,024,032
+chr10	17548348	17548349	+	chr12	85726659	85726660	-		s11744,s6729,s6730,s10011,s11324,s11355,s11383,s11386,s13297,s13298r1,s13298r2,s13306,s13428,s13626,s13749,s14460,s15681,s18017,s18020,s18031,s18037,s18151,s18758,s18759,s4970,s5942,s5947,s6727r1,s8652,s8965,s8984,s9004,s9544,s9568,s9585,s9761,s9775
+chr10	19790186	19790187	-	chr10	20001774	20001775	+		s6046,s11361,s11378,s11402,s11817,s13312,s13629,s13771,s14441,s18749,s5946,s5954,s5964,s9541,s9755,s9844
+chr10	27486892	27486967	-	chr12	11038658	11038787	-		s9759,s13307,s6408,s18022,s9064,s8982,s11377,s18037,s13629,s7428,s13424,s6732,s10014,s11326,s7217,s6729,s5954,s7250,s9757,s11367,s11402,s11375,s9597,s14461,s13428,s9754,s7240,s13421,s5947,s9589,s11355,s13299r2,s11384,s8830,s13299r1,s11750,s11745,s9568
+chr10	34516993	34517160	-	chr10	34814875	34814896	+		s13749,s13770,s9757,s8828,s4845,s6411,s6731,s7247,s7248,s10011,s10014,s11364,s11377,s11384,s13296,s13428,s14437,s18020,s18022,s18031,s18037,s5942,s5945,s5948,s6413,s6727r1,s7426,s8652,s8965,s8977,s8984,s9064,s9575,s9585,s9592,s9772
+chr10	38021018	38021427	-	chr10	42628376	42628399	-		s11391,s8978,s13312,s11359,s13426,s9582,s11326,s8981,s11760,s5961,s10010,s9757,s8652,s8971,s13307,s11743,s9761,s18017,s11368,s14461,s9575,s11383,s11386,s6046,s6411,s10011,s11324,s11325,s11338,s11354,s11355,s11360,s11364,s11365,s11367,s11375,s11378,s11380,s11384,s11385,s11397,s11402,s11745,s11750,s11751,s11762,s13296,s13297,s13298r1,s13298r2,s13299r1,s13310,s13311,s13422,s13622,s14447,s14455,s14460,s15680,s15681,s18024,s18031,s18037,s18748,s18749,s18759,s4953,s5938,s6727r1,s7314,s7321,s8660,s8977,s8980,s9004,s9541,s9568,s9578,s9596
+chr10	38021484	38021496	+	chr10	42628291	42628315	+		s9597,s8830,s11402,s13312,s9758,s11760,s11342,s11380,s13306,s13311,s18024,s18037,s6720,s7318,s8612,s9757,s6418,s20405,s11324
+chr10	50433475	50433476	+	chr10	50590247	50590248	-	SGMS1 large circular (1)	s6046,s6729,s6730,s7247,s7250,s11338,s11341,s11355,s11393,s11762,s13304,s13308,s13416,s13420,s13633,s13749,s13768,s13769,s13771,s14436,s14439,s18151,s18751,s20400,s4841,s4954,s5948,s6408,s6409,s6413,s7240,s8611,s8614,s8615,s8616,s8622,s8828,s8965,s9064,s9067,s9575,s9584,s9596,s9597,s9606,s9608,s9755,s9757,s9758,s9761
+chr10	50460672	50460673	+	chr10	50590247	50590248	-	SGMS1 large circular (2)	s6731,s11342,s11383,s13298r1,s13426,s14432,s18730,s5954,s5960,s7431,s9578
+chr10	52193235	52193236	+	chr10	52350007	52350008	-	SGMS1 large circular (3)	prtcl/043
+chr10	60279639	60279640	-	chr10	60733262	60733263	+		prtcl/007,011,015,019,025,026,039,125,147
+chr10	75438413	75438495	-	chr10	76036007	76036008	+		s18730,s11750,s13358,s8616,s14441,s18170,s6411,s6729,s6730,s6731,s7247,s7250,s11324,s11326,s11337,s11359,s11364,s11366,s11377,s11386,s11393,s11402,s11750,s11751,s11754,s11764,s13298r1,s13298r2,s13302,s13311,s13358,s13416,s13418,s13426,s13427,s13428,s13622,s13749,s13752,s13755,s13770,s14432,s14435,s14436,s14441,s15679,s18020,s18022,s18031,s18037,s18170,s18730,s18758,s20401,s4847,s4955,s4970,s4975,s5930,s5961,s6016,s6409,s6720,s6721,s6727r1,s6733,s7217,s7314,s7316,s7318,s7321,s7427,s7427r2,s7428,s7431,s7454,s8614,s8615,s8616,s8623,s8660,s8828,s8971,s8977,s9004,s9064,s9065,s9544,s9571,s9575,s9578,s9584,s9592,s9606,s9608,s9755,s9757,s9758,s9761,s9772,s9775,s9777,s9844,s9845
+chr10	77404023	77404024	-	chr10	77637264	77637265	+		prtcl/008,014,025,026,033,125,143
+chr11	96093517	96093518	-	chr11	96342907	96342908	+		prtcl/015,038,147,151
+chr12	23896024	23896027	-	chr12	24213342	24277241	+	SOX5-SOX5 (1)	s11324,s11340,s11354,s11355,s11361,s11366,s11368,s11375,s11378,s11385,s11393,s11397,s11399,s11402,s11745,s11756,s11760,s11762,s11817,s13296,s13307,s13310,s13312,s13416,s13419,s13626,s13629,s13631,s13633,s13768,s13770,s14434,s14436,s14441,s14442,s14447,s14455,s14460,s15679,s18020,s18022,s18024,s18031,s18037,s18749,s18751,s18758,s20401,s20404,s20405,s4951,s4955,s4970,s5938,s6408,s6409,s6411,s6413,s6418,s6730,s7241,s7247,s7310,s7314,s7431,s7433r2,s7454,s8614,s8615,s8618,s8623,s8828,s8832,s8971,s8977,s9063,s9064,s9067,s9464,s9541,s9575,s9578,s9596,s9597,s9754,s9755,s9757,s9758,s9761
+chr1	243270091	243270092	+	chr1	243426558	243426559	-	SDCCAG8 large circular (1)	s11751,s13622,s13761,s13768
+chr1	243293090	243293091	+	chr1	243426558	243426559	-	SDCCAG8 large circular (2)	s6411,s7247,s7248,s7250,s11338,s11355,s11365,s11754,s11819,s13296,s13297,s13299r2,s13422,s13426,s13428,s13623,s13625,s13768,s14437,s14442,s18020,s18024,s18037,s18151,s18748,s18751,s20343,s20344,s5960,s6408,s7431,s7433r2,s8615,s8622,s8830,s8832,s8965,s9063,s9064,s9066,s9544,s9575,s9578,s9579,s9596,s9608,s9761
+chr1	243304712	243304713	+	chr1	243426558	243426559	-	SDCCAG8 large circular (3)	s6730,s6731,s11751,s11820,s13307,s13622,s13626,s14432,s18022,s5961,s7211,s8616,s9585,s9755
+chr1	243307988	243307989	+	chr1	243426558	243426559	-	SDCCAG8 large circular (4)	s13629,s4958,s6733
+chr1	243316754	243316755	+	chr1	243426558	243426559	-	SDCCAG8 large circular (5)	s11324,s11365,s13296,s13631,s14442,s14460,s18730,s18749
+chr1	243512323	243512324	+	chr1	243695716	243695717	-	AKT3 large circular (1)	
+chr1	243512323	243512324	+	chr1	243843282	243843283	-	AKT3 large circular (2)	
+chr1	243545509	243545510	+	chr1	243695716	243695717	-	AKT3 large circular (3)	
+chr1	243545509	243545510	+	chr1	243843282	243843283	-	AKT3 large circular (4)	
+chr1	243552728	243552729	+	chr1	243843282	243843283	-	AKT3 large circular (5)	
+chr1	243563719	243563720	+	chr1	243843282	243843283	-	AKT3 large circular (6)	
+chr1	243572925	243572926	+	chr1	243843282	243843283	-	AKT3 large circular (7)	
+chr1	243613670	243613671	+	chr1	243843282	243843283	-	AKT3 large circular (8)	
+chr1	243637610	243637611	+	chr1	243843282	243843283	-	AKT3 large circular (9)	
+chr1	243645892	243645893	+	chr1	243843282	243843283	-	AKT3 large circular (10)	
+chr1	243664771	243664772	+	chr1	243843282	243843283	-	AKT3 large circular (11)	
+chr1	243683196	243683197	+	chr1	243843282	243843283	-	AKT3 large circular (12)	
+chr1	243695590	243695591	+	chr1	243843282	243843283	-	AKT3 large circular (13)	
+chr12	66596927	66596928	-	chr12	67069049	67069050	+		s6729,s6730,s10011,s10014,s11326,s11338,s11365,s11751,s13298r1,s13298r2,s13299r1,s13311,s13418,s13622,s14436,s18020,s18022,s18031,s18037,s4841,s6016,s6727r1,s8652,s8830,s8965,s8977,s9064,s9464,s9575,s9592,s9608
+chr12	70286837	70286838	+	chr12	70288280	70288281	+		s6729,s10011,s11365,s11391,s13310,s13625,s14461,s15679,s18759,s7239,s8982,s9575,s9758
+chr12	77572266	77572267	-	chr12	77940318	77940319	+		s11355,s11365,s11370,s11377,s11391,s11394,s11762,s13304,s13306,s13308,s13419,s13422,s13623,s13626,s13629,s13631,s13768,s14434,s18017,s18022,s18024,s18037,s18259,s18734,s18748,s18751,s18758,s18759,s20342,s7239,s7318,s8615,s8622,s9062,s9063,s9066,s9575,s9608
+chr12	94582538	94582539	-	chr12	94818089	94818090	+		s4845,s4845r2,s6730,s6731,s7247,s10011,s11326,s11354,s13299r1,s13419,s13420,s13768,s14461,s18020,s18748,s20345,s20400,s4847,s5954,s5961,s6408,s6413,s8611,s8614,s8622,s8965,s8984,s9758,s9775
+chr12	94582538	94582539	-	chr12	94873639	94873640	+		13418,s13761,s13771,s14434a
+chr13	107210755	107210756	-	chr13	107865681	107865682	+	FAM155A-FAM155A (1)	s4845R,s6046R,s6411R,s6729R,s6731R,s7247R,s7248R,s7249R,s7250R,s10011,s11325,s11326,s11338,s11342,s11355,s11365,s11377,s11378,s11384,s11385,s11386,s11750,s11751,s11754,s11760,s11817,s11820,s13304,s13306,s13307,s13308,s13310,s13358,s13422,s13426,s13428,s13619,s13622,s13629,s13752,s13755,s13771,s14432,s14434,s14436,s14437,s14439,s14441,s14442,s14460,s14461,s15681,s18020,s18022,s18024,s18031,s18037,s18730,s18748,s18754,s18758,s18759,s4847,s4951,s4970,s4975,s5930,s5933,s5938,s5948,s5954,s5961,s6016,s6408,s6409,s6413,s6684,s6722,s6733,s7217,s7220,s7239,s7240,s7316,s7428,s7431,s8608,s8612,s8614,s8615,s8618,s8622,s8623,s8660,s8830,s8977,s8980,s8981,s8982,s9004,s9063,s9066,s9464,s9473,s9575,s9578,s9584,s9589,s9592,s9596,s9599,s9606,s9608,s9754,s9755,s9758,s9761,s9772,s9775
+chr13	39343715	39344055	-	chr13	39600830	39600887	+	LHFP-LHFP (1)	s6018,s4955,s7239,s13771,s13428,s13310,s11750,s11337,s13426,s11364,s9845,s13631,s18170,s8623,s13752,s18259,s7426,s8620,s13302,s13308,s11393,s5950,s9592,s13418,s4083R,s11762,s13296,s18751,s4951,s5947,s6406,s9575,s9775
+chr13	39378421	39378527	-	chr13	39600831	39600844	+	LHFP-LHFP (2)	s9761,s9592,s8971,s13761,s13304,s11324,s13298r1,s13421,s13749,s14437,s14442,s15679,s18020,s18037,s4955,s4975,s5961,s6722,s74092,s7431,s74332,s8612,s8828,s9064,s9571,s9579,s9757
+chr13	96091569	96091570	-	chr13	96832489	96832490	+	HS6ST3-HS6ST3 (1)	s6046,s7249,s11338,s11360,s11361,s11364,s11365,s11375,s11394,s11397,s11760,s11818,s11820,s13299r1,s13299r2,s13304,s13307,s13308,s13312,s13358,s13418,s13419,s13424,s13426,s13427,s13631,s13754,s13768,s13769,s13771,s14434,s14436,s15680,s15681,s18022,s18031,s18748,s18749,s18751,s18759,s20401,s20405,s4951,s4953,s4954,s4957,s4958,s5947,s6721,s7239,s7241,s8608,s8612,s8614,s8615,s8616,s8965,s8977,s9063,s9464,s9473,s9541,s9575,s9579,s9582,s9608,s9759
+chr14	105588190	105588412	-	chr14	105708681	106810491	+		s18022,s11324,s5961,s5930,s7321,s11355,s11324,s11324,s7247R,s7427,s7427r2,s7247R,s74092,s7321,s14441,s7321,s13304,s13426,s7321,s8660,s6406,s8614,s8828,s11341,s18017,s11354,s13311,s8828,s6731,s7427,s7427r2,s7321,s8828,s6018,s7247R,s9579,s6406,s11326,s5954,s7431,s8611,s4954,s13755,s8618,s74332,s7321,s13629,s13311,s13626,s8965,s6406,s11386
+chr14	105625872	105865458	-	chr14	105860433	106851320	+		s14437,s7321,s8830,s4847,s11386,s6413,s4845r2,s4845,s9578,s11750,s8832,s7321,s4847,s4847,s74092,s11338,s14442,s6413,s6413,s74092,s9579,s6409,s8614,s6409,s6731,s14437,s7217,s18020,s18017,s11743,s13416,s6730R,s11355,s13633,s13419,s8615,s11750,s6730,s8618,s9544,s7310,s8615,s8616,s7321,s5954,s9757,s13755,s8660,s7321,s8620,s11750,s8980,s11324,s18758,s4847,s11324,s13311,s8965,s9578,s8830,s13416,s8618,s14442,s8828,s13311,s74092,s7427,s7427r2,s6730R,s15681,s74092,s13298r1,s7427,s7427r2,s13755,s7431,s7427,s7427r2,s6722,s6413,s11341,s5934,s4954,s5934,s13420,s5934,s7310,s11341,s8660,s9775,s13754,s13768,s4958,s9772,s11326,s9064,s6406,s7247,s5934,s6406,s6413,s14437,s6729,s11818,s5948,s13749,s6727r1,s18007,s7321,s13428,s11394,s13299r1,s14442,s13299r1,s7247R,s8660,s74092,s6729R,s9063,s4958,s14455,s4958,s9589,s4958,s8607,s11326,s7217,s11324,s6730,s5950,s18024,s11818,s9597,s13299r1,s7250,s9758,s7426,s9772,s6731,s8979,s4845,s9775,s6722
+chr14	20343075	20343409	-	chr14	49586570	49586875	+		
+chr14	20343075	20343409	-	chr14	49586570	49586875	-		prtcl/303
+chr14	20343075	20343409	+	chr14	49586570	49586875	+		prtcl/355
+chr14	20343075	20343409	-	chr14	49862552	49862850	-		
+chr14	20343075	20343409	+	chr14	49862552	49862850	-		prtcl/345
+chr14	20343075	20343409	-	chr14	49862552	49862850	+		prtcl/416,349,329
+chr14	25919546	25919547	-	chr14	26126156	26126157	+	new gene	s6046,s11338,s11369,s11370,s11383,s11391,s11399,s11402,s11754,s13312,s13416,s13420,s13761,s13768,s18758,s20345,s7241,s7314,s7318,s8971,s9842,s9845
+chr14	29725674	29725675	-	chr14	29926965	29926966	+		prtcl/007,016,024,032,033,038,141,147
+chr14	29725674	29725675	-	chr14	29927248	29927249	+		prtcl/005,006,008,011,021,025,036,039,143
+chr14	33055904	33055905	+	chr14	33215426	33215427	-	NPAS3 large circular (1)	s6411
+chr14	33215181	33215182	+	chr14	33367268	33367269	-	NPAS3 large circular (3)	s7248,s11324,s11338,s13304,s13424,s13768,s14439,s5954,s8623,s8828,s9585,s9592,s9606,s9755,s9847
+chr14	33215181	33215182	+	chr14	33560210	33560211	-	NPAS3 large circular (2)	s13304
+chr1	43593627	43593628	-	chr1	43594215	43594216	-		s4845,s6046,s6411,s6729,s6730,s6731,s7248,s7250,s10010,s10011,s10014,s11324,s11325,s11326,s11336,s11338,s11340,s11341,s11342,s11354,s11355,s11359,s11360,s11361,s11364,s11365,s11366,s11369,s11370,s11374,s11375,s11377,s11380,s11383,s11384,s11385,s11391,s11393,s11394,s11397,s11399,s11402,s11743,s11744,s11745,s11751,s11754,s11756,s11820,s13296,s13297,s13298r1,s13298r2,s13299r1,s13299r2,s13302,s13304,s13306,s13307,s13308,s13310,s13311,s13312,s13358,s13416,s13418,s13419,s13420,s13421,s13422,s13426,s13427,s13428,s13625,s13626,s13629,s13633,s13749,s13752,s13768,s14432,s14434,s14435,s14436,s14439,s14441,s14447,s14455,s14460,s14461,s15679,s15681,s18017,s18020,s18022,s18024,s18031,s18170,s18748,s18749,s18751,s18754,s18759,s20401,s20403,s4836,s4841,s4951,s4953,s4954,s4955,s4957,s4958,s4970,s5933,s5934,s5938,s5942,s5945,s5946,s5947,s5950,s5956,s6016,s6018,s6406,s6408,s6409,s6413,s6719,s6720,s6722,s6727r1,s7220,s7239,s7240,s7310,s7314,s7318,s7321,s74092,s7426,s7428,s7431,s74332,s7454,s8611,s8616,s8618,s8622,s8652,s8830,s8832,s8965,s8977,s8978,s8979,s8980,s8982,s8984,s9001,s9004,s9064,s9066,s9541,s9544,s9568,s9571,s9575,s9579,s9585,s9589,s9597,s9608,s9755,s9757,s9758,s9759,s9761,s9772,s9844,s9845
+chr14	42980422	42980423	-	chr14	43185163	43185164	+	new	gene	s11338,s11342,s11359,s11360,s11377,s11378,s11380,s11402,s11744,s11745,s11820,s13304,s13306,s13308,s13424,s13426,s13427,s13631,s13752,s13755,s13770,s14437,s14439,s15679,s18007,s18151,s18748,s18754,s18758,s20400,s4953,s4954,s5947,s5964,s6418,s7239,s7241,s7314,s7318,s7454,s8607,s8614,s8618,s8971,s8977,s9001,s9544,s9596,s9599,s9608
+chr14	43185223	43185224	-	chr14	43473045	43473046	+	new	gene	s6046,s11337,s11366,s11380,s11383,s11385,s11399,s11402,s11745,s11754,s11764,s11820,s13307,s13358,s13426,s13633,s13755,s14434,s14436,s14455,s15681,s18170,s20400,s5947,s5960,s6418,s7310,s7318,s7454,s8618,s8828,s8977,s9001,s9544,s9578,s9608
+chr14	71413947	71413948	+	chr14	71529370	71529371	-		s10014,s13311,s13622,s13749,s14435,s14439,s5934,s6729,s6730,s6731,s7247,s7248,s7250,s7316,s8611,s8612,s8618,s8623,s9064,s9585,s9592,s9606,s9775
+chr14	79697629	79697630	+	chr14	79805190	79805191	-		prtcl/025,038,140
+chr15	39071608	39071609	-	chr15	39420543	39420544	+		prtcl/015,141,143,147,149
+chr15	60678686	60678687	-	chr15	61229052	61229053	+		prtcl/004,005,006,007,011,014,016,020,021,025,026,032,037,039,040,125,145,147,149
+chr15	71411700	71411830	-	chr15	71660520	71660615	+		prtcl/038,145,005,039,147,143,125,014,020,035,037,149
+chr1	61088148	61088149	+	chr1	61277585	61277586	-	circular>1mb	s13768,s14432,s14436,s5960,s7318,s74092,s8616,s8828,s9066,s9067,s9596,s9761,s9844
+chr1	61088148	61088149	+	chr1	61359274	61359275	-	circular>1mb	s8618,s9579
+chr16	11020192	11020193	+	chr16	11126146	11126147	-		prtcl/021,031,037,125
+chr16	78432752	78432753	-	chr16	78779328	78779329	+		s8971,s11754,s8971,s10011,s11324,s11326,s11336,s11341,s11342,s11355,s11359,s11365,s11368,s11370,s11374,s11377,s11380,s11383,s11384,s11385,s11391,s11399,s11744,s11750,s11751,s11754,s11760,s13296,s13297,s13298r2,s13299r1,s13299r2,s13304,s13418,s13420,s13424,s13427,s13619,s13622,s13625,s13629,s13631,s13632,s13633,s13749,s13755,s13768,s13770,s13771,s14432,s14434,s14435,s14437,s14441,s14442,s14455,s14461,s15680,s15681,s18017,s18020,s18022,s18037,s18259,s18730,s18749,s18751,s18758,s18759,s20345,s20401,s20405,s4836,s4841,s4845,s4951,s4955,s4958,s4970,s4975,s5938,s5942,s5946,s5947,s5948,s5950,s5954,s5964,s6018,s6046,s6408,s6409,s6411,s6413,s6418,s6684,s6722,s6729,s6730,s6731,s7240,s7241,s7247,s7248,s7249,s7250,s7314,s7321,s74092,s7427,s7427r2,s7428,s7431,s7454,s8607,s8612,s8615,s8616,s8618,s8622,s8623,s8660,s8830,s8832,s8965,s8971,s8978,s8980,s8981,s8982,s8984,s9004,s9063,s9064,s9065,s9066,s9464,s9568,s9571,s9575,s9578,s9579,s9585,s9596,s9606,s9758,s9772,s9775,s9842,s9844,s9845,s9847
+chr16	78432752	78432753	-	chr16	79211607	79211608	+	WWOX-WWOX (1)	s4845,s6046,s6411,s6729,s6730,s6731,s7247,s7248,s7249,s7250,s10011,s11324,s11326,s11336,s11341,s11342,s11355,s11359,s11365,s11368,s11370,s11374,s11377,s11380,s11383,s11384,s11385,s11391,s11399,s11744,s11750,s11751,s11754,s11760,s13296,s13297,s13298r2,s13299r1,s13299r2,s13304,s13418,s13420,s13424,s13427,s13619,s13622,s13625,s13629,s13631,s13632,s13633,s13749,s13755,s13768,s13770,s13771,s14432,s14434,s14435,s14437,s14441,s14442,s14455,s14461,s15680,s15681,s18017,s18020,s18022,s18037,s18259,s18730,s18749,s18751,s18758,s18759,s20345,s20401,s20405,s4836,s4841,s4951,s4955,s4958,s4970,s4975,s5938,s5942,s5946,s5947,s5948,s5950,s5954,s5964,s6018,s6408,s6409,s6413,s6418,s6684,s6722,s7240,s7241,s7314,s7321,s74092,s7427,s7427r2,s7428,s7431,s7454,s8607,s8612,s8615,s8616,s8618,s8622,s8623,s8660,s8830,s8832,s8965,s8971,s8978,s8980,s8981,s8982,s8984,s9004,s9063,s9064,s9065,s9066,s9464,s9568,s9571,s9575,s9578,s9579,s9585,s9596,s9606,s9758,s9772,s9775,s9842,s9844,s9845,s9847
+chr16	82627001	82627138	-	chr16	83032009	83032132	+	CDH13 missing exon (1)	s8978,s8611,s9597,s7248,s13761,s13424,s6728,s11366,s5933,s7310,s13428,s9772,s14436,s7240,s11745,s11370,s4951,s7241,s13622,s13304,s14437,s10011,s13306,s15681,s6727r1,s6406,s6731,s11378,s7314,s9844,s8616,s9544,s11364,s11393,s18037,s9001,s13633,s5956,s8965,s9845,s13771,s8607
+chr16	82627045	82627138	-	chr16	82858361	82858451	+	CDH13 missing exon (2)	s13622,s14439,s4975,s8614,s11354,s7426,s74332,s8832,s8623
+chr16	85357643	85357644	-	chr16	85648551	85648552	+		prtcl/006,013,020,025,125
+chr18	4151282	4151283	-	chr18	4455005	4455006	+		prtcl/001,003,004,005,007,008,011,013,014,015,016,019,020,021,022,025,032,033,035,036,037,038,039,125,141,143,145,147,149
+chr18	58044532	58044709	-	chr18	58245426	58245442	+		prtcl/147,007,039
+chr18	7567891	7567892	-	chr18	7774148	7774149	+		prtcl/003,015,020
+chr1	92563641	92563642	+	chr1	92704744	92704745	-		prtcl/008,015,026,032,040
+chr20	14002330	14085729	-	chr20	14684842	14684924	+	MACROD2-MACROD2 (1)	s0405,s063,s1340,s1369,s1394,s1399,s1402,s239,s310,s318,s3296,s3297,s3629,s4442,s614,s622,s719,s7247,s727r1,s8037,s8170,s8749,s982
+chr20	53256404	53256445	-	chr20	53487143	53487287	+	TSHZ2-TSHZ2	s10011,s11324,s11325,s11326,s11338,s11341,s11355,s11370,s11375,s11385,s11386,s11393,s11743,s11762,s13296,s13304,s13306,s13308,s13310,s13311,s13358,s13416,s13419,s13420,s13421,s13422,s13625,s13626,s13631,s13633,s13749,s13766,s13768,s13770,s14434,s14436,s14437,s14447,s14455,s14460,s15679,s15680,s18017,s18020,s18022,s18031,s18037,s18151,s18259,s18730,s18754,s18758,s20342,s20401,s20403,s4833,s4836,s4845,s4951,s4953,s4955,s4957,s4970,s5930,s5938,s5942,s5947,s5948,s5954,s5960,s5961,s6018,s6046,s6408,s6409,s6413,s6684,s6722,s6727r1,s6729,s6730,s6731,s6732,s6733,s7211,s7238,s7241,s7247,s7248,s7250,s7310,s7409r2,s7428,s7431,s7433r2,s8611,s8612,s8614,s8615,s8616,s8618,s8622,s8623,s8652,s8828,s8832,s8965,s8971,s9063,s9064,s9065,s9066,s9067,s9473,s9568,s9575,s9578,s9579,s9584,s9585,s9597,s9757,s9758,s9761,s9775
+chr20	8132750	8132751	-	chr20	8371381	8371382	+	PLCB1-PLCB1 (1)	prtcl/025,026
+chr20	8150371	8150372	-	chr20	8371381	8371382	+	PLCB1-PLCB1 (1)	prtcl/001,004,024
+chr20	8371450	8371451	-	chr20	8628293	8628294	+	PLCB1-PLCB1 (1)	031,152,141
+chr21	26001836	26001837	-	chr21	26002391	26002392	-		s4833,s4845,s6411,s6729,s6730,s7247,s7248,s7250,s10010,s10011,s10014,s11337,s11354,s11355,s11357,s11360,s11361,s11364,s11366,s11367,s11377,s11380,s11385,s11386,s11391,s11393,s11394,s11402,s11743,s11744,s11750,s11751,s11754,s11756,s11760,s13296,s13298r1,s13298r2,s13299r1,s13302,s13307,s13308,s13310,s13311,s13416,s13421,s13424,s13427,s13428,s13623,s13625,s13626,s13633,s13749,s14434,s14447,s14455,s14460,s15679,s15680,s15681,s18020,s18751,s18754,s18759,s20345,s20401,s20405,s4841,s4951,s4953,s4975,s5938,s5947,s5950,s5961,s6408,s6409,s6418,s6720,s6727r1,s6733,s7211,s7217,s7238,s7241,s7310,s7316,s7318,s7431,s7433,s7454,s8611,s8612,s8616,s8622,s8623,s8652,s8660,s8832,s8965,s8971,s8977,s8978,s8979,s8982,s8984,s9001,s9064,s9065,s9544,s9578,s9597,s9757,s9758
+chr21	26001843	26001844	+	chr21	26002385	26002386	+		s4833,s4845,s6411,s6729,s6730,s6731,s7247,s7248,s7250,s10010,s10011,s10014,s11324,s11325,s11326,s11337,s11338,s11342,s11354,s11355,s11359,s11360,s11361,s11364,s11366,s11367,s11368,s11369,s11370,s11374,s11375,s11377,s11378,s11380,s11383,s11384,s11385,s11386,s11391,s11394,s11397,s11399,s11402,s11743,s11744,s11745,s11750,s11751,s11754,s11756,s11760,s11762,s11764,s11818,s11820,s13297,s13298r1,s13298r2,s13299r1,s13299r2,s13302,s13304,s13306,s13307,s13308,s13310,s13311,s13312,s13416,s13418,s13419,s13420,s13421,s13422,s13424,s13426,s13427,s13428,s13619,s13622,s13623,s13625,s13629,s13631,s13633,s13749,s13768,s13770,s14432,s14434,s14436,s14437,s14439,s14441,s14442,s14447,s14455,s14460,s14461,s15679,s15680,s15681,s18017,s18020,s18024,s18031,s18037,s18151,s18170,s18259,s18730,s18734,s18748,s18749,s18751,s18754,s18758,s18759,s20400,s20401,s20403,s20405,s4841,s4953,s4954,s4955,s4957,s4958,s4970,s4975,s5930,s5932,s5933,s5938,s5942,s5945,s5947,s5948,s5954,s5960,s6016,s6406,s6408,s6409,s6418,s6684,s6719,s6720,s6722,s6727r1,s6727r2,s6728,s6732,s7217,s7220,s7239,s7241,s7310,s7314,s7316,s7318,s7321,s7409,s7428,s7431,s7433,s8611,s8612,s8614,s8615,s8616,s8620,s8652,s8660,s8828,s8830,s8965,s8971,s8977,s8978,s8979,s8980,s8981,s8982,s8984,s9001,s9004,s9063,s9064,s9066,s9067,s9473,s9541,s9568,s9575,s9578,s9579,s9585,s9589,s9592,s9597,s9606,s9608,s9754,s9755,s9757,s9758,s9759,s9761,s9772,s9775,s9777,s9844,s9845
+chr21	35580929	35580930	-	chr21	35814945	35814946	+		s18017,s18031,s6018,s7220,s9575,s9579,s7248,s10011,s18031,s6722,s7321,s9568,s9758,s9777
+chr2	13609161	13609162	-	chr2	13837689	13837690	+		prtcl/001,003,004,005,006,007,008,011,013,015,016,019,020,022,024,025,032,033,036,037,038,039,125,141,143,145,147,149
+chr2	138299537	138299538	-	chr2	138500754	138500755	+		prtcl/006,014,022,024,036,143,147,151
+chr2	186215090	186215091	-	chr2	186456714	186456715	+		prtcl/003,004,011,015,019,022,024,025,032,036,037,125,143,145
+chr2	197805339	197805340	-	chr2	198088857	198088858	+	PLCL1-PLCL1	(1)	prtcl/006,014,024
+chr22	22026122	22713198	-	chr22	22893779	22922721	+	interesting-region	s4083,s4845,s6411,s6730,s6731,s7247,s7250,s10010,s10011,s10014,s11324,s11325,s11326,s11338,s11341,s11355,s11375,s11384,s11386,s11393,s11399,s11743,s11817,s11818,s13298r1,s13298r2,s13299r1,s13299r2,s13304,s13306,s13311,s13358,s13416,s13418,s13419,s13421,s13426,s13427,s13428,s13622,s13626,s13629,s13631,s13633,s13749,s13768,s13769,s13770,s14436,s14441,s14442,s14455,s14460,s14461,s15679,s15680,s15681,s18017,s18020,s18022,s18031,s18151,s18255,s18259,s18730,s18749,s18754,s18758,s20344,s4836,s4841,s4951,s4954,s4955,s4957,s4958,s5930,s5934,s5938,s5942,s5947,s5948,s5950,s5954,s5956,s5961,s6016,s6018,s6408,s6409,s6413,s6684,s6727r1,s7238,s7240,s7310,s7314,s7321,s7409r2,s7426,s7431,s7433r2,s8611,s8616,s8618,s8620,s8828,s8971,s8980,s8982,s8984,s9001,s9063,s9064,s9066,s9464,s9473,s9541,s9544,s9568,s9575,s9578,s9579,s9582,s9585,s9589,s9597,s9599,s9608,s9755,s9757,s9758,s9761,s9770,s9772,s9777
+chr22	22099211	22099212	-	chr22	22904989	22904990	+		s11750,s13296,s18017,s18022,s18759,s4955,s4958,s4970,s6016,s8611,s8618,s8623,s9063,s9066,s9578,s9772,s5950
+chr22	22322793	22322973	-	chr22	22893779	22922592	+		s11336,s6408,s6046,s6411,s11386,s5930,s5934,s7240,s8971,s8828,s9758,s7433,s6729,s9063,s9845,s10011,s11324,s13424,s15680,s4836,s4955,s5964,s6684,s7431,s8618,s8622,s8652,s8660,s8830,s8982,s9473,s9575,s9777,s13298r1,s13769,s8980,s9064,s13358,s5950,s11750,s18754,s14434,s13426,s9578,s14437,s9608,s9606,s13755,s9066,s5961,s8623,s11341,s13622,s13768,s8965,s7250,s11338,s11374,s13629,s13749,s15681,s18758,s5948,s5954,s9584,s13428,s11355,s11397,s11745,s13311,s13419,s18022,s18748,s20342,s4951,s9001,s9585,s9589,s6018,s9772,s13420,s9067,s6408,s9568,s6413
+chr22	22343490	22395491	-	chr22	22893781	22906373	+		s13622,s7433a2,s7427,s7427r2,s9579,s9464,s9777,s13298r1,s13298r2,s13769,s4954,s7240,s5930,s9473,s6727r1,s11384,s13420,s9608,s13426,s20401,s8982,s13302,s8614,s9597,s4958,s13428,s9772,s9473,s4955,s11324,s5961,s9775,s11745,s6408
+chr22	22410125	22410287	-	chr22	22893780	22921398	+		s4836,s14434,s13416,s13419,s13749,s18748,s4970,s9578,s9597,s9608,s9757,s13768,s14442,s18031,s10011,s13298r1,s8984,s6729,s5950,s15679,s8832
+chr22	22410281	22410282	-	chr22	22893782	22893783	+		s11324,s11338,s11393,s11399,s13304,s13311,s13426,s13754,s18017,s20345,s4083,s48452,s4955,s4958,s5954,s5961,s6016,s6729,s7431,s74332,s8614,s8618,s8623,s9067,s9758,s9845
+chr22	32814337	32814338	+	chrX	17050119	17050120	+		s11378,s11385,s11744,s11751,s11760,s13310,s14434,s14461,s18017,s18022,s18024,s5938,s8620,s8978
+chr2	61905739	61905859	-	chr2	62135830	62135955	+	COMMD1-COMMD1 (1)	s11338,s11359,s13422,s13623,s13761,s20405,s4833,s5947,s6729,s7239,s7250,s8660,s9004,s9063,s9473,s9541,s9578,s9589,s9772,s9844
+chr2	88857072	88861996	-	chr2	88886151	90248408	-	IG Kappa Light Chain
+chr2	88857072	88861996	-	chr2	88886151	90248408	+	IG Kappa Light Chain
+chr2	88857241	88860606	-	chr2	89085174	89330117	+		s13420,s6411a,s6727r1,s8622,s11393,s15681,s20401,s5942,s4975,s9067,s13754,s13632,s11399,s13416,s7427,s7427r2,s9584,s13426,s11341,s9770,s9599,s6411,s6018,s11818,s8980,s18259,s13632,s9066,s6728,s11399,s7239,s4954,s5945,s18020,s18748,s5954,s5950,s13426,s8623,s15680,s7248a,s5961,s13427,s4975,s7314,s9064,s7250a,s13298r2,s14435,s10010,s9754,s9464,s6728,s13421,s7314,s4975,s9584,s9754,s8616,s8979
+chr2	88857317	88861924	-	chr2	88885620	90221313	-		s11760,s13427,s11360,s9847,s6418,s6719,s13307,s4970,s11370,s20342,s9759,s13622,s4970,s9775,s5948,s6018,s6411,s8660,s4975,s6731,s7426,s20344,s9541,s13419,s13632,s13416,s9596,s11399,s8612,s8623,s7426,s7316,s7321,s4955,s8611,s11374,s18020,s74332,s7211,s8612,s5964,s8980,s14442,s6018,s20345,s6406,s7426,s5930,s5942,s74092,s11374,s8618,s7211,s6409,s9777,s13418,s9772,s5930,s13768,s6731,s13419,s13419
+chr2	97194725	97194726	+	chr2	97547535	97547536	+		s6411,s6729,s10011,s11326,s11336,s11340,s11367,s11383,s11386,s11751,s13299r1,s13416,s14447,s18020,s18022,s18031,s18170,s18759,s20404,s6016,s8652,s8965,s8980,s9575,s9589,s9759,s9772
+chr2	99752301	99752302	-	chr2	100006631	100006632	+		s11337a,s11393a,s11399a,s13358a,s13755a,s14447a,s4957a,s5950a,s7318a,s8828a,s8971a
+chr2	99837476	99837477	+	chr2	100011571	100011572	-		s11354a,s11399a,s11745a,s13766a,s14435a,s14439a,s14461a,s15681a,s18748a,s4953a,s9063a,s9464a,s9589a,s9754a,s9755a,s9845a
+chr3	114380216	114380217	+	chr3	114900342	114900343	-		prtcl/007,013,019,021,025,037,038,125
+chr3	114693527	114693528	+	chr3	114900342	114900343	-	ZBTB20 large circular(1)	prtcl/005,007,126
+chr3	116086434 	116086557	-	chr3	116442541	116442542	+		prtcl/025,031
+chr3	116086434 	116086557	-	chr3	116444876	116444892	+		prtcl/004,005,007,008,011,013,019,032,125,141,143,145,149
+chr3	116444955	116444956	-	chr3	117997181	117997182	+		prtcl/003,005,006,007,008,011,013,015,016,020,021,022,024,025,031,032,033,035,036,037,038,039,040,125,143,145,147
+chr3	117729179	117729180	-	chr3	117997181	117997182	+		prtcl/007,016,025,032,125,143
+chr3	131723625	131723626	-	chr3	132034566	132034567	+		prtcl/001,003,004,005,007,011,015,016,019,022,024,026,033,036,037,038,039,040,141,143,145,147,149
+chr3	131723625	131723626	-	chr3	132037556	132037557	+	CPNE4-CPNE4	prtcl
+chr3	132040321	132040322	-	chr3	132259660	132259661	+		prtcl/039,011,014,015,024,026,032,036,037,040,141,147
+chr3	132040321	132040322	-	chr3	132259783	132259784	+		prtcl/011,014,015,024,026,032,036,037,040,141,147,151
+chr3	132044500	132044501	-	chr3	132259783	132259784	+		prtcl/001,013,022,025,031,038,143,145,149
+chr3	174859353	174864091	-	chr3	175096789	175096897	+		s4957,s6729,s6731,s7249,s10011,s11337,s11338,s11341,s11359,s11367,s11370,s11378,s11383,s11385,s11397,s11399,s11745,s13306,s13312,s13420,s13426,s13629,s13769,s14437,s14439,s14447,s14460,s15680,s18037,s18255,s18748,s20404,s4836,s4847,s5930,s5932,s5934,s5938,s5964,s6418,s6722,s7217,s7220,s7238,s7316,s7431,s8623,s8828,s8971,s8978,s9064,s9066,s9541,s9579,s9584,s9596,s9597,s9761,s9842,s9844,s9845,s13771,s13755,s13752,s6411,s9754,s13749,s6733,s13299r1,s6409
+chr3	175096789	175096790	+	chr3	175324325	175324326	-		prtcl/001,026,147
+chr3	188153363	188154253	-	chr3	188406111	188406231	+	LPP-LPP (1)	s10010,s10011,s10014,s11324,s11325,s11338,s11364,s11365,s11368,s11383,s11386,s11393,s11394,s11397,s11743,s11744,s11745,s11750,s11751,s11756,s11817,s13296,s13297,s13298r2,s13299r1,s13299r2,s13302,s13304,s13306,s13308,s13310,s13311,s13312,s13358,s13416,s13419,s13421,s13422,s13619,s13622,s13623,s13626,s13633,s13752,s13755,s13761,s13768,s13770,s14432,s14434,s14435,s14439,s14441,s14447,s14460,s15680,s15681,s18017,s18020,s18022,s18024,s18031,s18151,s18259,s18730,s18748,s18754,s18758,s18759,s20404,s4083,s4833,s4836,s4841,s4847,s4955,s4970,s5930,s5932,s5934,s5945,s5947,s5956,s6016,s6046,s6411,s6413,s6727r1,s6730,s6731,s7220,s7238,s7241,s7247,s7248,s7250,s7314,s7318,s7321,s7426,s7427,s7427r2,s8612,s8614,s8618,s8652,s8828,s8965,s8971,s8977,s8982,s9001,s9004,s9064,s9067,s9473,s9568,s9575,s9579,s9585,s9589,s9592,s9597,s9608,s9757,s9844
+chr3	78938927	78938928	-	chr3	79589823	79589824	+		prtcl/024,025,026,038
+chr3	84959668	84959669	-	chr3	85802046	85802047	+		prtcl/001,011,022,024,025,026,037,038,149
+chr3	99818042	99818044	-	chr3	100146972	100146976	+	CMSS1-CMSS1 (1)	s4845,s11378,s13299r1,s4975,s5942,s5945,s9758,s6729,s6730,s11325,s13298r2,s13299r2,s13428,s13623,s13626,s13749,s14432,s14460,s18020,s18022,s18037,s18151,s18759,s20344,s5934,s7238,s7318,s8652,s8660,s8965,s8980,s9004,s9064,s9065,s9571,s9575,s9757,s9761
+chr4	14477458	14477459	-	chr4	14700742	14700743	+	novel gene	s11337,s11338,s11360,s11369,s11370,s11377,s11383,s11384,s11393,s11743,s11818,s13306,s13307,s13308,s13312,s13358,s13416,s13626,s13629,s13755,s13768,s13769,s13770,s14432,s14435,s14436,s14439,s14441,s14455,s14461,s15679,s18007,s18024,s20345,s4954,s5946,s5956,s7238,s7318,s7433,s8608,s8622,s8828,s9464,s9541,s9589,s9596,s9597,s9757,s9759,s9761,s9844,s9845,s9847
+chr4	30920261	30920370	-	chr4	31142472	31142473	+		s9579,s11324,s74332,s9597,s4833,s6046,s11364,s11377,s11754,s11817,s11819,s13304,s13358,s13416,s13422,s13426,s13625,s13626,s13629,s13631,s13749,s13768,s13771,s14432,s14436,s14437,s18022,s18749,s18751,s18759,s4970,s7239,s7310,s74092,s7428,s7454,s8614,s8615,s8652,s9004,s9473,s9575,s9584,s9592
+chr4	61201765	61201766	-	chr4	61497120	61497121	+		prtcl/306,314,329
+chr4	61934839	61934840	+	chr4	62044549	62044550	-		prtcl/306,314,347
+chr4	94875900	94875901	-	chr4	95104407	95104408	+		prtcl/001,003,005,007,011,024,025,033,038,039,141,143,145,147,149
+chr5	137140595	137140700	-	chr5	137498365	137498425	+		prtcl/011,143,005,040,036,141
+chr5	137267050	137267060	-	chr5	137498365	137498425	+		prtcl/001,015,033,035,125,145,149
+chr5	155728990	155728991	-	chr5	156123855	156123856	+		prtcl/007,011,013,022,038
+chr5	155870424	155870425	-	chr5	156123855	156123856	+		prtcl/024,125,147,151
+chr5	59215968	59215969	-	chr5	59893167	59893168	+	PDE4D-PDE4D (1)	s13312,s7248,s7250,s10014,s11341,s11357,s11366,s11391,s13296,s13298r1,s13299r1,s13299r2,s13312,s13416,s13418,s13420,s13633,s13768,s14455,s18017,s18749,s18758,s20345,s4975,s5934,s6409,s6727r1,s6727r2,s6728,s6732,s7217,s7426,s8611,s8616,s8652,s8965,s8982,s9001,s9064,s9568,s9575,s9579,s9585,s9592,s9758,s9842,s9844,s9847
+chr5	59215968	59215969	-	chr5	59988487	59988488	+		prtcl/001,003,004,005,011,014,015,016,019,021,022,024,032,036,037,039,125,141,143,145,147,149
+chr5	59382411	59382412	-	chr5	59768246	59768247	+	PDE4D-PDE4D (2)	s11355,s5961
+chr5	59382411	59382412	-	chr5	59988487	59988488	+	PDE4D-PDE4D (3)	s13299r1,s13299r2,s14455,s20345
+chr5	59685943	59685944	-	chr5	59988487	59988488	+	PDE4D-PDE4D (4)	s11366,s11819,s14455,s6727r1,s6728,s8965,s9064
+chr5	60185687	60185688	-	chr5	60487943	60487944	+	PDE4D-PDE4D (5)	s6729,s7248,s10014,s11357,s11366,s18749,s4975,s5942,s5948,s6727r1,s8965,s9064,s9842
+chr6	16522626	16522627	+	chr6	16753347	16753348	-	ATXN1 large circular (1)	prtcl/008,125,004,032,038,039,151,152
+chr6	16585779	16585780	+	chr6	16753347	16753348	-	ATXN1 large circular (2)	prtcl/008,125,004,032,038,039,151,152
+chr6	16585779	16585780	+	chr6	16754091	16754092	-	ATXN1 large circular (3)	prtcl/008,125,004,032,038,039,151,152
+chr6	1726512	1726513	-	chr6	1930102	1930103	+	GMDS-GMDS (1)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	1726512	1726513	-	chr6	1959866	1959867	+	GMDS-GMDS (2)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	1742511	1742512	-	chr6	1959890	1959891	+	GMDS-GMDS (3)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	1742586	1742587	-	chr6	1952031	1952032	+	GMDS-GMDS (4)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	1742586	1742587	-	chr6	1959866	1959867	+	GMDS-GMDS (5)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	1742586	1742587	-	chr6	1959867	1959868	+	GMDS-GMDS (6)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	1742586	1742587	-	chr6	1959891	1959892	+	GMDS-GMDS (7)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	1742586	1742587	-	chr6	2115770	2115771	+	GMDS-GMDS (8)	s11325,s13296,s13297,s13299r1,s13311,s13422,s13626,s13749,s14432,s18020,s18022,s18024,s18031,s18170,s5934,s6728,s6729,s6732,s7220,s7310,s7318,s7321,s7409r2,s7431,s7454,s8982,s8984,s9772
+chr6	20781144	20781145	+	chr6	20955585	20955586	-	CDKAL1 large circular (1)	s4833,s4845,s6730,s7248,s7250,s11394,s13304,s13428,s13749,s13770,s14437,s15680,s15681,s4841,s4975,s5942,s6408,s6727r1,s6727r2,s6728,s7427,s7427r2,s7428,s8618,s9001,s9592
+chr6	20781144	20781145	+	chr6	21065228	21065229	-	CDKAL1 large circular (2)	s11819,s8612,s8982,s10014,s13297,s15679,s5948
+chr6	37820016	37820017	-	chr6	38061592	38061593	+		s10011,s10014,s11324,s11325,s11338,s11360,s11364,s11377,s11386,s11393,s11402,s11745,s11751,s11760,s13297,s13298r1,s13298r2,s13299r1,s13302,s13304,s13306,s13307,s13308,s13310,s13311,s13312,s13358,s13418,s13420,s13421,s13422,s13424,s13426,s13625,s13626,s13632,s13633,s13749,s13752,s13754,s13755,s13761,s13770,s13771,s14434,s14435,s14447,s14461,s15679,s15681,s18017,s18020,s18022,s20401,s20403,s20404,s4841,s5930,s5934,s5938,s5942,s5946,s5950,s5961,s6046,s6409,s6722,s6727r1,s6730,s6731,s7239,s7241,s7247,s7248,s7318,s7321,s7431,s7433,s8614,s8615,s8618,s8623,s8652,s8660,s8828,s8965,s8971,s8977,s8982,s9001,s9063,s9064,s9067,s9568,s9575,s9579,s9585,s9597,s9606,s9608,s9755,s9761,s9844
+chr6	87506448	87507940	-	chr20	53404941	53405106	-	SLC35A1-TSHZ2	s10010,s11338,s11364,s11375,s11378,s11384,s11743,s11750,s11751,s11760,s11764,s13296,s13302,s13308,s13311,s13416,s13421,s13623,s13626,s13629,s13631,s13768,s13770,s15680,s18020,s18031,s18037,s18170,s18759,s4833,s4954,s4970,s4975,s5938,s5946,s6016,s6411,s7318,s7433r2,s8965,s8979,s9761,s9772
+chr6	87506448	87507940	+	chr20	53404941	53405106	+	SLC35A1-TSHZ2	s10010,s11338,s11364,s11375,s11378,s11384,s11743,s11750,s11751,s11760,s11764,s13296,s13302,s13308,s13311,s13416,s13421,s13623,s13626,s13629,s13631,s13768,s13770,s15680,s18020,s18031,s18037,s18170,s18759,s4833,s4954,s4970,s4975,s5938,s5946,s6016,s6411,s7318,s7433r2,s8965,s8979,s9761,s9772
+chr7	11636961	11636962	-	chr7	12094652	12094653	+		prtcl/008,025,151
+chr7	146116973	146116974	-	chr7	146774270	146774271	+		prtcl/001,003,004,005,007,008,011,013,015,016,019,020,021,022,024,025,032,033,037,038,039,040,125,141,143,145,147,149
+chr7	157682756	157682938	-	chr7	157898670	157898700	+		prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147
+chr7	157682756	157682938	-	chr7	158081290	158081325	+		prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147
+chr7	158205210	158205280	-	chr7	158587550	158587620	+		prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147
+chr7	158316800	158316940	-	chr7	158587550	158587620	+		prtcl/040,022,014,003,037,149,003,019,024,025,035,032,038,019,125,147
+chr7	18162349	18162350	-	chr7	18496261	18496262	+	HDAC9-HDAC9 (1)	s11743,s13416,s13424,s13428,s13770,s13771,s14434,s14436,s4955,s5954,s6413,s8614,s8623,s8982,s9582,s9592
+chr7	26201744	26201769 	+	chr15	40561980	40562772	+		s11324,s11338,s11354,s11365,s11384,s11385,s11386,s11744,s11750,s11751,s11756,s11764,s11819,s13296,s13297,s13311,s13312,s13418,s13422,s13424,s13428,s13622,s13768,s13770,s14432,s14435,s14436,s14439,s14441,s15679,s15680,s15681,s18017,s18020,s18022,s18024,s18259,s18730,s18749,s18751,s18759,s4845,s5933,s5961,s6046,s6413,s6722,s6730,s6731,s7240,s7310,s7318,s7321,s7409r2,s7427,s7427r2,s7431,s8614,s8618,s8620,s8623,s8660,s8828,s8830,s8965,s8982,s8984,s9064,s9066,s9473,s9589,s9592,s9596,s9597,s9606,s9757,s9758,s9761,s9772,s9775,s6730
+chr7	55773180	55773181	+	chr7	56021118	56021119	+		prtcl/007,026,140,143,145
+chr7	67304075	67304236	+	chr7	102378887	102378888	+		s8984,s13296,s13619,s13631,s14434,s18734,s18751,s8622,s8830,s13629,s13422,s13632,s18748,s7239,s7318,s8616,s9066,s18730,s14442,s18758
+chr7	67304407	67304444	-	chr7	102378674	102378875	-		s6411,s11394,s11754,s11756,s13297,s13626,s18748,s18751,s9063,s13304,s8616,s13311
+chr9	123757702	123757703	+	chr9	123879021	123879022	-		prtcl/003,007,011,038,040,125,140,141
+chr9	17933025	17933026	-	chr9	18163861	18163862	+			prtcl/329,345,349,383
+chr9	41230099	41235015	-	chr9	63818084	63823161	-		s132981,s15679,s11377,s11764,s13625,s11754,s6411,s11377,s13304,s18022,s11764,s13625,s15681,s11762,s18748,s13296,s18024,s4958,s8984,s9770,s15681,s9606,s6721,s8608,s13626,s4970
+chr9	41254111	41254122	+	chr9	62818021	62818478	-		s11751,s11377,s7428,s13297,s6411-,s18037,s11384,s13298r2,s10010,s18024,s11360,s13298r1,s13625,s8652,s14455,s18017,s11380,s4953,s18031,s9589
+chr9	9442088	9442294	+	chr9	35657753	35657995	+		
+chr9	9442088	9442294	-	chr9	35657753	35657995	-		prtcl/347
+chrX	124963817	124963818	-	chrX	125184707	125184708	+		prtcl/004,005,006,007,008,011,014,015,019,022,024,025,032,033,036,037,038,039,040,125,140,143,145,149,151
+chr3	65622088	65622089	-	chr3	65902596	65902597	+		prtcl
+chr3	65622088	65622089	-	chr3	66037995	66037996	+		prtcl
+chr3	65745588	65745589	-	chr3	66037995	66037996	+		prtcl
+chr3	76311417	76311418	-	chr3	77098013	77098014	+		prtcl
+chr3	107129992	107129993	-	chr3	107482199	107482200	+		prtcl
+chr3	114500351	114500352	+	chr3	114900342	114900343	-	ZBTB20-ZBTB20	prtcl
+chr3	116801300	116801301	-	chr3	117997181	117997182	+		prtcl
+chr3	117009374	117009375	-	chr3	117997181	117997182	+		prtcl
+chr3	117339787	117339788	-	chr3	117997181	117997182	+		prtcl
+chr3	131989516	131989517	+	chr3	131994540	131994541	+	suspected mistake in ref genome	prtcl
+chr3	132040321	132040322	-	chr3	132267464	132267465	+	new gene	prtcl
+chr3	132040321	132040322	-	chr3	132320573	132320574	+	new gene	prtcl
+chr3	132044500	132044501	-	chr3	132267464	132267465	+	new gene	prtcl
+chr3	132044500	132044501	-	chr3	132320573	132320574	+	new gene	prtcl
+chr3	136398748	136398749	+	chr3	136502779	136502780	-	STAG1 large circular	prtcl
+chr3	140176073	140176074	-	chr3	140385560	140385561	+	CLSTN2 splice variant	prtcl
+chr3	140176073	140176074	-	chr3	140403628	140403629	+	CLSTN2 splice variant	prtcl
+chr3	160756707	160756708	-	chr3	160961735	160961736	+	PPM1L splice variant	prtcl
+chr3	172112451	172112452	+	chr3	172251541	172251542	-	FNDC3B large circular	prtcl
+chr3	175096789	175096790	+	chr3	175256530	175256531	-	NAALADL2 large circular	prtcl
+chr3	188225527	188225528	-	chr3	188484591	188484592	+	LPP splice variant	prtcl
+chr3	188406111	188406112	+	chr3	188524787	188524788	-	LPP large circular	prtcl
+chr3	2098978	2098979	-	chr3	2571415	2571416	+	CNTN4 splice variant	
+chr3	2099630	2099631	-	chr3	2339177	2339178	+	CNTN4 new exon splice variant	
+chr3	71299819	71299820	+	chr3	71493555	71493556	-	FOXP1 large circular	
+chr3	71359244	71359245	-	chr3	71581548	71581549	+	FOXP1 splice variant	
+chr3	85511898	85511899	-	chr3	85802046	85802047	+	CADM2 splice variant	
+chr4	147847150	147847151	+	chr4	147955374	147955375	-	ARHGAP10 large circular (1)	
+chr4	147857552	147857553	+	chr4	147966839	147966840	-	ARHGAP10 large circular (2)	
+chr4	28215148	28215149	-	chr4	28476449	28476450	+	new gene	
+chr4	94875830	94875831	+	chr4	94996134	94996135	-	BMPR1B large circular (1)	
+chr4	95335552	95335632	-	chr4	95548733	95548751	+	UNC5C-UNC5C	prtcl/015,040,016
+chr5	107427509	107427510	-	chr5	107669641	107669642	+	EFNA5-EFNA5	
+chr5	108021001	108021002	-	chr5	108224120	108224121	+	FBXL17-FBXL17	
+chr5	108186116	108186117	+	chr5	108348530	108348531	-	FBXL17-FBXL17 large circular (1)
+chr5	156124019	156124020	-	chr5	156344488	156344489	+		prtcl/015,039,147,151
+chr5	165007412	165007413	-	chr5	165348897	165348898	+		prtcl/007,013,015,024,032,126,141,143,147,148,151
+chr5	165778074	165778075	-	chr5	166083747	166083748	+	new gene	prtcl/141
+chr5	165778074	165778075	-	chr5	166104099	166104100	+	new gene	prtcl/015
+chr5	165778074	165778075	-	chr5	166218189	166218190	+	new gene	prtcl/126
+chr5	167073356	167073357	-	chr5	167284763	167284764	+	new gene	prtcl/001,032,141,151
+chr5	168883336	168883337	-	chr5	169193478	169193479	+	SLIT3-SLIT3 (1)
+chr5	59215830	59215975	-	chr5	59768246	59768265	+	PDE4D-PDE4D	prtcl/147,008,151,026,152
+chr5	59468435	59468436	-	chr5	59988487	59988488	+	PDE4D-PDE4D	prtcl/021,022,147,151
+chr5	60278164	60278165	-	chr5	60487941	60487942	+	PDE4D-PDE4D/PART1	prtcl/005,141,147,149
+chr5	88905208	88905209	+	chr5	89095029	89095030	-	MAF2C-AS1 circular	
+chr6	110667433	110667434	+	chr6	110773937	110773938	-	CDK19 circular	
+chr6	156829226	156829227	+	chr6	156935576	156935577	-	ARID1B circular	
+chr6	16485971	16485972	+	chr6	16754746	16754747	-	ATXN1 circular new exon	
+chr6	16522626	16522627	+	chr6	16657901	16657902	-	ATXN1 circular	
+chr6	20781144	20781145	+	chr6	21000372	21000373	-	CDKAL1 circular	
+chr7	110663721	110663722	-	chr7	110886592	110886593	+	IMMP2L-IMMP2L
+chr7	110663721	110663722	-	chr7	110963499	110963500	+	IMMP2L-IMMP2L
+chr7	110663450	110963566	-	chr7	111417258	111417259	+	IMMP2L-IMMP2L
+chr7	122663569	122663570	-	chr7	122885998	122885999	+	CADPS2-CADPS2
+chr7	146839820	146839855	-	chr7	147043910	147043940	+		prtcl/151,039,025
+chr7	71132830	71133045	-	chr7	71335540	71335580	+		prtcl/008,144,039,126,149"
+chr8	127006618	127006619	-	chr8	127339280	127339281	+		prtcl/004,143
+chr8	140024079	140024080	-	chr8	140252776	140252777	+	TRAPPC9-TRAPPC9	
+chr8	140761164	140761165	+	chr8	140890769	140890770	-	PTK2 circular (1)	
+chr8	140789473	140789474	+	chr8	140890769	140890770	-	PTK2 circular (2)	
+chr8	19506130	19506131	-	chr8	19757185	19757186	+	CSGALNACT1 new exon	
+chr8	42906172	42906173	+	chr8	43018494	43018495	-	HOOK3 large circular	
+chr9	10033790	10033791	-	chr9	10340962	10340963	+	PTPRD-PTPRD	
+chr9	10033790	10033791	-	chr9	10612397	10612398	+	PTPRD-PTPRD	
+chr9	10102328	10102329	-	chr9	10340962	10340963	+	PTPRD-PTPRD new exon	
+chr9	10341017	10341018	-	chr9	10612397	10612398	+	PTPRD-PTPRD	
+chr9	17309057	17309058	+	chr9	17416189	17416190	-	CNTLN large circular	
+chr9	20715321	20715322	+	chr9	20823115	20823116	-	FOCAD large circular	
+chr9	37126311	37126312	+	chr9	37327834	37327835	-	ZCCHC7 large circular	
+chr9	77794462	77794463	+	chr9	77922345	77922346	-	GNAQ large cicular	
+chr10	112668998	112669010	-	chr10	112888734	112888735	+	VTI1A new exon	
+chr10	115120184	115120185	+	chr10	115241725	115241726	-	ATRNL1 large circular	
+chr10	115120184	115120185	+	chr10	115426302	115426303	-	ATRNL1 large circular	
+chr10	115120184	115120185	+	chr10	115549536	115549537	-	ATRNL1 large circular	
+chr10	115120184	115120185	+	chr10	115847991	115847992	-	ATRNL1 large circular	
+chr10	115215696	115215697	+	chr10	115315736	115315737	-	ATRNL1 large circular	
+chr10	115215696	115215697	+	chr10	115334419	115334420	-	ATRNL1 large circular	
+chr10	115549536	115549537	-	chr10	115847876	115847877	+	ATRNL1-ATRNL1	
+chr10	121790168	121790169	+	chr10	121924329	121924330	-	ATE1 large circular	
+chr10	18150975	18150976	-	chr10	18401923	18401924	+	CACNB2-CACNB2	
+chr10	34470263	34470264	-	chr10	34696317	34696318	+	PARD3-PARD3	
+chr10	45862985	45862986	+	chr10	45964871	45964872	-	LOC728407 large circular	
+chr10	472549	472550	-	chr10	689493	689494	+	DIP2C-DIP2C	
+chr10	486530	486531	-	chr10	689493	689494	+	DIP2C-DIP2C	
+chr10	60279550	60279650	-	chr10	60508470	60733335	+		prtcl/013,005,003,004,038,149
+chr10	7243557	7243558	+	chr10	7381949	7381950	-	normal	SFMBT2 large circular
+chr10	7276891	7276892	+	chr10	7381949	7381950	-	normal	SFMBT2 large circular
+chr10	75512777	75512778	-	chr10	76036007	76036008	+		prtcl/003,007,022,025,036,037,039,125,126,140,143,144,145,147,151
+chr10	77403900	77404025	-	chr10	77637260	77637345	+		prtcl/007,013,015,024,040,144,151
+chr11	102832906	102832907	-	chr11	103048413	103048414	+		prtcl/006,021,038,040,140
+chr11	112961664	112961665	-	chr11	113204285	113204286	+	NCAM1-NCAM1
+chr11	1480885	1480886	-	chr11_KI270830v1_alt	16635	16636	+		prtcl/001,013,021,022,032,036,037,141,143,144,147,148
+chr11	17878207	17878208	+	chr11	18008076	18008077	-	SERGEF large circular	
+chr11	17878207	17878208	+	chr11	18010139	18010140	-	SERGEF large circular	
+chr11	23652394	23652395	-	chr11	24043634	24043635	+		prtcl/001,015,038
+chr11	62841770	62841790	-	chr11	65500025	65505145	-		prtcl/125,040,140,035,007,008,152,024
+chr11	84534731	84534732	-	chr11	85111660	85111661	+	DLG2-DLG2	
+chr11	84534731	84534732	-	chr11	85154555	85154556	+	DLG2-DLG2	
+chr12	116096668	116096669	+	chr12	116237705	116237706	-	MED13L large circular	
+chr12	1289851	1289852	+	chr12	1408247	1408248	-	ERC large circular	
+chr12	19132392	19132393	+	chr12	19257537	19257538	-		PLEKHA5 large circular	
+chr12	20370244	20370245	-	chr12	20613442	20613443	+	PDE4A-PDE4A	
+chr12	41194188	41194189	-	chr12	41506455	41506456	+	PDZRN4-PDZRN4
+chr12	85424204	85424205	-	chr12	85702880	85702881	+	prtcl/003,015,038
+chr13	100262728	100262729	+	chr13	100368574	100368575	-	PCCA large circular	
+chr13	100301459	100301460	+	chr13	100449305	100449306	-	PCCA large circular	
+chr13	66631411	66631412	-	chr13	67225404	67225405	+	PCDH9-PCDH9
+chr13	69838975	69838976	+	chr13	69975802	69975803	-	KLHL1 large circular	
+chr13	71557023	71557024	+	chr13	71681910	71681911	-	DACH1 large circular	
+chr13	75621762	75621763	+	chr13	75727098	75727099	-	LMO7 large circular	
+chr13	93227545	93227625	-	chr13	93545255	93545285	+		prtcl/024,016,125,148
+chr13	93545421	93545422	-	chr13	93830153	93830154	+	GPC6-GPC6
+chr14	37817577	37817578	+	chr14	37968588	37968589	-	new large circular	
+chr14	37867360	37867361	+	chr14	37968588	37968589	-	new large circular	
+chr14	37868445	37868446	+	chr14	37968588	37968589	-	new large circular	
+chr15	20239401	20239402	+	chr15	21047860	21047861	+	new large circular	
+chr15	71256715	71256716	-	chr15	71660529	71660530	+	THSD4-THSD4	
+chr15	77252366	77252367	+	chr15	77365225	77365226	-	PEAK1 large circular	
+chr16	47497398	47497399	+	chr16	47610920	47610921	-	PHKB large circular	
+chr16	7304485	7304486	-	chr16	7518146	7518147	+		prtcl/008,035,125
+chr16	85371278	85371279	-	chr16	85633913	85633914	+	new exon in GSE1	
+chr16	85371278	85371279	-	chr16	85648551	85648552	+	new exon in GSE1	
+chr17	61084564	61084565	-	chr17	61368326	61368327	+	BCAS3-BCAS3	
+chr18	13278104	13278105	+	chr18	13438384	13438385	-	LDLRAD4 large ciruclar	
+chr18	13387762	13387763	-	chr18	13621116	13621117	+	LDLRAD4-LDLRAD4	
+chr18	26501250	26501251	-	chr18	26703391	26703392	+	KCTD1-PCAT18 readthrough	
+chr18	44701174	44701175	+	chr18	44869283	44869284	-	SETBP1 large circular
+chr18	74630966	74630967	+	chr18	74781502	74781503	-	ZNF407 large circular
+chr19	617634	617635	+	chr19	15902499	15902500	-		prtcl/040,125,126
+chr20	14684959	14684960	-	chr20	15229930	15229931	+	MACROD2-MACROD2 alignment artefact	
+chr20	8371450	8371451	-	chr20	8628294	8628295	+	PLCB1-PLCB1
+chr21	14857708	14857709	-	chr21	15064744	15064745	+	NRIP1 missing exon	
+chr21	28228478	28228479	-	chr21	28446289	28446290	+		prtcl/140,145,152"
+chr22	33650668	33650669	-	chr22	33919994	33919995	+	LARGE-LARGE	
+chrX	22743343	22743344	-	chrX	23064037	23064038	+	RP11-40F8.2-RP11-40F8.2 alignment artefact	
+chrX	31968514	31968515	-	chrX	32216915	32216916	+	DMD1-DMD	
+chrX	42318552	42318553	-	chrX	42581218	42581219	+	prtcl/020,015,038	
+chrX	65075912	65075913	-	chrX	65366637	65366638	+	prtcl/003,019,024,025,026,038,039,126,145,147,149,151,126	
+chr1	173240023	173240024	-	chr1	173462323	173462324	+	NR_037845-NR_037845	
+chr1	21002712	21002713	+	chr1	21111383	21111384	-	EIF4G3 large circular	
+chr1	219193081	219193082	+	chr1	219295151	219295152	-	prtcl/125,015,038,019
+chr1	224974090	224974091	+	chr1	225097239	225097240	-	DNAH14 large circular	
+chr1	247640429	247640430	-	chr1	247860616	247860617	+		prtcl/038,022,019,149
+chr1	46815264	46815265	-	chr1	47029989	47029990	+	CYP4B1-CYP4X1 readthrought	prtcl/015,125
+chr1	57970865	57970866	-	chr1	58253806	58253807	+	DAB1 readthrough	prtcl/033,015,019,022,038
+chr1	58262580	58262581	-	chr1	58506059	58506060	+		prtcl/005,006,016,125,148,152,140
+chr1	61277519	61277520	+	chr1	61406727	61406728	-	NFIA large circular	
+chr1	63774508	63774509	-	chr1	64049690	64049691	+	ROR1-ROR1	
+chr1	72466386	72466387	-	chr1	72749165	72749166	+	new gene	prtcl/140,015,019,022,038
+chr1	72519188	72519189	-	chr1	72749165	72749166	+	new gene	prtcl/140,015,019,022,038
+chr1	8495062	8495063	+	chr1	8614686	8614687	-	RERE large circular	
+chr1	85358847	85358848	-	chr1	85577983	85577984	+	DDAH1-DDAH1	
+chr2	10685919	10685920	+	chr2	10686880	10686910	+	normal	prtcl/149/015/038
+chr2	168012633	168012634	+	chr2	168129758	168129759	-	STK39 large circular
+chr2	18644300	18644301	-	chr2	18919212	18919213	+		prtcl/007,148"
+chr2	18688328	18688329	-	chr2	18919212	18919213	+		prtcl/145,147"
+chr2	204686282	204686283	-	chr2	204914450	204914451	+	PARD3B-PARD3B new exon	
+chr2	24564294	24564295	+	chr2	24683128	24683129	-	NCOA1 large circular new exon	
+chr2	94211974	94211975	-	chr2_KI270772v1_alt	44348	44349	-		prtcl/008,031,125
+chr6	8558643	8558644	-	chr6	8784151	8784152	+	RP11-315C16.1-RP11-315C16.1	basis
+chr6	51407584	51407585	+	chr6	159750864	159750865	+		basis
+chr6	16485971	16485972	+	chr6	16753347	16753348	-	ATXN1 large circular	basis
+chr6	51407584	51407585	+	chr6	159750864	159750865	+		s6731,s7248,s10014,s11324,s11359,s11364,s11365,s11368,s11393,s11394,s11820,s13297,s13298r1,s13299r1,s13299r2,s13304,s13418,s13625,s18020,s18754,s4970,s4975,s8660,s8978,s9575,s9579,s9592,s9755,s9757,s9844
+chrX	7929413	7929414	-	chrX	8228334	8228335	+	s6731,s11383,s11385,s11394,s11751,s11756,s13297,s13298r1,s13298r2,s13299r1,s13311,s13422,s13426,s13622,s13623,s6409,s6732,s6733,s7239,s7241,s7409,s8652,s8828,s8965,s8971,s9592
+chrX	136668062	136668063	+	chrX	136781148	136781149	-		
+chrX	104658995	104658996	-	chrX	105195474	105195475	+	
+chr6	8558643	8558644	-	chr6	8784190	8784191	+
+chr6	71585215	71585216	-	chr17	41524998	41524999	-
+chr6	32641288	32643160	+	chr6	32741525	32746417	-	alignment artefact homologue HLA-DQA1/2
+chr6	31224527	31224528	-	chr6	31530620	31530621	+	maps to highly simlar region
+chr6	29944136	29944139	-	chr6	31355375	31355385	-	HLA-A/B
+chr6	24683762	24683763	+	chr22	32533808	32533809	-	
+chr6	24683650	24683780	-	chr22	32531900	32532015	+	
+chr6	21668899	21668900	-	chr6	21909469	21909470	+	CASC15-CASC15
+chr5	97431900	97431901	-	chr5	97668550	97668551	+	
+chr5	96379652	96379653	-	chr5	96675538	96675539	+	
+chr5	73960499	73960500	-	chr21	26019655	26019656	-	
+chr5	67214577	67214578	-	chr5	67619790	67619791	+	new gene
+chr5	67215104	67215105	-	chr5	67619790	67619791	+	new gene
+chr5	67216597	67216598	-	chr5	67619790	67619791	+	new gene
+chr5	67244662	67244663	-	chr5	67619790	67619791	+	new gene
+chr5	53886713	53886714	-	chr5	54111387	54111388	+	ARL15-ARL15
+chr5	53886713	53886714	-	chr5	54113201	54113202	+	ARL15-ARL15
+chr5	143333796	143333797	+	chr10	28523584	28523587	+	
+chr5	129107062	129107063	-	chr5	129343668	129343669	+	
+chr4	9601620	9601621	-	chr12	32100478	32100479	-	
+chr4	9601617	9601618	-	chr6	88382558	88382559	-
+chr4	77557485	77557486	+	chr17	14033725	14033726	-	
+chr11	1599121	1599122	+	chr11	71561140	71561141	+	
+chr11	5709255	5709256	-	chr11	5937400	5937401	+	
+chr11	96092296	96092297	-	chr11	96342907	96342908	+	MAML2-MAML2
+chr11	96093511	96093512	-	chr11	96341382	96341383	+	MAML2-MAML2
+chr11	96093517	96093518	-	chr11	96299457	96299458	+	MAML2-MAML2
+chr11	96093517	96093518	-	chr11	96339636	96339637	+	MAML2-MAML2
+chr11	96093517	96093518	-	chr11	96341382	96341383	+	MAML2-MAML2
+chr11	96093517	96093518	-	chr11	96341539	96341540	+	MAML2-MAML2
+chr11	309080	330930	+	chr11	320635	320660	+	FITM2-FITM3 readthrough
+chr11	308180	308300	-	chr11	320690	320735	-	FITM2-FITM3 readthrough
+chr11	9083003	9083004	-	chr11	83317876	83317877	-
+chr16	15027035	15027036	+	chr16	70013773	70013774	+	PDXC1-PDXC2P
+chr16	29226896	29226897	+	chr16	88192912	88192913	+	
+chr16	29110508	29110509	-	chr16	87978487	87978488	+	
+chr16	15027035	15027036	+	chr16	70013773	70013774	+
+chr16	78164289	78164290	-	chr16	78424869	78424870	+	WWOX-WWOX
+chr16	78432752	78432753	-	chr16	78996201	78996202	+	WWOX-WWOX
+chr15	63071207	63071208	+	chr15	81323670	81323671	-	
+chr15	39071608	39071609	-	chr15	39600844	39600845	+	
+chr11	18269714	18269715	+	chr11	35488325	35488326	-	
+chr11	17788413	17788414	-	chr11	17988596	17988597	+	SERGEF-SERGEF
+chr11	131370463	131370897	-	chr11	132146273	132146523	+	NTM-NTM
+chr11	106177330	106177331	-	chr11	106409142	106409143	+	new gene
+chr11	106177330	106177331	-	chr11	106532684	106532685	+	new gene
+chr12	116022465	116022602	-	chr12	116237468	116237609	+	MED13L-MED13L
+chr13	75621762	75621763	+	chr13	75761038	75761039	-
+chr13	50433550	50433551	-	chr13	50712537	50712538	+	DLEU1-DLEU7
+chr13	50433550	50433551	-	chr13	50757762	50757763	+	DLEU1-DLEU7
+chr13	33130289	33130290	-	chr13	33350289	33350290	+	STARD13-STARD13
+chr13	33142373	33142374	-	chr13	33350289	33350290	+	STARD13-STARD13
+chr13	33167622	33167623	-	chr13	33439690	33439691	+	STARD13-STARD13
+chr3	77098340	77098341	-	chr3	77340431	77340432	+	
+chr3	61748982	61748983	-	chr3	61989624	61989625	+	PTPRG-PTPRG
+chr3	61562372	61562373	-	chr3	61989624	61989625	+	PTPRG-PTPRG
+chr3	23217312	23217313	-	chr3	23449857	23449858	+	UBE2E2-UBE2E2
+chr3	195687747	195689439	-	chr3	195959108	195960499	-
+chr3	195689773	195691177	-	chr3	195956590	195958606	-
+chr3	195655296	195691112	+	chr3	195957571	197630765	+
+chr7	9760063	9760064	-	chr7	10085275	10085276	+	new	gene
+chr7	9822041	9822042	-	chr7	10085275	10085276	+	new	gene
+chr7	9866917	9866918	-	chr7	10085275	10085276	+	new	gene
+chr7	93591771	93591772	-	chr7	93807203	93807204	+	new	gene
+chr7	89423248	89423249	-	chr7	89694320	89694321	+	
+chr7	7673322	7673454	-	chr7	7877280	7877400	+
+chr7	42023467	42023468	+	chr7	42223295	42223296	-	GLI3 large cicular
+chr7	42040037	42040038	+	chr7	42223295	42223296	-	GLI3 large cicular
+chr7	42076751	42076752	+	chr7	42223295	42223296	-	GLI3 large cicular
+chr7	40509545	40509546	-	chr7	40749433	40749434	+	
+chr7	29146960	29146961	-	chr7	29354624	29354625	+	
+chr7	156724111	156724112	+	chr7	156826744	156826745	-	
+chr7	111989160	111989190	-	chr7	112206101	112206102	+	DOCK4-DOCK4
+chr7	112004131	112004132	-	chr7	112205372	112205373	+	DOCK4-DOCK4
+chr7	112004131	112004132	-	chr7	112206101	112206102	+	DOCK4-DOCK4
+chr7	109841570	109841571	-	chr7	110120090	110120091	+	new gene
+chr7	109841570	109841571	-	chr7	110180977	110180978	+	new gene
+chr7	109841570	109841571	-	chr7	110290306	110290307	+	new gene
+chr7	109841570	109841571	-	chr7	110394550	110394551	+	new gene
+chr7	109841570	109841571	-	chr7	110432810	110432811	+	new gene
+chr8	95268890	95268891	-	chr8	95610663	95610664	+	readthrough
+chr8	114648437	114648438	-	chr8	114902464	114902465	+	new gene
+chr8	114648437	114648438	-	chr8	114986615	114986616	+	new gene
+chr8	114648437	114648438	-	chr8	114996319	114996320	+	new gene
+chr8	101543240	101543241	+	chr8	101649499	101649500	-	GRHL2 large circular
+chr9	63823240	63823796	-	chr9_KI270718v1_random	37432	37967	-
+chr9	63823240	63823796	+	chr9_KI270718v1_random	37432	37967	+
+chr9	62798904	62798929	+	chr9	63816726	63816848	+
+chr9	137716625	137716626	+	chr9	137818138	137818139	-	
+chr9	13553324	13553325	-	chr9	13835797	13835798	+	
+chr10	8669801	8669802	-	chr10	9065362	9065363	+	
+chr10	77404023	77404024	-	chr10	77710505	77710506	+	KCNMA1 new exon
+chr10	77493929	77493930	-	chr10	77710505	77710506	+	kCNMA1 new exon
+chr10	74151250	74151310	-	chr10	74394145	74394175	+	ADK-ADK	(1)
+chr10	74176850	74176890	-	chr10	74394135	74394240	+	ADK-ADK (2)
+chr10	51153180	51153335	-	chr10	51804580	51804680	+	PRKG1-PRKG1
+chr10	24219734	24219910	-	chr10	24432994	24433024	+	KIAA1217-KIAA1217
+chr10	24219695	24219910	-	chr10	24473226	24473227	+
+chr10	129467285	129467297	-	chr10	129707894	129707895	+	MGMT-MGMT
+chr10	129536255	129536378	-	chr10	129759201	129759258	+	MGMT-MGMT
+chr10	129536255	129536378	-	chr10	129766785	129766788	+	MGMT-MGMT
+chr10	8669801	8669802	-	chr10	9065362	9065363	+	
+chr10	77404023	77404024	-	chr10	77710505	77710506	+
+chr10	74151265	74151306	-	chr10	74394141	74394232	+	ADK-ADK
+chr10	74176855	74176887	-	chr10	74394141	74394232	+	ADK-ADK
+chr10	51153191	51153331	-	chr10	51804584	51804671	+	PRKG1-PRKG1
+chr1	71934907	71935336	-	chr1	72282317	72282431	+	NERG1-NERG1
+chr1	75396621	75396622	-	chr1	75615852	75615853	+
+chr1	75339630	75339631	-	chr1	75615852	75615853	+
+chr1	197595207	197595208	+	chr1	197715074	197715075	-	
+chr1	197583151	197583152	+	chr1	197772932	197772933	-	
+chr1	197583151	197583152	+	chr1	197715074	197715075	-	
+chr1	164563311	164563312	-	chr1	164792493	164792494	+	
+chr1	162070282	162070283	-	chr1	162287343	162287344	+	
+chr2	78025424	78025425	-	chr2	78485793	78485794	+	
+chr2	61473618	61473619	-	chr2	61476320	61476321	-	
+chr2	41166555	41166556	-	chr2	41418927	41418928	+	
+chr2	26057640	26057641	-	chr2	151431799	151431800	-	
+chr2	19644860	19644861	-	chr2	19901705	19901706	+	
+chr2	19661586	19661587	-	chr2	19901705	19901706	+	
+chr2	155809927	155809928	+	chr2	155914227	155914228	-	
+chr2	133213779	133213780	-	chr2	133517457	133517458	+	
+chr2	10684612	10684613	-	chr2	10686964	10686965	-	NOL10-NOL10
+chr3	192360538	192360539	-	chr3	192644265	192644266	+	FGF12-FGF12
+chr3	17508601	17508606	-	chr3	17742480	17742481	+	TBC1D5-TBC1D5
+chr3	17508255	17508436	-	chr3	17742491	17742534	+	TBC1D5-TBC1D5
+chr3	17508473	17508474	+	chr3	17623913	17623914	-	TBC1D5-TBC1D5
+chr3	17508486	17508541	-	chr3	17742485	17742527	+	TBC1D5-TBC1D5
+chr3	172112451	172112509	+	chr3	172226891	172226948	-
+chr3	111232985	111239233	-	chr3	111496887	111496962	+
+chr4	91279163	91279164	-	chr4	91598571	91598572	+
+chr4	86194407	86194408	-	chr4	86453029	86453030	+	
+chr4	52920490	52920871	-	chr4	53145332	53145381	+
+chr4	40233406	40233407	+	chr4	40235440	40235441	+	
+chr4	157677333	157677334	-	chr4	157929611	157929612	+	
+chr17	9250501	9250646	-	chr17	9491828	9491846	+
+chr17	9250501	9250646	-	chr17	9505047	9505103	+
+chr17	9250501	9250646	-	chr17	9545169	9545263	+
+chr17	72736719	72736720	-	chr17	72947751	72947752	+	
+chr17	72736719	72736720	-	chr17	72947730	72947731	+	
+chr17	57262192	57262193	-	chr17	57529675	57529676	+	MSI2-MSI2
+chr17	46231901	46231902	+	chr17	46277010	46277011	+	
+chr17	46152903	46152904	+	chr17	46247425	46247426	+	
+chr17	46152903	46152904	+	chr17	46248084	46248085	+	
+chr17	45598501	45598502	-	chr17	46152903	46152904	+	
+chr14	78243802	78243803	-	chr14	78645119	78645120	+	NRXN3-NRXN3
+chr14	66703613	66703614	-	chr14	66705277	66705278	-	
+chr14	66703616	66703617	+	chr14	66704988	66704989	+	
+chr14	44597013	44597014	-	chr14	44797929	44797930	+	
+chr15	82388649	82388659	+	chr15	84373749	84373763	-	
+chr15	71141448	71141449	+	chr15	71256715	71256716	-	
+chr15	39071608	39071609	-	chr15	39587320	39587321	+	
+chr15	9250548	9250646	-	chr15	9491828	9491846	+
+chr15	9250550	9250603	-	chr15	9505047	9505103	+
+chr15	9250501	9250603	-	chr15	9545169	9545263	+
+chr17	72736719	72736720	-	chr17	72947730	72947731	+	
+chr17	72736719	72736720	-	chr17	72947751	72947752	+	
+chr17	68306943	68306944	+	chr17	68420507	68420508	-	ARSG large circular
+chr17	46231901	46231902	+	chr17	46277010	46277011	+	
+chr17	46152903	46152904	+	chr17	46247425	46247426	+	
+chr17	46152903	46152904	+	chr17	46248084	46248085	+	
+chr17	45598501	45598502	-	chr17	46152903	46152904	+	
+chr17	45597838	45597839	-	chr17	46152903	46152904	+	
+chr17	45578419	45578420	+	chr17	46289344	46289345	-	
+chr18	7567891	7567892	-	chr18	7888105	7888106	+	
+chr18	44701174	44701175	+	chr18	44803099	44803100	-	
+chr18	39535615	39535616	-	chr18	39800068	39800069	+	
+chr18	34493514	34493515	-	chr18	34755975	34755976	+	
+chr19	684258	684259	-	chr19	57305536	57305537	-
+chr19	57851543	57851984	-	chr19	57914908	57914919	-
+chr19	57852149	57852405	-	chr19	57914830	57914898	-
+chr19	57852149	57852405	+	chr19	57914830	57914898	+
+chr19	23379815	23379848	-	chr19	23799177	23799607	-
+chr19	23379735	23379766	+	chr19	23799721	23799887	+
+chr20	42885593	42885933	-	chr20	43189642	43189815	+	PTPRT-PTPRT
+chr20	42885593	42885933	-	chr20	43123761	43123762	+	PTPRT-PTPRT
+chr20	42472297	42472570	-	chr20	42677863	42677941	+	PTPRT-PTPRT
+chr20	14695864	14695865	-	chr20	15229939	15229940	+	
+chr21	8213880	8213886	+	chr21	8441312	8441314	-	
+chr21	35580929	35580930	-	chr21	35814950	35814951	+	
+chr21	35580929	35580930	-	chr21	35864284	35864285	+	
+chr21	28577380	28577381	-	chr21	28821904	28821905	+	
+chr21	17917400	17917401	-	chr21	18199877	18199878	+	CHODL-CHODL
+chr21	17917400	17917401	-	chr21	18224515	18224516	+	CHODL-CHODL
+chr21	17917787	17917788	-	chr21	18256508	18256509	+	CHODL-CHODL
+chr22	47687206	47687207	-	chr22	48013740	48013741	+	
+chrX	94303122	94303123	-	chrX	94529409	94529410	+	new gene
+chrX	94326894	94326895	-	chrX	94529409	94529410	+	new gene
+chrX	94193575	94193576	-	chrX	94529409	94529410	+	new gene
+chrX	68081700	68081701	+	chrX	68194498	68194499	-	OPHN1 large circular (1)
+chrX	68081700	68081701	+	chrX	68299096	68299097	-	OPHN1 large circular (2)
+chrX	68096869	68096870	+	chrX	68201710	68201711	-	OPHN1 large circular (3)
+chrX	68096869	68096870	+	chrX	68299096	68299097	-	OPHN1 large circular (4)
+chrX	132218837	132218838	-	chrX	132429812	132429813	+
+chrX	129200769	129200770	-	chrX	129448332	129448333	+	
+chrX	129180053	129180054	-	chrX	129448332	129448333	+	
+chr1	78643143	78643144	+	chr1	78838564	78838565	-	new	circular
+chr1	789460	789510	+	chr1	224014210	224014520	-
+chr1	78643143	78643144	+	chr1	78838564	78838565	-	
+chr1	61088265	61088690	-	chr1	61332524	61332946	+
+chr1	61088265	61088690	-	chr1	61352449	61352466	+
+chr1	58277672	58277673	-	chr1	58506059	58506060	+	
+chr1	58253806	58253807	+	chr1	58539310	58539311	-	
+chr1	49245801	49245860	-	chr1	49851407	49851478	+
+chr1	239678288	239678289	-	chr1	239907432	239907433	+	CHRM3-CHRM3
+chr1	216677491	216677492	-	chr1	216905564	216905565	+
+chr1	216677491	216677492	-	chr1	217078135	217078136	+
+chr1	215086367	215086368	+	chr1	215195092	215195093	-	
+chr1	197595207	197595208	+	chr1	197715074	197715075	-	
+chr1	170807604	170807605	-	chr1	171168103	171168104	+	
+chr1	164563311	164563312	-	chr1	164792493	164792494	+	
+chr1	164560013	164560014	-	chr1	164792493	164792494	+	
+chr1	162070282	162070283	-	chr1	162287343	162287344	+	
+chr1	145574819	145574843	+	chr1	146074394	146074412	-	
+chr1	13893756	13893757	-	chr1	14180434	14180435	+	
+chr5	34182832	34182870	-	chr5	69916099	69916219	-	
+chr5	23977922	23977923	-	chr5	24200195	24200196	+	
+chr5	15192449	15192450	-	chr5	15425574	15425575	+	
+chr5	130462386	130462387	-	chr5	130677594	130677595	+	
+chr5	107427238	107427510	-	chr5	107670287	107670601	+	
+chr5	107084708	107084709	-	chr5	107285893	107285894	+	
+chr6	81845909	81845910	-	chr6	82057938	82057939	+	
+chr6	74636631	74636632	-	chr6	74841949	74841950	+	new gene
+chr6	74636631	74636632	-	chr6	74944955	74944956	+	new gene
+chr6	74636631	74636632	-	chr6	75075943	75075944	+	new gene
+chr6	74842040	74842041	-	chr6	75075943	75075944	+	new gene
+chr6	30261479	30261637	-	chr6	31269043	31270086	-	HLA-C
+chr6	29945450	29945451	+	chr6	31382240	31382241	+	
+chr6	29944138	29944139	-	chr6	31355575	31355576	-	
+chr6	15246180	15246585	-	chr6	15452005	15452044	+	
+chr7	118860012	118860013	-	chr7	119165377	119165378	+	
+chr8	47279269	47279270	+	chr8	47440542	47440543	-	SPIDR large circular
+chr8	47279269	47279270	+	chr8	47599196	47599197	-	SPIDR large circular
+chr8	47279861	47279862	+	chr8	47396626	47396627	-	SPIDR large circular
+chr8	47279861	47279862	+	chr8	47440542	47440543	-	SPIDR large circular
+chr8	47279861	47279862	+	chr8	47491994	47491995	-	SPIDR large circular
+chr8	18121057	18121058	-	chr8	18343776	18343777	+	NAT1 new splice variant
+chr8	18121057	18121058	-	chr8	18380317	18380318	+	NAT1 new splice variant
+chr8	18174093	18174094	-	chr8	18380317	18380318	+	NAT1 new splice variant
+chr8	117830349	117830350	-	chr8	118110084	118110085	+	EXT1-EXT1
+chr8	117835461	117835555	-	chr8	118110084	118110153	+	EXT1-EXT1
+chr8	117835461	117835555	-	chr8	118110128	118110135	+	EXT1-EXT1
+chr8	117837119	117837202	-	chr8	118060730	118060731	+	EXT1-EXT1
+chr8	117837119	117837202	-	chr8	118110084	118110085	+	EXT1-EXT1
+chr8	117837119	117837202	-	chr8	118110103	118110104	+	EXT1-EXT1
+chr8	115418452	115418453	-	chr8	115619131	115619132	+	TRPS1-TRPS1
+chr8	115418452	115418453	-	chr8	115668544	115668545	+	TRPS1-TRPS1
+chr9	37126311	37126312	+	chr9	37304313	37304315	-	ZCCHC7 large circular
+chr9	14146688	14146689	+	chr9	14307520	14307521	-	NFIB large circular
+chr9	14179726	14179727	+	chr9	14307520	14307521	-	NFIB large circular
+chr9	13553324	13553325	-	chr9	13836312	13836313	+	
+chr4	9601619	9601620	+	chr14	55024545	55024546	+	adenoma	
+chr4	9601620	9601621	-	chr6	88382555	88382556	-	adenoma	
+chr4	10871074	10871075	-	chr4	11120762	11120764	+	adenoma	specfic	readthrough?
+chr4	10871074	10871075	-	chr4	11161762	11161763	+	adenoma	specfic	readthrough?
+chr8	100920440	100920441	+	chrX	64612387	64612388	-	
+chr6	147509387	147509388	-	chr6	148390133	148390134	+	SASH1-SASH1
+chr6	106971247	106971248	-	chr15	56072681	56072682	+	
+chr1	206929270	206929271	-	chr19	41730132	 41730133	-	
+chr1	206696115	206696116	+	chr5	150446958	150446959	-	
+chr11	43855896	43855897	+	chr11	84506381	84506382	-	
+chr16	89563066	89563067	-	chr19	56217175	56217176	-	
+chr2	231713104	231713110	-	chr17	76651452	76651455	-	
+chr2	231713109	231713110	-	chr14	92027083	92027084	+	
+chr16	89561280	89561281	+	chr17	17383854	17383855	+	
+chr16	35174381	35174382	-	chr22	19175890	19175891	-	
+chr12	110294836	110294838	-	chr16	89563066	89563067	-	
+chr12	16400460	16400461	+	chr14	21360933	21360934	-	
+chr10	78037262	78037263	-	chr11	33237307	33237308	+	
+chr9	131414409	131414410	+	chr12	113871823	113871824	+	
+chr7	126904570	126904684	-	chr7	127106494	127106508	+	GRM8-GRM8
+chr6	31356202	31356861	-	chr6_GL000254v2_alt	2611923	2698866	+	HLA-B-HLA-B
+chr5	61390792	61390793	-	chr22	39313201	39313202	+	
+chr5	59382411	59382412	-	chr5	59586328	59586329	+	PDE4D new exon
+chr5	176560933	176560934	-	chr11_KI270927v1_alt	150312	150313	-	
+chr5	147922876	147922877	+	chr11	62566880	62566914	+	
+chr4	9601620	9601621	-	chr7	125221169	125221170	+	
+chr4	154812716	154812717	-	chr12	106348974	106348975	-	
+chr4	117574873	117574874	-	chr7	33014505	33014506	+	
+chr4	108622605	108622606	-	chr13	24988762	24988763	-	
+chr3	40462025	40462047	+	chr12	62965801	62965802	-	
+chr3	142827454	142827455	-	chr8	144791298	144791299	+	
+chr1	13843040	13843108	-	chr1	14180433	14180435	+	
+chr1	14180592	14180593	-	chr1	14496667	14496668	+	KAZN splice variant
+chr1	14180592	14180593	-	chr1	14598982	14598983	+	KAZN splice variant
+chr2	212124903	212124904	-	chr2	212538448	212538449	+	ERBB4-ERBB4
+chr2	212124903	212124904	-	chr2	212537520	212537521	+	ERBB4-ERBB4
+chr2	212124903	212124904	-	chr2	212445329	212445330	+	ERBB4-ERBB4
+chr2	211947429	211947430	+	chr2	212124903	212124904	-	ERBB4 large circular
+chr2	212395910	212396030	+	chr3	63905474	63905475	-	
+chr14	105587550	106538250	-	chr14	105707555	106874785	+	IGH chains
+chr14	105587550	106538250	+	chr14	105707555	106874785	-	IGH chains
+chr14	105600000	106800000	-	chr14_KI270726v1_random	0	50000	-
+chr14	105600000	106800000	+	chr14_KI270726v1_random	0	50000	+
+chr15	21142484	21143415	-	chr22	22285529	22286389	+	IGL duplicate
+chr15	21142475	21143430	+	chr22	22285515	22286400	-	IGL duplicate
+chr22	22100000	23000000	+	chr22_KI270875v1_alt	0	300000	-
+chr22	22100000	23000000	-	chr22_KI270875v1_alt	0	300000	+
+chr2	131571350	131571725	-	chr14	18948624	18948750	+	multi-map artefact	
+chr2	131571350	131571725	+	chr14	18948624	18948750	-	multi-map artefact
+chr2	131571325	131571500	-	chr18	54225925	54225975	+	multi-map artefact
+chr2	130026100	130931000	-	chr2	131284800	131634000	-	POTEI modifications?
+chr2	130026100	130931000	-	chr2	131284800	131634000	+	POTEI modifications?
+chr2	130026100	130931000	+	chr2	131284800	131634000	-	POTEI modifications?
+chr2	130026100	130931000	+	chr2	131284800	131634000	+	POTEI modifications?
+chr10	76029004	76029030	-	chr14	74199770	74200250	-
+chr10	76058783	76058784	-	chr10	76324400	76324401	+	LRMDA-LRMDA
+chr3	174737652	174737747	-	chr3	175096789	175097064	+	NAALADL2-NAALADL2 alternative transcript
+chr3	175096789	175096790	+	chr3	175234204	175234205	-	NAALADL2 larce circular
+chr3	175262599	175262600	+	chr9	70394298	70394299	+	
+chr3	174737656	174737685	-	chr3	175096893	175097064	+	
+chr3	175233958	175234207	-	chr3	175447225	175447244	+	
+chr11	70896500	70896501	+	chr11	71119032	71119033	-	SHANK2-SHANK2 large circular
+chr11	70502931	70502932	-	chr11	71224696	71224697	+	SHANK2-SHANK2
+chr2	202201031	202201342	+	chr12	51242498	51242859	+	
+chr6	151880675	151880772	-	chr6	152094384	152094413	+	ESR1-ESR1
+chr6	151957070	151957071	+	chrX	47383194	47383195	+	
+chr6	132771830	132771850	+	chr6	151851800	151851920	+	
+chr6	151807842	151807843	+	chr6	151944395	151944509	-	ESR1 large circular
+chr6	151807842	151807843	+	chr6	152011794	152011795	-	ESR1 large circular
+chr1	174256603	174256604	+	chr6	152035755	152036005	-
+chr6	151842620	151842788	-	chr6	152060990	152094385	+	ESR1-ESR1
+chr6	151842596	151842597	+	chr6	151944508	151944509	-	ESR1 large circular
+chr11	62665430	62665434	+	chr19	893592	893596	-	
+chr7	126477644	126477645	-	chr18	79969403	79969404	+
+chr19	11132215	11132735	+	chr1	83242618	83242731	-
+chr19	11132215	11132735	-	chr1	83242618	83242731	+
+chr19	11132215	11132735	-	chr12	128745500	128745515	+
+chr19	11132215	11132735	-	chr13	19813095	19813115	-
+chr19	11132215	11132735	-	chr15	100850380	100850395	-
+chr19	11132215	11132735	-	chr7	112857310	112857320	-
+chr19	11132215	11132735	-	chr9	89966710	89966720	+
+chr1	181718603	181718604	+	chr7	103099601	103099602	+
+chr3	94505960	94506210	+	chr7	103099150	103099500	+
+chr3	49403987	49404094	-	chr7	136107450	136107454	+
+chr3	49404094	49404095	+	chr12	85726526	85726527	+
+chr14	21643470	22272570	-	chr14	22462910	22551660	+	TRA homologue
+chr2	218467950	218468040	-	chr6	52501100	52501990	+
+chr2	218467950	218468040	+	chr6	52501100	52501990	-
+chr8	140023904	140024075	-	chr8	140252776	140252905	+	TRAPPC9-TRAPPC9
+chr8	139988674	139988836	-	chr8	140221458	140221491	+	TRAPPC9-TRAPPC9
+chr8	139988674	139988836	-	chr8	140252776	140252905	+	TRAPPC9-TRAPPC9
+chr5	21278006	21278007	-	chr8	115516268	115516269	-	
+chr2	76445370	76445405	-	chr11	65499365	65499700	-
+chr1	28508570	28508765	+	chr11	65500895	65505630	-
+chr1	28508570	28508765	+	chr11	65500895	65505630	+
+chr10	37305780	37428290	-	chr11	65499735	65501190	+
+chr11	62841645	62841810	-	chr11	65499929	65506024	-
+chr11	62841645	62841810	+	chr11	65499929	65506024	+
+chr2	76445353	76445421	-	chr11	65499360	65506029	-
+chr7	94427791	94428328	+	chr11	65503400	65503524	-
+chr9	35657810	35658023	-	chr11	65500126	65503315	-
+chr9	35657810	35658023	+	chr11	65500126	65503315	+
+chr11	65499391	65505983	-	chr12	112267093	112267187	+
+chr11	65489914	65511918	-	chr22_KI270733v1_random	112743	184987	+
+chr6	24683749	24683921	+	chr22	32532141	32533816	-
+chr2	211701966	211701967	+	chr2	211947616	211947617	-	ERBB4 large circular
+chr2	211788024	211788025	+	chr2	211947616	211947617	-	ERBB4 large circular
+chr2	211629820	211630135	+	chr9	72153014	72153071	+
+chr10	35955324	35959930	+	chr10	37395190	37401967	-	
+chr10	35955324	35959930	-	chr10	37395190	37401967	+	
+chr10	37396696	37396860	-	chr20	22296859	22296935	+	
+chr2	135498429	135498440	-	chr10	37412669	37413205	-	
+chr2	235494685	235494859	-	chr2	236049048	236049069	+	AGAP1-AGAP1
+chr2	235494685	235494859	-	chr2	235709168	235709232	+	AGAP1-AGAP1
+chr2	235499588	235499609	-	chr2	235709168	235709232	+	AGAP1-AGAP1
+chr2	235505624	235505645	-	chr2	235709168	235709232	+	AGAP1-AGAP1
+chr2	235494685	235494859	-	chr2	235717545	235717618	+	AGAP1-AGAP1
+chr2	235494685	235494859	-	chr2	235740947	235740973	+	AGAP1-AGAP1
+chr2	235494685	235494859	-	chr2	235744685	235744734	+	AGAP1-AGAP1
+chr4	122076228	122076316	-	chr22	31205902	31206160	-	
+chr8	115498189	115500098	-	chr11	58179047	58179099	-	
+chr8	115497954	115498298	-	chr13	42026451	42026483	-	
+chr8	115524538	115524730	+	chr22	42712708	42712752	+	
+chr8	115409249	1154092760	+	chr15	60870437	60870458	-	
+chr14	103341880	103341901	+	chr20	34200704	34200725	-
+chr1	228256302	228256306	-	chr22	22900970	22900980	+	
+chr1	228256302	228256306	-	chr22	22906340	22906345	+	
+chr7	44328174	44328175	+	chr22	22906340	22906345	+	
+chr7	44328174	44328175	+	chr22	22900970	22900980	+	
+chr8	124144855	124144870	+	chr22	22900970	22900980	+	
+chr3	195690630	195690640	+	chr5	265415	265426	-	
+chr3	195692603	195693038	-	chr5	267850	267901	+	
+chr3	195693137	195693462	+	chr5	267915	267993	-	
+chr17	46291135	46291195	+	chr17	64923595	64923615	+	
+chr17	46135404	46135415	+	chr17	64922331	64922343	+
+chr17	45613606	45613749	-	chr17	46277000	46277049	+	possibly new transcript
+chr19	17582186	17582324	+	chr20	35505413	35505437	+	
+chr19	17581773	17582043	-	chr20	35505488	35505512	-	
+chr3	167786343	167786364	-	chr19	17581690	17582056	-	
+chr10	27486902	27486955	-	chr12	11104506	11104548	-	
+chr12	11042794	11042837	-	chr12	15212296	15212390	+	
+chr3	63018769	63018822	-	chr12	11038761	11038877	+	
+chr8	122656818	122656841	-	chr12	11099626	11099709	+	
+chr3	171562605	171562606	+	chr15	64951304	64951305	-	
+chr3	171562624	171562625	-	chr15	64951299	64951300	+	
+chr2	99672589	99672590	-	chr2	100006630	100006768	+	AFF3-AFF3
+chr2	99727076	99727112	-	chr2	100006630	100006768	+	AFF3-AFF3
+chr2	99744103	99744132	-	chr2	100006631	100006688	+	AFF3-AFF3
+chr2	99752241	99752302	-	chr2	100006631	100006688	+	AFF3-AFF3
+chr2	99727076	99727077	+	chr2	100008932	100008933	-	AFF3 large circular
+chr2	99837476	99837477	+	chr2	100008932	100008933	-	AFF3 large cicular
+chr2	99649625	99649626	+	chr2	100008932	100008933	-	AFF3 large cicular
+chr2	99649625	99649626	+	chr2	100011571	100011572	-	AFF3 large cicular
+chr19	54353981	54354292	+	chr22	34958203	34958231	-	
+chr19	54353982	54354111	+	chr19	58458965	58458977	-	
+chr7	141780031	141780042	+	chr19	54354020	54354139	+	PLXDC2-PLXDC2
+chr10	19817053	19817192	-	chr10	20046868	20046879	+	PLXDC2-PLXDC2
+chr10	19817053	19817192	-	chr10	20068167	20068199	+	PLXDC2-PLXDC2
+chr10	19817191	19817192	-	chr10	20143294	20143295	+	PLXDC2-PLXDC2
+chr10	20001774	20001775	+	chr10	20245505	20245506	-	PLXDC2 large circular
+chr10	20143294	20143295	+	chr10	20245505	20245506	-	PLXDC2 large circular
+chr7	110663321	110663723	-	chr7	110886592	110886620	+	IMMP2L-IMMP2L
+chr7	110663450	110963566	-	chr7	111329393	111329394	+	IMMP2L new exon
+chr7	110663450	110963566	-	chr7	111392801	111392802	+	IMMP2L new exon
+chr7	110663450	110963566	-	chr7	111413944	111413945	+	IMMP2L new exon
+chr7	110886695	110886696	-	chr7	111487237	111487238	+	IMMP2L-IMMP2L
+chr7	110663702	110663721	-	chr7	111487237	111487278	+	IMMP2L-IMMP2L
+chr7	110886603	110886695	-	chr7	111487237	111487278	+	IMMP2L-IMMP2L
+chr7	110886603	110886695	-	chr7	111487237	111487250	+	IMMP2L-IMMP2L
+chr7	110663450	110963566	-	chr7	111487237	111487250	+	IMMP2L-IMMP2L
+chr7	110964851	110964852	-	chr7	111487237	111487250	+	IMMP2L-IMMP2L
+chr7	111080215	111080216	-	chr7	111487237	111487250	+	IMMP2L-IMMP2L
+chr7	111235468	111235469	-	chr7	111487237	111487250	+	IMMP2L-IMMP2L
+chr7	111275153	111275154	-	chr7	111487237	111487250	+	IMMP2L-IMMP2L
+chr7	110663450	110963566	-	chr7	111521312	111521348	+	IMMP2L-IMMP2L
+chr7	110886603	110886695	-	chr7	111521312	111521348	+	IMMP2L-IMMP2L
+chr7	110663450	110963566	-	chr7	111561850	111561861	+	IMMP2L-IMMP2L
+chr7	111275153	111275154	-	chr7	111561850	111561861	+	IMMP2L-IMMP2L
+chr7	111417258	111417259	+	chr7	111561923	111561924	-	IMMP2L large circular
+chr3	59536997	59536998	-	chr3	59809731	59809732	+	FHIT-FHIT
+chr3	59752302	59752322	-	chr3	60011370	60011371	+	FHIT-FHIT
+chr3	59752302	59752322	-	chr3	60014006	60014007	+	FHIT-FHIT
+chr3	60014031	60014265	-	chr3	60277452	60277470	+	FHIT-FHIT
+chr3	59922373	59922403	-	chr3	60277452	60277470	+	FHIT-FHIT
+chr3	60014031	60014265	-	chr3	60536756	60536980	+	FHIT-FHIT
+chr3	60014031	60014265	-	chr3	60821918	60821938	+	FHIT-FHIT
+chr3	60014031	60014265	-	chr3	60277452	60277483	+	FHIT-FHIT
+chr3	60014031	60014265	-	chr3	61042043	61042077	+	FHIT-FHIT
+chr3	60822011	60822012	-	chr3	61042046	61042047	+	FHIT-FHIT
+chr3	60822011	60822012	-	chr3	61200616	61200617	+	FHIT-FHIT
+chr3	60536792	60536980	-	chr3	61042043	61042077	+	FHIT-FHIT
+chr3	60536792	60536980	-	chr3	60821918	60821938	+	FHIT-FHIT
+chr3	60536792	60536980	-	chr3	61200616	61200617	+	FHIT-FHIT
+chr3	60536792	60536980	-	chr3	61251300	61251381	+	FHIT-FHIT
+chr3	61041770	61042115	-	chr3	61251300	61251381	+	FHIT-FHIT
+chr1	245764149	245764150	-	chr1	246327200	246327276	+	SMYD3-SMYD3
+chr1	245863812	245863887	-	chr1	246327200	246327276	+	SMYD3-SMYD3
+chr1	245915640	245915641	-	chr1	246327200	246327276	+	SMYD3-SMYD3
+chr1	245928000	245928036	-	chr1	246327200	246327276	+	SMYD3-SMYD3
+chr1	245929887	245929938	-	chr1	246327200	246327276	+	SMYD3-SMYD3
+chr1	245929887	245929938	-	chr1	246507051	246507125	+	SMYD3-SMYD3
+chr1	245929887	245929938	-	chr1	246146855	246146890	+	SMYD3-SMYD3
+chr1	245928000	245928036	-	chr1	246186740	246186790	+	SMYD3-SMYD3
+chr1	245858495	245858496	+	chr1	246186922	246186963	-	SMYD3 large circular
+chr10	12349750	12349911	-	chr10	12553220	12553284	+	CAMK1D-CAMK1D
+chr10	12553240	12553357	-	chr10	12760940	12760989	+	CAMK1D-CAMK1D
+chr1	211941555	211941702	+	chr22	40132769	40132793	+	
+chr7	128478364	128502809	+	chr17	62422980	62449629	-	METTL2A-METTL2B
+chr1	16620400	16628001	-	chr1	16946500	16949601	-	CROCCP2-CROCC
+chr1	16620400	16628001	+	chr1	16946500	16949601	+	CROCCP2-CROCC
+chr8	139988765	139988837	-	chr8	140221458	140221512	+	TRAPPC9-TRAPPC9
+chr8	140024033	140024081	-	chr8	140252775	140252925	+	TRAPPC9-TRAPPC9
+chr7	69899390	69899499	-	chr7	70118131	70118152	+	AUTS2-AUTS2
+chr7	69899390	69899499	-	chr7	70134535	70134764	+	AUTS2-AUTS2
+chr7	69899390	69899499	-	chr7	70435751	70435752	+	AUTS2-AUTS2
+chr7	69899390	69899499	-	chr7	70698568	70698595	+	AUTS2-AUTS2
+chr7	69899390	69899499	-	chr7	70762868	70762897	+	AUTS2-AUTS2
+chr7	69599962	69599963	-	chr7	69816399	69816400	+	AUTS2-AUTS2
+chr7	69599962	69599963	-	chr7	69825779	69825780	+	AUTS2-AUTS2
+chr7	69599962	69599963	-	chr7	69899289	69899290	+	AUTS2-AUTS2
+chr7	69599962	69599963	-	chr7	70118131	70118132	+	AUTS2-AUTS2
+chr7	70134571	70134572	-	chr7	70435751	70435752	+	AUTS2-AUTS2
+chr7	70134571	70134572	-	chr7	70698568	70698569	+	AUTS2-AUTS2
+chr7	70435781	70435782	-	chr7	70698568	70698569	+	AUTS2-AUTS2
+chr10	5639724	5639725	+	chrX	31863019	31863020	+	
+chrX	31134194	31134195	-	chrX	31627672	31627673	+	DMD->DMD
+chrX	31147518	31147519	-	chrX	31929595	31929596	+	DMD->DMD
+chrX	31209699	31209700	-	chrX	31627672	31627673	+	DMD->DMD
+chrX	31223121	31223122	-	chrX	32155370	32155376	+	DMD->DMD
+chrX	31323658	31323659	-	chrX	32155370	32155376	+	DMD->DMD
+chrX	31479103	31479104	-	chrX	31729630	31729631	+	DMD->DMD
+chrX	31679586	31679587	-	chrX	32216915	32216916	+	DMD->DMD
+chrX	31875201	31875375	-	chrX	32216915	32216916	+	DMD->DMD
+chrX	31932227	31932228	-	chrX	32155370	32155376	+	DMD->DMD
+chrX	32216915	32216916	+	chrX	32348529	32348530	-	DMD large circular
+chrX	32849740	32849821	-	chrX	33211281	33211296	+	DMD->DMD
+chrX	32849740	32849821	-	chrX	33211281	33211296	+	DMD->DMD
+chrX	32849740	32849821	-	chrX	33211281	33211296	+	DMD->DMD
+chrX	32849740	32849821	-	chrX	33211281	33211296	+	DMD->DMD
+chrX	32849740	32849821	-	chrX	33211281	33211296	+	DMD->DMD
+chrX	33078347	33078348	-	chrX	33339258	33339259	+	DMD->DMD
+chr19	54353691	54354312	+	chr22	34958203	34958231	-	
+chr17	34039134	34039315	-	chr17	62565092	62565134	-	TLK2-TLK2P1
+chr8	118379530	118379702	-	chr8	118580713	118580800	+	SAMD12-SAMD12
+chr8	118197722	118197736	-	chr8	118439828	118439842	+	SAMD12-SAMD12
+chr8	118379690	118379704	-	chr8	118621800	118621814	+	SAMD12-SAMD12
+chr8	118197650	118197734	-	chr8	118439830	118439890	+	SAMD12-SAMD12
+chr8	118379430	118379702	-	chr8	118621800	118621880	+	SAMD12-SAMD12
+chr8	118197530	118197735	-	chr8	118580713	118580800	+	SAMD12-SAMD12
+chr2	141254546	141254644	-	chr2	142130642	142130794	+	LRP1B-LRP1B
+chr2	141254546	141254644	-	chr2	141480395	141480491	+	LRP1B-LRP1B
+chr2	141254546	141254644	-	chr2	141810278	141810284	+	LRP1B-LRP1B
+chr2	141429783	141429805	-	chr2	141810278	141810284	+	LRP1B-LRP1B
+chr2	141480400	141480536	-	chr2	142130642	142130800	+	LRP1B-LRP1B
+chr2	141480400	141480536	-	chr2	141810278	141810284	+	LRP1B-LRP1B
+chr2	141502854	141502855	-	chr2	141810278	141810284	+	LRP1B-LRP1B
+chr2	141546577	141546578	-	chr2	141810278	141810284	+	LRP1B-LRP1B
+chr2	141549987	141549988	-	chr2	141810278	141810284	+	LRP1B-LRP1B
+chr2	141810098	141810404	-	chr2	142130642	142130800	+	LRP1B-LRP1B
+chr2	141810098	141810404	-	chr2	142130642	142130800	+	LRP1B-LRP1B
+chr2	141810098	141810404	-	chr2	142044326	142044327	+	LRP1B-LRP1B
+chr2	141810098	141810404	-	chr2	142125269	142125270	+	LRP1B-LRP1B
+chr15	71411700	71411823	-	chr15	71627093	71627094	+	THSD4-THSD4
+chr15	71411700	71411823	-	chr15	71660527	71660661	+	THSD4-THSD4
+chr15	71242820	71243099	-	chr15	71660527	71660661	+	THSD4-THSD4
+chr15	71411700	71411780	+	chr15	71660734	71660735	-	THSD4 large circular
+chr15	71141448	71141452	+	chr15	71660734	71660735	-	THSD4 large circular
+chr15	71411686	71411690	+	chr15	71660734	71660735	-	THSD4 large circular
+chr15	71411772	71411824	-	chr15	71728547	71728561	+	THSD4-THSD4
+chr15	44701372	44701833	-	chr15	44949880	44950850	+	SETBP1-SETBP1
+chr5	59215797	59215969	-	chr5	59768251	59768391	+	PDE4D-PDE4D
+chr5	59215797	59215969	-	chr5	59586327	59586361	+	PDE4D-PDE4D
+chr5	59215797	59215969	-	chr5	59988486	59988621	+	PDE4D-PDE4D
+chr5	59215797	59215969	-	chr5	60185555	60185600	+	PDE4D-PDE4D
+chr5	59215797	59215969	-	chr5	59530326	59530327	+	PDE4D-PDE4D
+chr5	59215797	59215969	-	chr5	59430293	59430294	+	PDE4D-PDE4D
+chr5	60185687	60185688	-	chr5	60474480	60474481	+	PDE4D-PDE4D
+chr5	59038858	59038859	+	chr5	59215968	59215969	-	PDE4D large circular
+chr5	59988487	59988488	+	chr5	60185687	60185688	-	PDE4D large circular
+chr5	59988650	59988718	-	chr5	60487941	60487971	+	PDE4D-PDE4D
+chr5	59685895	59685945	-	chr5	60487941	60487971	+	PDE4D-PDE4D
+chr5	60185560	60185690	-	chr5	60487941	60487971	+	PDE4D-PDE4D
+chr12	26786453	26786454	+	chr13	52080889	52080890	-	
+chr12	26805727	26805728	+	chr12	124871515	124871516	-	
+chr12	26481130	26481131	+	chr12	26655852	26655853	-	ITPR2 large circular
+chr12	26550246	26550247	+	chr12	26655852	26655853	-	ITPR2 large circular
+chr9	63400503	63401000	+	chr22	22286044	22286472	+	
+chr9	63400503	63401000	-	chr22	22286044	22286472	-	
+chr3	150492930	150492941	+	chr18	63228520	63228535	-	
+chr3	174495670	174495700	-	chr7	157217450	157217490	-	
+chr3	175627290	175627291	+	chr3	175755418	175755419	-	NAALADL2 large circular
+chr3	175324174	175324175	+	chr3	175627386	175627387	-	NAALADL2 large circular
+chr3	174737640	174737641	+	chr3	174864090	174864091	-	NAALADL2 large circular
+chr3	174550600	174550640	-	chr3	175096788	175097080	+	NAALADL2-NAALADL2
+chr3	174859345	174859450	-	chr3	175233928	175233975	+	NAALADL2-NAALADL2
+chr3	174859345	174859450	-	chr3	175096788	175097080	+	NAALADL2-NAALADL2
+chr3	175097291	175097292	-	chr3	175324174	175324175	+	NAALADL2-NAALADL2
+chr3	175256500	175256532	-	chr3	175463400	175463430	+	NAALADL2-NAALADL2
+chr3	175471758	175471759	-	chr3	175737305	175737306	+	NAALADL2-NAALADL2
+chr3	175471758	175471759	-	chr3	175803000	175803005	+	NAALADL2-NAALADL2
+chr14	21188118	21188119	+	chr22	23391631	23391632	+	prtcl/005,019,022
+chr14	49586868	49586889	-	chr22	21723051	21723072	-	prtcl/024,008,014,022
+chr17	58805547	58805568	-	chr22	15698174	15698195	+	prtcl/026,007,042
+chr1	116740569	116740590	-	chr22	29490126	29490147	-	prtcl/007,022,025,038
+chr14	21188118	21188119	+	chr22	23391631	23391632	+	prtcl/026,005,019,022
+chr10	115215696	115215697	+	chr10	115426302	115426303	-	ATRNL1 lage circular
+chr10	13858912	13858913	-	chr10	14174011	14174012	+	FRMD4A-FRMD4A new exon
+chr10	76576148	76576149	-	chr15	82845230	82845231	+		prtcl/038,126,007
+chr10	78037187	78037228	-	chrX	3113020	3113061	-		prtcl/007,038,041,042,052
+chr1	116740559	116740600	-	chr22	29490116	29490157	-		prtcl/007,022,025,038,126,141,143
+chr1	156292378	156292439	-	chr3	110878527	110878568	+		prtcl/001,007,041
+chr11	85935622	85936014	+	chr22	19175789	19176165	+		prtcl/016,004,126
+chr12	10506275	10506296	+	chrX	24057704	24057805	-		prtcl/006,025,069
+chr12	15212281	15212302	-	chr17	49295229	49295630	+		prtcl/140,068,024,125
+chr1	23693864	23693925	-	chr5	130990066	130990107	+		prtcl/008,068,140,125,011
+chr12	53038210	53038611	-	chr16	47565354	47565415	-		prtcl/125,024,140,068
+chr12	77990102	77990123	+	chr12	77994053	77994074	+	could be population wide variant (small inversion)	prtcl/140,015,031,036
+chr13	21298315	21298336	-	chr20	25390726	25390767	-		prtcl/019,015,036
+chr13	35110968	35110989	-	chr15	20646443	20646484	-		prtcl/015,007,032,141,143
+chr13	64958696	64958737	-	chr14	92711861	92711922	+		prtcl/145,032,141,027
+chr14	103341844	103341885	-	chr20	34200654	34200715	+		prtcl/145,027,013,015
+chr14	18966891	18966912	-	chr22	15689422	15689443	+		prtcl/007,125,145,013
+chr14	21188108	21188129	+	chr22	23391621	23391642	+		prtcl/005,019,022,145
+chr14	49586858	49586899	-	chr22	21723051	21723072	-		prtcl/024,008,014,022
+chr1	61088450	61088683	-	chr1	61332509	61332570	+	NFIA-NFIA
+chr1	63774100	63774510	-	chr1	64009302	64009355	+	ROR1-ROR1
+chr16	89563023	89563104	-	chr19	56217164	56217186	-		prtcl/004,015,008,015,022,024
+chr17	34516886	34516907	-	chr17	79048118	79048159	+		prtcl/014,016,039,040
+chr17	58805547	58805568	-	chr22	15698174	15698195	+		prtcl/007,026,126
+chr1	92837624	92837645	-	chr22	42776577	42776598	-		prtcl/031,007,026,126
+chr20	26208429	26208490	-	chr22_KI270733v1_random	168995	169056	-	prtcl/016,025,038,147,148
+chr20	26209450	26209650	-	chr21	8433850	8434050	-		prtcl/141,126
+chr20	26209450	26209650	-	chr22_KI270733v1_random	122850	123050	-		prctl/025,014,026
+chr20	26209450	26209650	+	chr22_KI270733v1_random	168000	168350	+		prtcl/038
+chr20	8371379	8371430	-	chr20	8628292	8628355	+	PLCB1-PLCB1	
+chr2	131684647	131684688	-	chr14	19335477	19335538	-		prtcl/032,007,026
+chr2	132274729	132274770	+	chr3	132358003	132358064	+		prctl/007,001,039
+chr2	135509583	135509645	-	chr5	151804919	151804960	-	prtcl/026,126,145,147
+chr21	8395943	8396494	+	chr21	8440201	8440242	+		prtcl/035,007,001,039
+chr21	8438727	8439157	-	chr22	32089518	32089558	+		prtcl/125,151
+chr2	185483081	185483102	-	chr2	185729335	185729359	+		prtcl/152,008,039,125
+chr2	192054978	192055019	+	chr3	102553751	102553792	-		prtcl/151,007,050
+chr2	192149204	192149225	-	chr18	63702929	63702950	-		prtcl/001,151,005
+chr2	197805050	197805342	-	chr2	198083755	198086084	+	PLCL1-PCLC1
+chr2	231427548	231427569	-	chr15	92908982	92909183	-		prtcl/037,014,005
+chr2	47161760	47161801	+	chr13	41170903	41170944	-		prtcl/151,003,035,003
+chr2	55234912	55234953	-	chr6	113581726	113581767	+		prtcl/004,025,003,001
+chr2	61189497	61189518	+	chr19	4243214	4243235	-		prtcl/013,151,001,003
+chr2	63706867	63706888	-	chr19	52384767	52384868	-	prtcl/011,003,024
+chr2	73898346	73898368	+	chr16	2183080	2183101	-		prtcl/039,025,001
+chr2	73898346	73898368	+	chr21	29564441	29564462	-		prtcl/149,025,001
+chr2	74740960	74740971	+	chr17	38919028	38919039	+		prtcl/007,008,039,141,143
+chr8	47085260	47085281	+	chr14	19002353	19002374	-		prtcl/125,151,141,143
+chr8	47085260	47085281	+	chr14	19399402	19399423	+		prtcl/125,151,141,143
+chr8	47085260	47085281	+	chr22	15724969	15724990	-		prtcl/125,151,141,143
+chr6	113401866	113401887	-	chr14	24965330	24965351	+		prtcl/005,140,005,007
+chr3	131968997	131969018	-	chr3	131978033	131978054	-		prtcl/001,015,032,148
+chr5	117925121	117925133	-	chr5	118265352	118265364	+	LINC02147-LINC02147
+chr5	10571014	10571035	+	chr7	27150037	27150238	+		prtcl/013,005,015,032,148
+chr5	168883285	168883339	-	chr5	169193476	169193525	+	SLIT3-SLIT3
+chr3	188883471	188883492	-	chr20	56678190	56678211	+		prtcl/033,001,004,032
+chr6	38345002	38345095	-	chr6	38577598	38577650	+	BTBD9-BTBD9
+chr7	82159837	82159858	-	chr10	59143070	59143271	-		prtcl/147,005,0148
+chr5	55444119	55444320	+	chr12	49199677	49199698	+		prtcl/149,148,005,015,032
+chr6	73518630	73518831	+	chr15	52937807	52937828	-		prtcl/025,001,007,015,031
+chr9	131414392	131414433	+	chr14	35038495	35038516	+		prtcl/031,032,151,026
+chr2	83877611	83877652	-	chr7	64838341	64838953	+		prtcl/031,003,038,013,015
+chr6	113861005	113861026	+	chr21	26235606	26235627	+		prtcl/038,013,015
+chr4	167000375	167000466	-	chr4	167233982	167234150	+	SPOCK3-SPOCK3
+chr3	62779341	62779362	-	chr12	62965791	62965812	-		prtcl/024,038,013,015
+chr5	53886450	53886716	-	chr5	54113200	54113350	+	ARL15-ARL15
+chr8	117837125	117837204	-	chr8	118110082	118110224	+	EXT1-EXT1
+chr8	101493484	101493505	+	chr12	111055638	111055659	+		prtcl/003,038,013,015,001
+chr8	119862583	119862984	+	chr14	49586679	49587080	-		prtcl/007,015,016,019
+chrX	124963817	124963818	-	chrX	125185642	125185643	+	TENM1 new exon
+chr7	111413356	111413845	-	chr12	107809426	107809757	+	looks like real fusion	prtcl/149,022,035
+chr6	144200376	144200397	-	chr13	45337182	45337383	+		prtcl/019,035,013,014
+chr6	28740259	32621911	+	chr6_GL000255v2_alt	0	3881652	-	variation in human population
+chr6	28740259	32621911	-	chr6_GL000255v2_alt	0	3881652	+	variation in human population
+chr6	37819968	37820019	-	chr6	38061590	38061750	+	ZFAND3-ZFAND3
+chr6	54775241	54775262	+	chr12	25205680	25205781	+		prtcl/149,013,014
+chr4	45724000	45724021	+	chr12	53040262	53040463	-		prtcl/001,035,014
+chr4	2031624	2031645	+	chr18	58336577	58336618	+		prtcl/148,014,026,027,031,032
+chr3	116086345	116086559	-	chr3	116444875	116445010	+	LSAMP-LSAMP
+chr8	35235475	35235890	-	chr8	35549289	35549500	+	UNC5D-UNC5D
+chr5	116562731	116562752	-	chr5	150446919	150446940	-		prtcl/025,003,006,007
+chr4	77421365	77421386	+	chr15	36992057	36992078	+		prtcl/007,015,020,026,027
+chr3	61562150	61562375	-	chr3	61989622	61989785	+	PTPRG-PTPRG
+chr3	140175972	140176076	-	chr3	140403626	140403804	+	CLSTN2-CLSTN2
+chr8	59970452	59970473	+	chr19	56494324	56494365	-		prtcl/145,020,001,005,006
+chr3	184117340	184117441	+	chr14	102082992	102083093	+		prtcl/125,006,013,038,039
+chr3	170524077	170524098	+	chr4	185504464	185504485	+		prtcl/014,005,013,038,039,040
+chr8	89757560	89757581	-	chr17	7715548	7715568	+		prtcl/014,013,038,039
+chr9	33289240	33289261	+	chr19	13140383	13140404	-		prtcl/035,005,006,013,038,039
+chrX	132628100	132629095	-	chrX	132956805	132957225	+	HS6ST2-HS6ST2
+chr3	58115791	58115792	-	chr3	58116742	58116743	-		prtcl/015,005,006,013
+chrX	138857528	138857682	-	chrX	139204056	139204250	+	FGF13-FGF13
+chrX	68192918	68192919	+	chrX	68299096	68299097	-	PHN1 large circular
+chr3	114693550	114693578	-	chr3	114900301	114900324	+	ZBTB20-ZBTB20
+chr3	132027601	132027802	-	chr10	11434665	11434686	+		prtcl/147,022,038,013
+chr3	132390413	132390532	-	chr14	30617947	30618278	+		prtcl/147005038
+chr3	132357281	132357302	-	chr16	81605362	81605403	-		prtcl/141,147,038,005
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/blacklist-regions.hg38.bed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/blacklist-regions.hg38.bed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,2090 @@
+chr	pos	direction	id	comment
+chrM	0	16570	+	chrM
+chrM	0	16570	-	chrM
+chr22	22687199	22687280	-		s13304,s8828,s13419,s48452,s8612,s11338,s15680,s4836,s6408,s6411,s9064,s9608,s11341,s5930,s5950,s9592,s9777,s8984,s9584
+chr16	10532572	10532680	-		s6046,s11756,s11326,s13308,s6046,s11375,s13304,s11385,s7249,s11354,s11354,s11374,s11378,s13302,s13310,s7250,s11380,s11359,s10010,s11355,s11365,s11368,s11369,s13307,s11359,s11326
+chr4	81594218	81594232	+		s3297,s8979,s6721,s13298r2,s13418,s13761,s7239,s13302,s6408,s11385,s7316,s11743,s5946,s9770,s11366,s13307,s13625,s14455,s15681,s11386,s13626,s7310,s8977,s8980,s14436,s6727r1,s9066,s20343,s9775,s11745,s11750,s13754,s10011,s6719,s13761,s7318,s8616,s7318,s7454,s7239,s8616,s11391,s11402,s7220,s18749,s6408,s11397,s5946,s11385,s4954,s8978,s13755,s11754,s8980,s9775,s11764,s13302,s14442,s20401,s8981,s9544,s9585,s11368,s7239,s20405,s8615,s11324,s7454,s7454,s11751,s7318,s7454,s15679,s9584,s11326,s13428,s11368,s13418,s18037,s10011,s11359,s13622,s6016,s11367,s13633,s15680,s13299r2,s13766,s14447,s15679,s20345,s4970,s13298r2,s14442,s7310,s8620,s11743,s13749,s8828,s14455,s20344,s13770,s8620,s9464,s9596,s10014,s11340,s13622,s13749,s15680,s15681,s18037,s5942,s8830,s13299r2,s6727r1,s18031,s13754,s9464,s13761,s7239,s7454,s9464,s7454,s11326,s5934,s8620,s11745,s20344,s11359,s13632,s15681,s7427,s7427r2,s8615,s13296,s18017,s4951,s5938,s8832,s11756,s13766,s9772,s6733,s8979,s13632,s7250,s9067,s20400,s11762,s9544,s13418,s14441,s14432,s5945,s7240,s6730,s13625,s14455,s20400,s6722,s20405,s9067,s6731,s18759,s13629,s6409,s11393,s11743,s13304,s4951,s5938,s5950,s15680,s9758,s20343,s7454,s15679,s14441,s9755,s9065,s11393,s11750,s13770,s10014,s13298r1,s20342,s74092,s11355,s9464,s13761,s18259,s20344,s9575,s7250,s5934,s6046,s11354,s13311,s11756,s9544,s9596,s9772,s11325,s8828,s9064,s11361,s13298r1,s13298r2,s13428,s14441,s13299r1,s20342,s4970,s7427,s7427r2,s8984,s13311,s13358,s9596,s9065,s18017,s9065,s7318,s13296,s7454,s7239,s11340,s11756,s14441,s7314,s11354,s11325,s8615,s5950,s7454,s13755,s6409,s8616,s9473,s14436,s11366,s9578,s8616,s18259,s14441,s7454,s13633,s8982,s13761,s20345,s11754,s13754,s5950,s11361,s14441,s13302,s5938,s13632,s15681,s14441,s13761,s9473,s7318,s7314,s15681,s11326,s7318,s7428,s11326,s9004,s6411,s11324,s7239,s9596,s8977,s14441,s14441,s8652,s8616,s4841,s13761
+chr4	81594284	81594304	-		s11750,s11326,s11324,s9578,s6727r1,s13761,s18758,s9066,s7239,s7239,s11326,s11366,s11326,s13622,s13761,s11326,s11354,s11367,s13298r1,s13766,s13770,s20404,s4958,s5946,s9066,s11324,s13633,s13311,s4954,s10011,s11324,s10014,s11326,s11745,s11751,s11326,s20342,s13296,s15679,s18259,s6046,s4970,s13622,s18020,s10014,s20345,s11326,s6721,s20344,s13761,s18748,s9473,s20345,s7239,s9473,s6046,s4970,s11326,s11324,s9473,s11326,s11326,s13632,s20401,s14447,s20345,s8616,s13422,s13623,s11326,s11326,s11326,s11326,s7314,s11391,s7239,s15680,s9473,s11324,s20345,s20345,s13297,s11325,s13358,s11325,s4954,s6720,s8652,s13428,s20345,s18017,s11324,s11326,s20345,s13296,s15680,s13766,s9065,s7314,s8615,s20345,s20345,s7239,s10014,s7239,s7318,s7318,s13761,s11324,s20342,s8652,s13418,s11326,s14441,s11324,s7427,s7427r2,s7239,s7239,s11368,s18037,s6719,s11326,s7454,s20345,s8828,s9596,s20345,s13299r2,s18759,s11326,s18259,s20343,s7239,s18017,s13299r1,s13633,s13749,s14441,s11751,s20345,s4970,s9464,s7318,s20342,s7314,s8615,s11367,s13749,s13632,s8982,s8984,s11324,s13622,s20345,s13626,s14442,s6046,s11326,s13296,s13358,s9063,s13302,s8620,s13311,s14441,s9578,s10014,s13761,s8620,s11324,s11324,s11326
+chr1	1883668	1883765	+	rRNA_region_0	LSU-rRNA_Hsa
+chr1	7816373	7816413	+	rRNA_region_1	5S
+chr1	9437707	9437778	-	rRNA_region_2	5S
+chr1	13596638	13596677	-	rRNA_region_3	5S
+chr1	13623210	13623284	-	rRNA_region_4	5S
+chr1	15650369	15650411	-	rRNA_region_5	5S
+chr1	25157017	25157130	-	rRNA_region_6	LSU-rRNA_Hsa
+chr1	27916098	27916143	-	rRNA_region_7	LSU-rRNA_Hsa
+chr1	30329251	30329330	-	rRNA_region_8	LSU-rRNA_Hsa
+chr1	31110694	31110745	+	rRNA_region_9	5S
+chr1	31378559	31378598	-	rRNA_region_10	5S
+chr1	32367668	32367748	+	rRNA_region_11	SSU-rRNA_Hsa
+chr1	34112949	34113038	+	rRNA_region_12	5S
+chr1	36702638	36702680	-	rRNA_region_13	5S
+chr1	36849904	36849967	-	rRNA_region_14	LSU-rRNA_Hsa
+chr1	37264688	37264786	-	rRNA_region_15	5S
+chr1	38888816	38888864	-	rRNA_region_16	LSU-rRNA_Hsa
+chr1	39154206	39154296	-	rRNA_region_17	5S
+chr1	39207761	39207803	+	rRNA_region_18	5S
+chr1	41466936	41467027	-	rRNA_region_19	5S
+chr1	42313627	42313800	+	rRNA_region_20	LSU-rRNA_Hsa
+chr1	42490645	42490688	+	rRNA_region_21	5S
+chr1	42580101	42580502	+	rRNA_region_22	LSU-rRNA_Hsa
+chr1	42749792	42749972	-	rRNA_region_23	LSU-rRNA_Hsa
+chr1	43196416	43196506	+	rRNA_region_24	5S
+chr1	44014878	44014921	-	rRNA_region_25	5S
+chr1	44670386	44670465	-	rRNA_region_26	5S
+chr1	44932322	44932424	+	rRNA_region_27	5S
+chr1	45489874	45489926	-	rRNA_region_28	5S
+chr1	46436796	46436894	-	rRNA_region_29	LSU-rRNA_Hsa
+chr1	51058633	51058675	-	rRNA_region_30	5S
+chr1	51973410	51973505	+	rRNA_region_31	5S
+chr1	58747990	58748099	+	rRNA_region_32	5S
+chr1	63186333	63186427	-	rRNA_region_33	5S
+chr1	63890861	63890900	+	rRNA_region_34	5S
+chr1	64689119	64689158	-	rRNA_region_35	5S
+chr1	66550819	66550862	-	rRNA_region_36	5S
+chr1	67992807	67992951	-	rRNA_region_37	SSU-rRNA_Hsa
+chr1	67996224	67996791	-	rRNA_region_38	SSU-rRNA_Hsa
+chr1	68796366	68796420	-	rRNA_region_39	5S
+chr1	72176950	72176992	-	rRNA_region_40	5S
+chr1	73749535	73749626	-	rRNA_region_41	5S
+chr1	75774651	75774785	-	rRNA_region_42	LSU-rRNA_Hsa
+chr1	77614868	77614940	+	rRNA_region_43	5S
+chr1	77779897	77779987	+	rRNA_region_44	5S
+chr1	78094805	78094905	-	rRNA_region_45	5S
+chr1	78375188	78375267	-	rRNA_region_46	5S
+chr1	80385407	80385448	+	rRNA_region_47	5S
+chr1	85883677	85883797	-	rRNA_region_48	5S
+chr1	87453283	87453373	-	rRNA_region_49	5S
+chr1	88560142	88560183	-	rRNA_region_50	5S
+chr1	91387228	91387590	-	rRNA_region_51	LSU-rRNA_Hsa
+chr1	92189752	92189809	+	rRNA_region_52	5S
+chr1	92507170	92507245	-	rRNA_region_53	LSU-rRNA_Hsa
+chr1	93488330	93488452	-	rRNA_region_54	5S
+chr1	95089178	95089228	+	rRNA_region_55	5S
+chr1	99806382	99806535	+	rRNA_region_56	SSU-rRNA_Hsa
+chr1	105431075	105431119	+	rRNA_region_57	5S
+chr1	107570449	107571011	-	rRNA_region_58	LSU-rRNA_Hsa
+chr1	107571030	107571107	-	rRNA_region_59	LSU-rRNA_Hsa
+chr1	109243558	109243671	+	rRNA_region_60	LSU-rRNA_Hsa
+chr1	109577601	109577675	+	rRNA_region_61	5S
+chr1	111041833	111041923	+	rRNA_region_62	5S
+chr1	116962374	116962452	-	rRNA_region_63	5S
+chr1	118264401	118264489	-	rRNA_region_64	5S
+chr1	120001260	120001502	-	rRNA_region_65	LSU-rRNA_Hsa
+chr1	120561961	120562003	+	rRNA_region_66	5S
+chr1	120789061	120789303	+	rRNA_region_67	LSU-rRNA_Hsa
+chr1	121411378	121411419	-	rRNA_region_68	5S
+chr1	143439606	143439693	+	rRNA_region_69	5S
+chr1	144265218	144265305	+	rRNA_region_70	5S
+chr1	144701070	144701157	-	rRNA_region_71	5S
+chr1	145828195	145828257	+	rRNA_region_72	5S
+chr1	146160703	146160945	-	rRNA_region_73	LSU-rRNA_Hsa
+chr1	146539577	146539666	-	rRNA_region_74	5S
+chr1	148193712	148193801	+	rRNA_region_75	5S
+chr1	148611621	148611863	-	rRNA_region_76	LSU-rRNA_Hsa
+chr1	148948913	148948955	-	rRNA_region_77	5S
+chr1	149459404	149459646	+	rRNA_region_78	LSU-rRNA_Hsa
+chr1	150266793	150266884	-	rRNA_region_79	LSU-rRNA_Hsa
+chr1	153901875	153901917	+	rRNA_region_80	5S
+chr1	153938785	153938827	+	rRNA_region_81	5S
+chr1	157170022	157170097	+	rRNA_region_82	LSU-rRNA_Hsa
+chr1	159178472	159178562	+	rRNA_region_83	5S
+chr1	160175818	160175869	-	rRNA_region_84	5S
+chr1	162338642	162338722	+	rRNA_region_85	5S
+chr1	163468515	163468605	-	rRNA_region_86	5S
+chr1	163509483	163509572	+	rRNA_region_87	5S
+chr1	164869165	164869205	+	rRNA_region_88	5S
+chr1	166042243	166042350	+	rRNA_region_89	5S
+chr1	166671059	166671122	+	rRNA_region_90	LSU-rRNA_Hsa
+chr1	167005958	167006079	+	rRNA_region_91	5S
+chr1	168826686	168826793	+	rRNA_region_92	SSU-rRNA_Hsa
+chr1	169067263	169067340	+	rRNA_region_93	5S
+chr1	169909550	169909773	-	rRNA_region_94	LSU-rRNA_Hsa
+chr1	171713440	171713482	-	rRNA_region_95	5S
+chr1	173721645	173721806	+	rRNA_region_96	LSU-rRNA_Hsa
+chr1	173921069	173921147	+	rRNA_region_97	5S
+chr1	173969315	173969436	-	rRNA_region_98	5S
+chr1	174765280	174765322	+	rRNA_region_99	5S
+chr1	175693701	175693746	+	rRNA_region_100	5S
+chr1	176982529	176982573	+	rRNA_region_101	5S
+chr1	178560912	178561001	+	rRNA_region_102	5S
+chr1	181771565	181771655	+	rRNA_region_103	5S
+chr1	182212452	182212502	-	rRNA_region_104	LSU-rRNA_Hsa
+chr1	182944404	182944489	-	rRNA_region_105	5S
+chr1	185014948	185015067	-	rRNA_region_106	5S
+chr1	186372627	186372717	+	rRNA_region_107	5S
+chr1	189666176	189666255	-	rRNA_region_108	5S
+chr1	189777914	189777959	-	rRNA_region_109	5S
+chr1	192970797	192970838	+	rRNA_region_110	5S
+chr1	198084500	198084539	+	rRNA_region_111	5S
+chr1	200459648	200459784	-	rRNA_region_112	LSU-rRNA_Hsa
+chr1	204562410	204562521	-	rRNA_region_113	5S
+chr1	204707340	204707428	-	rRNA_region_114	5S
+chr1	207186292	207186344	+	rRNA_region_115	5S
+chr1	207502385	207502427	-	rRNA_region_116	5S
+chr1	207540740	207540790	-	rRNA_region_117	5S
+chr1	207559297	207559347	-	rRNA_region_118	5S
+chr1	207576348	207576398	-	rRNA_region_119	5S
+chr1	207675333	207675376	-	rRNA_region_120	5S
+chr1	207708930	207708980	-	rRNA_region_121	5S
+chr1	207830305	207830431	-	rRNA_region_122	5S
+chr1	208590529	208590633	+	rRNA_region_123	5S
+chr1	211625710	211625774	-	rRNA_region_124	LSU-rRNA_Hsa
+chr1	211626541	211626724	-	rRNA_region_125	LSU-rRNA_Hsa
+chr1	219662674	219662716	+	rRNA_region_126	5S
+chr1	219761788	219761873	+	rRNA_region_127	5S
+chr1	222349426	222349537	+	rRNA_region_128	LSU-rRNA_Hsa
+chr1	222696538	222696628	-	rRNA_region_129	5S
+chr1	224663201	224663257	-	rRNA_region_130	5S
+chr1	225261910	225261950	+	rRNA_region_131	5S
+chr1	226468142	226468184	-	rRNA_region_132	5S
+chr1	227561180	227561302	+	rRNA_region_133	5S
+chr1	228555792	228555903	+	rRNA_region_134	5S
+chr1	228558283	228558364	-	rRNA_region_135	5S
+chr1	228610265	228610386	-	rRNA_region_136	5S
+chr1	228612506	228612627	-	rRNA_region_137	5S
+chr1	228614747	228614868	-	rRNA_region_138	5S
+chr1	228616988	228617109	-	rRNA_region_139	5S
+chr1	228619229	228619350	-	rRNA_region_140	5S
+chr1	228621444	228621565	-	rRNA_region_141	5S
+chr1	228623664	228623785	-	rRNA_region_142	5S
+chr1	228625906	228626027	-	rRNA_region_143	5S
+chr1	228628145	228628266	-	rRNA_region_144	5S
+chr1	228630387	228630508	-	rRNA_region_145	5S
+chr1	228632628	228632749	-	rRNA_region_146	5S
+chr1	228634868	228634989	-	rRNA_region_147	5S
+chr1	228637093	228637214	-	rRNA_region_148	5S
+chr1	228639334	228639455	-	rRNA_region_149	5S
+chr1	228641565	228641686	-	rRNA_region_150	5S
+chr1	228643806	228643927	-	rRNA_region_151	5S
+chr1	228646037	228646158	-	rRNA_region_152	5S
+chr1	228647910	228648032	-	rRNA_region_153	5S
+chr1	229549904	229550024	+	rRNA_region_154	5S
+chr1	230820249	230820360	+	rRNA_region_155	5S
+chr1	231281447	231281528	-	rRNA_region_156	5S
+chr1	231374319	231374512	-	rRNA_region_157	LSU-rRNA_Hsa
+chr1	234301245	234301283	-	rRNA_region_158	5S
+chr1	237603008	237603464	+	rRNA_region_159	LSU-rRNA_Hsa
+chr1	237817127	237817166	+	rRNA_region_160	5S
+chr1	238676587	238676637	-	rRNA_region_161	5S
+chr1	239700862	239700901	+	rRNA_region_162	5S
+chr1	241945558	241945689	-	rRNA_region_163	LSU-rRNA_Hsa
+chr1	241955080	241955118	+	rRNA_region_164	5S
+chr1	242134271	242134382	+	rRNA_region_165	5S
+chr1	247204567	247204661	-	rRNA_region_166	5S
+chr1	247440659	247440697	+	rRNA_region_167	5S
+chr2	2738070	2738112	+	rRNA_region_168	5S
+chr2	11517397	11517504	+	rRNA_region_169	5S
+chr2	11561664	11561779	-	rRNA_region_170	5S
+chr2	12045746	12045788	-	rRNA_region_171	5S
+chr2	15531368	15531418	+	rRNA_region_172	5S
+chr2	20286885	20286927	+	rRNA_region_173	5S
+chr2	20401636	20401724	-	rRNA_region_174	5S
+chr2	22338885	22339003	-	rRNA_region_175	5S
+chr2	22652699	22652749	-	rRNA_region_176	5S
+chr2	24364499	24364544	+	rRNA_region_177	LSU-rRNA_Hsa
+chr2	24364636	24364770	+	rRNA_region_178	LSU-rRNA_Hsa
+chr2	24564627	24564738	-	rRNA_region_179	5S
+chr2	26571733	26571775	-	rRNA_region_180	5S
+chr2	27901703	27901745	+	rRNA_region_181	5S
+chr2	28558048	28558091	-	rRNA_region_182	5S
+chr2	28683975	28684056	+	rRNA_region_183	5S
+chr2	31228311	31228402	+	rRNA_region_184	5S
+chr2	32117321	32117462	+	rRNA_region_185	LSU-rRNA_Hsa
+chr2	32844143	32844208	+	rRNA_region_186	SSU-rRNA_Hsa
+chr2	33234362	33234404	-	rRNA_region_187	5S
+chr2	33285798	33285887	-	rRNA_region_188	5S
+chr2	33332897	33332984	+	rRNA_region_189	5S
+chr2	34857651	34857694	-	rRNA_region_190	5S
+chr2	37078107	37078165	+	rRNA_region_191	SSU-rRNA_Hsa
+chr2	37317797	37317887	-	rRNA_region_192	5S
+chr2	44865885	44865927	-	rRNA_region_193	5S
+chr2	47186931	47186970	+	rRNA_region_194	5S
+chr2	48342686	48342728	+	rRNA_region_195	5S
+chr2	49969666	49969756	-	rRNA_region_196	5S
+chr2	53843928	53843976	+	rRNA_region_197	LSU-rRNA_Hsa
+chr2	53946413	53946455	+	rRNA_region_198	5S
+chr2	56235231	56235330	-	rRNA_region_199	5S
+chr2	59322179	59322268	+	rRNA_region_200	5S
+chr2	59603595	59603824	-	rRNA_region_201	LSU-rRNA_Hsa
+chr2	59694761	59694851	+	rRNA_region_202	5S
+chr2	60998751	60998838	+	rRNA_region_203	5S
+chr2	61665357	61665424	+	rRNA_region_204	LSU-rRNA_Hsa
+chr2	63208791	63209186	-	rRNA_region_205	LSU-rRNA_Hsa
+chr2	63209240	63209505	-	rRNA_region_206	LSU-rRNA_Hsa
+chr2	63770208	63770250	+	rRNA_region_207	5S
+chr2	64875962	64876020	-	rRNA_region_208	LSU-rRNA_Hsa
+chr2	69181923	69182003	-	rRNA_region_209	5S
+chr2	72262465	72262516	+	rRNA_region_210	5S
+chr2	73626878	73626934	-	rRNA_region_211	5S
+chr2	73687217	73687273	-	rRNA_region_212	5S
+chr2	73968117	73968205	-	rRNA_region_213	5S
+chr2	76772908	76773001	+	rRNA_region_214	5S
+chr2	78701595	78701866	+	rRNA_region_215	LSU-rRNA_Hsa
+chr2	81496237	81496327	-	rRNA_region_216	5S
+chr2	87492610	87492655	+	rRNA_region_217	LSU-rRNA_Hsa
+chr2	89600572	89600659	+	rRNA_region_218	5S
+chr2	91674858	91674945	+	rRNA_region_219	5S
+chr2	96956725	96956815	-	rRNA_region_220	5S
+chr2	97304700	97304806	-	rRNA_region_221	5S
+chr2	97403695	97403801	+	rRNA_region_222	5S
+chr2	98592213	98592289	-	rRNA_region_223	LSU-rRNA_Hsa
+chr2	100404565	100404602	-	rRNA_region_224	5S
+chr2	100552651	100552690	-	rRNA_region_225	5S
+chr2	111457570	111457615	-	rRNA_region_226	LSU-rRNA_Hsa
+chr2	114317697	114317739	-	rRNA_region_227	5S
+chr2	114828202	114828245	+	rRNA_region_228	5S
+chr2	114937440	114937704	-	rRNA_region_229	LSU-rRNA_Hsa
+chr2	114937714	114937805	+	rRNA_region_230	5S
+chr2	115752159	115752216	-	rRNA_region_231	5S
+chr2	116242739	116242777	+	rRNA_region_232	5S
+chr2	117023203	117023349	+	rRNA_region_233	LSU-rRNA_Hsa
+chr2	117891948	117891986	+	rRNA_region_234	5S
+chr2	121078621	121078952	+	rRNA_region_235	SSU-rRNA_Hsa
+chr2	121799962	121800005	-	rRNA_region_236	5S
+chr2	124932914	124932993	+	rRNA_region_237	5S
+chr2	127291567	127291807	-	rRNA_region_238	LSU-rRNA_Hsa
+chr2	127291830	127291912	-	rRNA_region_239	LSU-rRNA_Hsa
+chr2	127292264	127292289	-	rRNA_region_240	LSU-rRNA_Hsa
+chr2	128445078	128445192	-	rRNA_region_241	5S
+chr2	130826667	130826718	-	rRNA_region_242	5S
+chr2	132254346	132256195	-	rRNA_region_243	SSU-rRNA_Hsa
+chr2	132278677	132281663	-	rRNA_region_244	LSU-rRNA_Hsa
+chr2	134231195	134231284	+	rRNA_region_245	5S
+chr2	136863472	136863516	+	rRNA_region_246	5S
+chr2	137512124	137512212	-	rRNA_region_247	5S
+chr2	139732661	139732703	-	rRNA_region_248	5S
+chr2	142680431	142680473	-	rRNA_region_249	5S
+chr2	147713474	147713554	-	rRNA_region_250	5S
+chr2	148467506	148467547	+	rRNA_region_251	5S
+chr2	154590409	154590508	+	rRNA_region_252	5S
+chr2	158449402	158449450	-	rRNA_region_253	5S
+chr2	158449748	158449802	-	rRNA_region_254	5S
+chr2	158583879	158584285	-	rRNA_region_255	LSU-rRNA_Hsa
+chr2	159593884	159593949	-	rRNA_region_256	5S
+chr2	160014398	160014440	+	rRNA_region_257	5S
+chr2	160654743	160654780	-	rRNA_region_258	5S
+chr2	162496936	162497025	+	rRNA_region_259	5S
+chr2	162718204	162718247	-	rRNA_region_260	5S
+chr2	164150153	164150196	+	rRNA_region_261	5S
+chr2	164150207	164150250	+	rRNA_region_262	5S
+chr2	164858431	164858539	+	rRNA_region_263	5S
+chr2	164895687	164895777	-	rRNA_region_264	5S
+chr2	169343402	169343489	-	rRNA_region_265	LSU-rRNA_Hsa
+chr2	177138701	177138803	+	rRNA_region_266	5S
+chr2	182048821	182048912	+	rRNA_region_267	5S
+chr2	182491651	182491691	+	rRNA_region_268	5S
+chr2	188276755	188276844	-	rRNA_region_269	5S
+chr2	190537921	190538060	-	rRNA_region_270	LSU-rRNA_Hsa
+chr2	193519311	193519360	-	rRNA_region_271	5S
+chr2	194343992	194344034	+	rRNA_region_272	5S
+chr2	194729694	194729736	+	rRNA_region_273	5S
+chr2	197160699	197160814	+	rRNA_region_274	5S
+chr2	198601546	198601588	+	rRNA_region_275	5S
+chr2	200259735	200259794	+	rRNA_region_276	SSU-rRNA_Hsa
+chr2	200849042	200849144	-	rRNA_region_277	5S
+chr2	201929180	201929220	+	rRNA_region_278	5S
+chr2	202346265	202346374	-	rRNA_region_279	LSU-rRNA_Hsa
+chr2	208054160	208054257	-	rRNA_region_280	5S
+chr2	208920544	208920664	-	rRNA_region_281	5S
+chr2	209572462	209572557	+	rRNA_region_282	LSU-rRNA_Hsa
+chr2	209721931	209722020	-	rRNA_region_283	5S
+chr2	211535652	211535742	+	rRNA_region_284	5S
+chr2	213258112	213258160	+	rRNA_region_285	5S
+chr2	213501013	213501122	-	rRNA_region_286	5S
+chr2	213772302	213772378	+	rRNA_region_287	5S
+chr2	214707332	214707374	-	rRNA_region_288	5S
+chr2	216793516	216793600	-	rRNA_region_289	5S
+chr2	222235623	222235774	+	rRNA_region_290	LSU-rRNA_Hsa
+chr2	225022326	225022409	-	rRNA_region_291	SSU-rRNA_Hsa
+chr2	227763063	227763152	-	rRNA_region_292	5S
+chr2	228596210	228596252	+	rRNA_region_293	5S
+chr2	229151036	229151107	+	rRNA_region_294	LSU-rRNA_Hsa
+chr2	229180771	229180922	-	rRNA_region_295	LSU-rRNA_Hsa
+chr2	229180914	229181018	-	rRNA_region_296	LSU-rRNA_Hsa
+chr2	231245354	231245476	+	rRNA_region_297	LSU-rRNA_Hsa
+chr2	231822424	231822467	+	rRNA_region_298	5S
+chr2	234189597	234189639	+	rRNA_region_299	5S
+chr2	235026955	235026998	-	rRNA_region_300	5S
+chr2	241584967	241585057	+	rRNA_region_301	5S
+chr3	5024743	5024795	+	rRNA_region_302	5S
+chr3	9134268	9134373	-	rRNA_region_303	LSU-rRNA_Hsa
+chr3	12155030	12155071	-	rRNA_region_304	5S
+chr3	12326811	12326853	-	rRNA_region_305	5S
+chr3	12511093	12511211	-	rRNA_region_306	5S
+chr3	14394647	14394759	+	rRNA_region_307	5S
+chr3	15303617	15303683	+	rRNA_region_308	LSU-rRNA_Hsa
+chr3	18148238	18148278	+	rRNA_region_309	5S
+chr3	18229710	18229897	+	rRNA_region_310	LSU-rRNA_Hsa
+chr3	19825951	19825993	+	rRNA_region_311	5S
+chr3	22863505	22863618	-	rRNA_region_312	LSU-rRNA_Hsa
+chr3	23726591	23726662	+	rRNA_region_313	LSU-rRNA_Hsa
+chr3	24021587	24021649	+	rRNA_region_314	LSU-rRNA_Hsa
+chr3	25025006	25025093	+	rRNA_region_315	5S
+chr3	25352292	25352392	-	rRNA_region_316	5S
+chr3	27517353	27517398	+	rRNA_region_317	5S
+chr3	27847725	27847871	-	rRNA_region_318	SSU-rRNA_Hsa
+chr3	28083269	28083311	-	rRNA_region_319	5S
+chr3	29857745	29857806	-	rRNA_region_320	5S
+chr3	30031251	30031296	-	rRNA_region_321	5S
+chr3	31228714	31228803	+	rRNA_region_322	5S
+chr3	33492008	33492098	-	rRNA_region_323	5S
+chr3	37341648	37341738	+	rRNA_region_324	5S
+chr3	41384522	41384572	-	rRNA_region_325	5S
+chr3	44322668	44322704	-	rRNA_region_326	5S
+chr3	45453275	45453360	-	rRNA_region_327	LSU-rRNA_Hsa
+chr3	46458393	46458449	-	rRNA_region_328	5S
+chr3	46652283	46652325	+	rRNA_region_329	5S
+chr3	49076218	49076522	+	rRNA_region_330	LSU-rRNA_Hsa
+chr3	49411203	49411244	-	rRNA_region_331	5S
+chr3	49412752	49412818	+	rRNA_region_332	5S
+chr3	49467144	49467231	-	rRNA_region_333	5S
+chr3	49950023	49950469	+	rRNA_region_334	SSU-rRNA_Hsa
+chr3	50419781	50419901	+	rRNA_region_335	5S
+chr3	50524561	50524603	+	rRNA_region_336	5S
+chr3	50758507	50758548	+	rRNA_region_337	5S
+chr3	51694462	51694582	-	rRNA_region_338	5S
+chr3	56185125	56185224	+	rRNA_region_339	5S
+chr3	57814123	57814183	-	rRNA_region_340	LSU-rRNA_Hsa
+chr3	61082874	61082964	-	rRNA_region_341	5S
+chr3	61632531	61632573	-	rRNA_region_342	5S
+chr3	61699197	61699237	-	rRNA_region_343	5S
+chr3	63545439	63545520	+	rRNA_region_344	5S
+chr3	67834405	67834536	-	rRNA_region_345	LSU-rRNA_Hsa
+chr3	68882967	68883045	+	rRNA_region_346	5S
+chr3	69231033	69231129	+	rRNA_region_347	5S
+chr3	72691722	72691811	-	rRNA_region_348	5S
+chr3	72745796	72745836	+	rRNA_region_349	5S
+chr3	79109915	79109955	+	rRNA_region_350	SSU-rRNA_Hsa
+chr3	79787732	79787817	+	rRNA_region_351	5S
+chr3	84120231	84120302	+	rRNA_region_352	LSU-rRNA_Hsa
+chr3	94519113	94519155	-	rRNA_region_353	5S
+chr3	99900473	99900515	-	rRNA_region_354	5S
+chr3	100420167	100420221	-	rRNA_region_355	5S
+chr3	106837265	106837311	-	rRNA_region_356	5S
+chr3	108531246	108531521	+	rRNA_region_357	LSU-rRNA_Hsa
+chr3	114449744	114449796	-	rRNA_region_358	5S
+chr3	118266922	118267008	+	rRNA_region_359	LSU-rRNA_Hsa
+chr3	119529395	119529476	+	rRNA_region_360	LSU-rRNA_Hsa
+chr3	121741466	121741508	+	rRNA_region_361	5S
+chr3	122090621	122090669	+	rRNA_region_362	5S
+chr3	123015841	123015969	-	rRNA_region_363	LSU-rRNA_Hsa
+chr3	125058348	125058438	-	rRNA_region_364	5S
+chr3	125339856	125339898	-	rRNA_region_365	5S
+chr3	126564588	126564677	-	rRNA_region_366	5S
+chr3	127963607	127963697	+	rRNA_region_367	5S
+chr3	129920215	129920258	+	rRNA_region_368	5S
+chr3	131417843	131417998	-	rRNA_region_369	SSU-rRNA_Hsa
+chr3	133485850	133485918	-	rRNA_region_370	5S
+chr3	133486229	133486262	-	rRNA_region_371	5S
+chr3	133710085	133710175	-	rRNA_region_372	5S
+chr3	134783465	134783555	-	rRNA_region_373	5S
+chr3	136530419	136530468	-	rRNA_region_374	5S
+chr3	137518165	137518255	-	rRNA_region_375	5S
+chr3	138709570	138709649	+	rRNA_region_376	SSU-rRNA_Hsa
+chr3	139082435	139082523	-	rRNA_region_377	LSU-rRNA_Hsa
+chr3	142053627	142053692	+	rRNA_region_378	LSU-rRNA_Hsa
+chr3	142054902	142055388	+	rRNA_region_379	LSU-rRNA_Hsa
+chr3	142380474	142380512	-	rRNA_region_380	5S
+chr3	142591701	142591791	-	rRNA_region_381	5S
+chr3	142665816	142665905	-	rRNA_region_382	LSU-rRNA_Hsa
+chr3	144186903	144187020	-	rRNA_region_383	5S
+chr3	145224846	145224889	+	rRNA_region_384	5S
+chr3	148650637	148650757	+	rRNA_region_385	LSU-rRNA_Hsa
+chr3	149318668	149318764	-	rRNA_region_386	5S
+chr3	151188098	151188184	+	rRNA_region_387	5S
+chr3	155376006	155376049	-	rRNA_region_388	5S
+chr3	156106223	156106262	-	rRNA_region_389	5S
+chr3	157173915	157174040	-	rRNA_region_390	5S
+chr3	158846577	158846657	-	rRNA_region_391	5S
+chr3	158982962	158983009	+	rRNA_region_392	LSU-rRNA_Hsa
+chr3	160428422	160428525	+	rRNA_region_393	LSU-rRNA_Hsa
+chr3	160718438	160718523	+	rRNA_region_394	5S
+chr3	166508825	166508887	-	rRNA_region_395	5S
+chr3	169623545	169623587	+	rRNA_region_396	5S
+chr3	173011460	173011498	-	rRNA_region_397	5S
+chr3	174129188	174129290	+	rRNA_region_398	LSU-rRNA_Hsa
+chr3	176763228	176763313	+	rRNA_region_399	5S
+chr3	177311754	177311795	-	rRNA_region_400	5S
+chr3	178429199	178429289	-	rRNA_region_401	5S
+chr3	179351308	179351350	-	rRNA_region_402	5S
+chr3	179779555	179779718	+	rRNA_region_403	LSU-rRNA_Hsa
+chr3	180161886	180161977	-	rRNA_region_404	5S
+chr3	181822870	181822990	-	rRNA_region_405	5S
+chr3	183258326	183258416	-	rRNA_region_406	5S
+chr3	185461199	185461241	-	rRNA_region_407	5S
+chr3	186123318	186123359	-	rRNA_region_408	5S
+chr3	186253619	186253700	+	rRNA_region_409	5S
+chr3	188920158	188920200	-	rRNA_region_410	5S
+chr3	189547876	189547919	-	rRNA_region_411	5S
+chr3	192688549	192688600	+	rRNA_region_412	5S
+chr3	194473586	194473639	+	rRNA_region_413	5S
+chr3	196176878	196176926	-	rRNA_region_414	LSU-rRNA_Hsa
+chr3	197357756	197357808	-	rRNA_region_415	5S
+chr4	4345138	4345180	-	rRNA_region_416	5S
+chr4	7582459	7582637	+	rRNA_region_417	LSU-rRNA_Hsa
+chr4	8393014	8393126	+	rRNA_region_418	5S
+chr4	9411202	9411253	-	rRNA_region_419	5S
+chr4	9792771	9792859	-	rRNA_region_420	5S
+chr4	10115794	10115884	-	rRNA_region_421	5S
+chr4	10561711	10561834	+	rRNA_region_422	LSU-rRNA_Hsa
+chr4	11414048	11414160	-	rRNA_region_423	5S
+chr4	13724633	13724671	+	rRNA_region_424	5S
+chr4	19181781	19181869	-	rRNA_region_425	5S
+chr4	21718535	21718571	+	rRNA_region_426	5S
+chr4	29527665	29527705	-	rRNA_region_427	5S
+chr4	34852366	34852419	-	rRNA_region_428	5S
+chr4	38758800	38758892	-	rRNA_region_429	5S
+chr4	39936779	39936855	+	rRNA_region_430	5S
+chr4	40531242	40531284	-	rRNA_region_431	5S
+chr4	40990153	40990275	+	rRNA_region_432	5S
+chr4	42583616	42583709	-	rRNA_region_433	SSU-rRNA_Hsa
+chr4	56097390	56097479	+	rRNA_region_434	5S
+chr4	56331164	56331236	-	rRNA_region_435	5S
+chr4	67439992	67440051	+	rRNA_region_436	5S
+chr4	67442047	67442115	+	rRNA_region_437	5S
+chr4	69430863	69431035	-	rRNA_region_438	LSU-rRNA_Hsa
+chr4	71759525	71759616	-	rRNA_region_439	5S
+chr4	73771515	73771559	-	rRNA_region_440	5S
+chr4	73904445	73904535	-	rRNA_region_441	5S
+chr4	75886022	75886544	+	rRNA_region_442	LSU-rRNA_Hsa
+chr4	76515867	76516022	+	rRNA_region_443	LSU-rRNA_Hsa
+chr4	76762006	76762088	+	rRNA_region_444	5S
+chr4	77208404	77208735	-	rRNA_region_445	LSU-rRNA_Hsa
+chr4	77212297	77212397	-	rRNA_region_446	LSU-rRNA_Hsa
+chr4	79875805	79875885	-	rRNA_region_447	SSU-rRNA_Hsa
+chr4	86047088	86047243	-	rRNA_region_448	LSU-rRNA_Hsa
+chr4	91264681	91264769	-	rRNA_region_449	5S
+chr4	93820189	93820261	+	rRNA_region_450	5S
+chr4	103164920	103164979	-	rRNA_region_451	5S
+chr4	103744578	103744623	+	rRNA_region_452	5S
+chr4	107003225	107003526	-	rRNA_region_453	LSU-rRNA_Hsa
+chr4	107003531	107003747	-	rRNA_region_454	LSU-rRNA_Hsa
+chr4	116299757	116299846	+	rRNA_region_455	LSU-rRNA_Hsa
+chr4	119237369	119237535	+	rRNA_region_456	LSU-rRNA_Hsa
+chr4	122598670	122598721	-	rRNA_region_457	5S
+chr4	123157615	123157666	-	rRNA_region_458	5S
+chr4	125750423	125750481	+	rRNA_region_459	5S
+chr4	130506668	130506775	-	rRNA_region_460	5S
+chr4	133161759	133161866	-	rRNA_region_461	LSU-rRNA_Hsa
+chr4	133788842	133789301	+	rRNA_region_462	LSU-rRNA_Hsa
+chr4	141248933	141249070	+	rRNA_region_463	LSU-rRNA_Hsa
+chr4	146447185	146447235	-	rRNA_region_464	5S
+chr4	147745344	147745417	-	rRNA_region_465	5S
+chr4	148557946	148558037	+	rRNA_region_466	5S
+chr4	149495864	149496032	+	rRNA_region_467	SSU-rRNA_Hsa
+chr4	149847917	149848149	+	rRNA_region_468	LSU-rRNA_Hsa
+chr4	149907559	149907649	+	rRNA_region_469	5S
+chr4	150402225	150402267	-	rRNA_region_470	5S
+chr4	150772922	150772964	+	rRNA_region_471	5S
+chr4	150967529	150967545	-	rRNA_region_472	5S
+chr4	150970705	150970778	-	rRNA_region_473	5S
+chr4	151971528	151971599	-	rRNA_region_474	5S
+chr4	151972024	151972043	-	rRNA_region_475	5S
+chr4	153238602	153238767	+	rRNA_region_476	SSU-rRNA_Hsa
+chr4	154429183	154429247	+	rRNA_region_477	LSU-rRNA_Hsa
+chr4	154604676	154604792	+	rRNA_region_478	LSU-rRNA_Hsa
+chr4	156445812	156445854	-	rRNA_region_479	5S
+chr4	161281763	161281845	-	rRNA_region_480	SSU-rRNA_Hsa
+chr4	166053187	166053293	-	rRNA_region_481	5S
+chr4	166142572	166142711	+	rRNA_region_482	LSU-rRNA_Hsa
+chr4	166143170	166143511	+	rRNA_region_483	LSU-rRNA_Hsa
+chr4	166918382	166918491	-	rRNA_region_484	5S
+chr4	177457138	177457228	-	rRNA_region_485	5S
+chr4	178406694	178406797	+	rRNA_region_486	5S
+chr4	190015137	190015257	+	rRNA_region_487	5S
+chr4	190017696	190017817	+	rRNA_region_488	5S
+chr5	3352915	3353044	-	rRNA_region_489	LSU-rRNA_Hsa
+chr5	6347606	6347641	-	rRNA_region_490	5S
+chr5	6658677	6658737	-	rRNA_region_491	5S
+chr5	6981834	6981876	-	rRNA_region_492	5S
+chr5	6982069	6982111	-	rRNA_region_493	5S
+chr5	7047226	7047337	+	rRNA_region_494	5S
+chr5	9760906	9760995	+	rRNA_region_495	5S
+chr5	10373929	10374976	+	rRNA_region_496	SSU-rRNA_Hsa
+chr5	10376523	10376654	+	rRNA_region_497	SSU-rRNA_Hsa
+chr5	10376719	10377035	+	rRNA_region_498	SSU-rRNA_Hsa
+chr5	14903351	14903393	-	rRNA_region_499	5S
+chr5	16033267	16033355	-	rRNA_region_500	5S
+chr5	16853993	16854087	+	rRNA_region_501	5S
+chr5	17156991	17157073	-	rRNA_region_502	5S
+chr5	25493237	25493267	-	rRNA_region_503	5S
+chr5	33134794	33134844	-	rRNA_region_504	5S
+chr5	33277860	33277953	-	rRNA_region_505	5S
+chr5	34038272	34038440	+	rRNA_region_506	LSU-rRNA_Hsa
+chr5	34802279	34802368	+	rRNA_region_507	5S
+chr5	34861954	34862127	+	rRNA_region_508	LSU-rRNA_Hsa
+chr5	35763024	35763066	-	rRNA_region_509	5S
+chr5	36485344	36485432	+	rRNA_region_510	5S
+chr5	38074824	38074867	+	rRNA_region_511	5S
+chr5	39397527	39397604	+	rRNA_region_512	5S
+chr5	41357001	41357090	-	rRNA_region_513	SSU-rRNA_Hsa
+chr5	44637923	44637974	+	rRNA_region_514	5S
+chr5	51886687	51886761	+	rRNA_region_515	5S
+chr5	52517845	52517945	-	rRNA_region_516	LSU-rRNA_Hsa
+chr5	53472859	53472915	+	rRNA_region_517	LSU-rRNA_Hsa
+chr5	55184937	55185027	-	rRNA_region_518	5S
+chr5	55777470	55777585	+	rRNA_region_519	5S
+chr5	56146765	56146846	-	rRNA_region_520	5S
+chr5	56260356	56260444	-	rRNA_region_521	5S
+chr5	56643403	56643500	+	rRNA_region_522	5S
+chr5	62814520	62814562	-	rRNA_region_523	5S
+chr5	64395210	64395300	-	rRNA_region_524	5S
+chr5	64718878	64718918	-	rRNA_region_525	5S
+chr5	66129055	66129248	-	rRNA_region_526	LSU-rRNA_Hsa
+chr5	66129245	66129401	-	rRNA_region_527	LSU-rRNA_Hsa
+chr5	66176584	66176627	-	rRNA_region_528	5S
+chr5	71493002	71493086	-	rRNA_region_529	5S
+chr5	71850917	71851115	+	rRNA_region_530	LSU-rRNA_Hsa
+chr5	76091710	76091797	-	rRNA_region_531	5S
+chr5	80650040	80650129	-	rRNA_region_532	LSU-rRNA_Hsa
+chr5	81447668	81447710	-	rRNA_region_533	5S
+chr5	81762216	81762259	-	rRNA_region_534	5S
+chr5	84846211	84846252	+	rRNA_region_535	5S
+chr5	86963146	86963188	-	rRNA_region_536	5S
+chr5	86963568	86963611	-	rRNA_region_537	5S
+chr5	88218264	88218306	-	rRNA_region_538	5S
+chr5	88274257	88274376	-	rRNA_region_539	5S
+chr5	91900992	91901034	-	rRNA_region_540	5S
+chr5	97389170	97389364	-	rRNA_region_541	LSU-rRNA_Hsa
+chr5	97990722	97990775	-	rRNA_region_542	5S
+chr5	100293755	100293798	+	rRNA_region_543	5S
+chr5	102131051	102131141	-	rRNA_region_544	5S
+chr5	103726372	103726515	+	rRNA_region_545	LSU-rRNA_Hsa
+chr5	105923020	105923114	-	rRNA_region_546	5S
+chr5	114399295	114399331	-	rRNA_region_547	5S
+chr5	115144963	115145002	+	rRNA_region_548	5S
+chr5	116818087	116818130	+	rRNA_region_549	5S
+chr5	118777230	118777279	+	rRNA_region_550	5S
+chr5	119072499	119072531	+	rRNA_region_551	5S
+chr5	119445720	119445835	+	rRNA_region_552	5S
+chr5	123654915	123655317	+	rRNA_region_553	LSU-rRNA_Hsa
+chr5	123655309	123655354	+	rRNA_region_554	LSU-rRNA_Hsa
+chr5	130114402	130114492	+	rRNA_region_555	5S
+chr5	132740942	132740984	+	rRNA_region_556	5S
+chr5	132848576	132848666	+	rRNA_region_557	5S
+chr5	136969214	136969304	-	rRNA_region_558	5S
+chr5	138133503	138133545	+	rRNA_region_559	5S
+chr5	138220502	138220544	-	rRNA_region_560	5S
+chr5	139012329	139012420	+	rRNA_region_561	5S
+chr5	139299852	139299961	+	rRNA_region_562	5S
+chr5	140507195	140507245	+	rRNA_region_563	5S
+chr5	140732086	140732174	-	rRNA_region_564	5S
+chr5	142120282	142120323	+	rRNA_region_565	5S
+chr5	146555982	146556104	+	rRNA_region_566	LSU-rRNA_Hsa
+chr5	146586110	146586200	-	rRNA_region_567	5S
+chr5	147420926	147420974	-	rRNA_region_568	5S
+chr5	149050702	149050741	+	rRNA_region_569	5S
+chr5	149473458	149473499	+	rRNA_region_570	5S
+chr5	149947488	149947579	-	rRNA_region_571	5S
+chr5	150926936	150926987	+	rRNA_region_572	5S
+chr5	151477457	151477577	-	rRNA_region_573	5S
+chr5	151875603	151875692	-	rRNA_region_574	5S
+chr5	152138406	152138449	-	rRNA_region_575	5S
+chr5	154335702	154335744	+	rRNA_region_576	5S
+chr5	155408562	155408800	+	rRNA_region_577	LSU-rRNA_Hsa
+chr5	155845436	155845527	+	rRNA_region_578	5S
+chr5	156084446	156084535	-	rRNA_region_579	5S
+chr5	157199880	157200049	+	rRNA_region_580	LSU-rRNA_Hsa
+chr5	158033225	158033273	-	rRNA_region_581	5S
+chr5	162879969	162879995	-	rRNA_region_582	5S
+chr5	163485206	163485247	-	rRNA_region_583	5S
+chr5	166805500	166805552	+	rRNA_region_584	5S
+chr5	168239583	168239646	-	rRNA_region_585	5S
+chr5	173216257	173216307	-	rRNA_region_586	5S
+chr5	173292533	173292623	-	rRNA_region_587	5S
+chr5	175114739	175115174	-	rRNA_region_588	SSU-rRNA_Hsa
+chr6	3079838	3079897	-	rRNA_region_589	5S
+chr6	3088719	3088809	-	rRNA_region_590	5S
+chr6	4427962	4428082	+	rRNA_region_591	5S
+chr6	5830480	5830522	-	rRNA_region_592	5S
+chr6	7775969	7776006	+	rRNA_region_593	5S
+chr6	10752788	10752926	-	rRNA_region_594	5S
+chr6	12390042	12390091	+	rRNA_region_595	5S
+chr6	13988764	13988804	+	rRNA_region_596	5S
+chr6	14404281	14404323	-	rRNA_region_597	5S
+chr6	15035087	15035160	-	rRNA_region_598	LSU-rRNA_Hsa
+chr6	15522231	15522300	-	rRNA_region_599	5S
+chr6	16425257	16425320	-	rRNA_region_600	LSU-rRNA_Hsa
+chr6	17721784	17721898	-	rRNA_region_601	5S
+chr6	19438282	19438373	+	rRNA_region_602	5S
+chr6	22691087	22691226	-	rRNA_region_603	LSU-rRNA_Hsa
+chr6	22947964	22948121	-	rRNA_region_604	LSU-rRNA_Hsa
+chr6	23007782	23007871	-	rRNA_region_605	LSU-rRNA_Hsa
+chr6	23008839	23008924	+	rRNA_region_606	LSU-rRNA_Hsa
+chr6	27772329	27772371	-	rRNA_region_607	5S
+chr6	28156261	28156299	-	rRNA_region_608	5S
+chr6	28202033	28202093	+	rRNA_region_609	LSU-rRNA_Hsa
+chr6	29762139	29762208	-	rRNA_region_610	LSU-rRNA_Hsa
+chr6	31225279	31225318	+	rRNA_region_611	SSU-rRNA_Hsa
+chr6	32078535	32078627	-	rRNA_region_612	5S
+chr6	36564682	36564761	+	rRNA_region_613	SSU-rRNA_Hsa
+chr6	37344945	37344983	-	rRNA_region_614	5S
+chr6	37386590	37386792	+	rRNA_region_615	LSU-rRNA_Hsa
+chr6	41239517	41239625	-	rRNA_region_616	5S
+chr6	41924430	41924472	-	rRNA_region_617	5S
+chr6	42587804	42587846	+	rRNA_region_618	5S
+chr6	42642076	42642126	-	rRNA_region_619	5S
+chr6	43418093	43418180	+	rRNA_region_620	5S
+chr6	43657838	43657926	+	rRNA_region_621	5S
+chr6	43752842	43752951	+	rRNA_region_622	5S
+chr6	44977543	44977619	+	rRNA_region_623	5S
+chr6	47107136	47107175	-	rRNA_region_624	5S
+chr6	51185004	51185100	+	rRNA_region_625	LSU-rRNA_Hsa
+chr6	52932973	52933014	-	rRNA_region_626	5S
+chr6	66065096	66065186	+	rRNA_region_627	5S
+chr6	67467218	67467306	-	rRNA_region_628	5S
+chr6	68983362	68983406	+	rRNA_region_629	5S
+chr6	69473179	69473266	-	rRNA_region_630	LSU-rRNA_Hsa
+chr6	73306414	73306467	-	rRNA_region_631	LSU-rRNA_Hsa
+chr6	73475923	73476080	+	rRNA_region_632	LSU-rRNA_Hsa
+chr6	74168085	74168140	+	rRNA_region_633	LSU-rRNA_Hsa
+chr6	75865256	75865335	-	rRNA_region_634	5S
+chr6	76232298	76232337	-	rRNA_region_635	5S
+chr6	79454602	79454637	-	rRNA_region_636	5S
+chr6	81550978	81551040	+	rRNA_region_637	LSU-rRNA_Hsa
+chr6	81622200	81622299	+	rRNA_region_638	5S
+chr6	84283140	84283212	+	rRNA_region_639	SSU-rRNA_Hsa
+chr6	87639249	87639294	-	rRNA_region_640	5S
+chr6	90251326	90251368	-	rRNA_region_641	5S
+chr6	94064904	94064946	-	rRNA_region_642	5S
+chr6	99581219	99581289	-	rRNA_region_643	LSU-rRNA_Hsa
+chr6	104543270	104543314	+	rRNA_region_644	5S
+chr6	105324101	105324160	+	rRNA_region_645	LSU-rRNA_Hsa
+chr6	105519888	105519951	+	rRNA_region_646	LSU-rRNA_Hsa
+chr6	106449378	106449463	+	rRNA_region_647	5S
+chr6	108252400	108252488	+	rRNA_region_648	5S
+chr6	109688844	109688888	-	rRNA_region_649	5S
+chr6	109753165	109753255	-	rRNA_region_650	5S
+chr6	114151282	114151550	+	rRNA_region_651	LSU-rRNA_Hsa
+chr6	114220696	114220785	-	rRNA_region_652	5S
+chr6	114952048	114952099	-	rRNA_region_653	5S
+chr6	116178246	116178333	-	rRNA_region_654	5S
+chr6	117060686	117060796	+	rRNA_region_655	5S
+chr6	118027852	118027892	-	rRNA_region_656	5S
+chr6	118718836	118718871	+	rRNA_region_657	5S
+chr6	120262295	120262401	+	rRNA_region_658	LSU-rRNA_Hsa
+chr6	120686620	120686712	+	rRNA_region_659	5S
+chr6	125979875	125979934	-	rRNA_region_660	5S
+chr6	126065805	126065847	-	rRNA_region_661	5S
+chr6	127317884	127317973	-	rRNA_region_662	5S
+chr6	128698638	128698725	+	rRNA_region_663	5S
+chr6	129493396	129493489	-	rRNA_region_664	5S
+chr6	132080157	132080207	-	rRNA_region_665	5S
+chr6	133272806	133273028	+	rRNA_region_666	LSU-rRNA_Hsa
+chr6	134257034	134257144	+	rRNA_region_667	5S
+chr6	134674642	134674909	+	rRNA_region_668	LSU-rRNA_Hsa
+chr6	135275821	135275863	-	rRNA_region_669	5S
+chr6	136630239	136630328	+	rRNA_region_670	5S
+chr6	136738007	136738088	-	rRNA_region_671	SSU-rRNA_Hsa
+chr6	137037585	137037697	+	rRNA_region_672	LSU-rRNA_Hsa
+chr6	137306008	137306050	+	rRNA_region_673	5S
+chr6	138376915	138376957	+	rRNA_region_674	5S
+chr6	140158614	140158694	-	rRNA_region_675	5S
+chr6	143449808	143449887	+	rRNA_region_676	5S
+chr6	144370891	144371039	-	rRNA_region_677	LSU-rRNA_Hsa
+chr6	144371060	144371150	-	rRNA_region_678	LSU-rRNA_Hsa
+chr6	146340425	146340509	+	rRNA_region_679	5S
+chr6	150344017	150344145	+	rRNA_region_680	SSU-rRNA_Hsa
+chr6	151836845	151837121	-	rRNA_region_681	SSU-rRNA_Hsa
+chr6	152289945	152290033	-	rRNA_region_682	5S
+chr6	152410274	152410396	+	rRNA_region_683	5S
+chr6	152735799	152735837	-	rRNA_region_684	5S
+chr6	153159255	153159345	-	rRNA_region_685	5S
+chr6	153420440	153420526	+	rRNA_region_686	5S
+chr6	160786496	160786581	-	rRNA_region_687	5S
+chr6	161870085	161870175	-	rRNA_region_688	5S
+chr6	162052033	162052076	-	rRNA_region_689	5S
+chr6	163485192	163485233	-	rRNA_region_690	5S
+chr6	165409561	165409651	+	rRNA_region_691	5S
+chr6	170400317	170400430	+	rRNA_region_692	5S
+chr7	2985542	2985632	-	rRNA_region_693	LSU-rRNA_Hsa
+chr7	5131197	5131239	-	rRNA_region_694	5S
+chr7	5834775	5834817	+	rRNA_region_695	5S
+chr7	11954721	11954763	+	rRNA_region_696	5S
+chr7	14576115	14576157	-	rRNA_region_697	5S
+chr7	22298593	22298683	+	rRNA_region_698	5S
+chr7	22998059	22998101	-	rRNA_region_699	5S
+chr7	24132708	24132794	+	rRNA_region_700	5S
+chr7	25610291	25610333	+	rRNA_region_701	5S
+chr7	26053862	26053904	+	rRNA_region_702	5S
+chr7	33083611	33083715	+	rRNA_region_703	LSU-rRNA_Hsa
+chr7	33177739	33177831	+	rRNA_region_704	5S
+chr7	36410832	36410874	-	rRNA_region_705	5S
+chr7	36566398	36566495	+	rRNA_region_706	LSU-rRNA_Hsa
+chr7	36593683	36593769	-	rRNA_region_707	5S
+chr7	40262245	40262292	+	rRNA_region_708	5S
+chr7	44125793	44125872	-	rRNA_region_709	5S
+chr7	46080552	46080592	+	rRNA_region_710	5S
+chr7	48632764	48632809	+	rRNA_region_711	LSU-rRNA_Hsa
+chr7	55043102	55043141	-	rRNA_region_712	5S
+chr7	66550604	66550694	-	rRNA_region_713	5S
+chr7	67216447	67216492	-	rRNA_region_714	5S
+chr7	68321754	68321803	-	rRNA_region_715	LSU-rRNA_Hsa
+chr7	68723961	68724051	-	rRNA_region_716	5S
+chr7	69062383	69062801	+	rRNA_region_717	LSU-rRNA_Hsa
+chr7	71913741	71913855	-	rRNA_region_718	5S
+chr7	72597558	72597603	+	rRNA_region_719	5S
+chr7	74487446	74487540	-	rRNA_region_720	5S
+chr7	74596801	74596891	-	rRNA_region_721	5S
+chr7	74662928	74662981	-	rRNA_region_722	LSU-rRNA_Hsa
+chr7	78802462	78802569	-	rRNA_region_723	LSU-rRNA_Hsa
+chr7	79654110	79654198	+	rRNA_region_724	5S
+chr7	81276023	81276093	+	rRNA_region_725	LSU-rRNA_Hsa
+chr7	81333591	81333831	+	rRNA_region_726	SSU-rRNA_Hsa
+chr7	83017898	83018012	+	rRNA_region_727	5S
+chr7	88967900	88968010	+	rRNA_region_728	5S
+chr7	89776885	89776925	+	rRNA_region_729	5S
+chr7	92414183	92414225	+	rRNA_region_730	5S
+chr7	92806753	92806789	-	rRNA_region_731	LSU-rRNA_Hsa
+chr7	95243191	95243275	+	rRNA_region_732	LSU-rRNA_Hsa
+chr7	96711417	96711470	-	rRNA_region_733	5S
+chr7	99265832	99265874	-	rRNA_region_734	5S
+chr7	99468236	99468584	-	rRNA_region_735	LSU-rRNA_Hsa
+chr7	99614568	99614611	-	rRNA_region_736	5S
+chr7	102325078	102325190	-	rRNA_region_737	LSU-rRNA_Hsa
+chr7	104896321	104896411	+	rRNA_region_738	5S
+chr7	104990097	104990313	+	rRNA_region_739	LSU-rRNA_Hsa
+chr7	105001335	105001419	-	rRNA_region_740	LSU-rRNA_Hsa
+chr7	105325850	105326085	+	rRNA_region_741	LSU-rRNA_Hsa
+chr7	106781615	106781708	-	rRNA_region_742	5S
+chr7	106885672	106885724	-	rRNA_region_743	5S
+chr7	108286692	108286733	-	rRNA_region_744	5S
+chr7	114613784	114613905	-	rRNA_region_745	5S
+chr7	116944324	116944414	-	rRNA_region_746	5S
+chr7	120897225	120897300	-	rRNA_region_747	5S
+chr7	120981454	120981553	-	rRNA_region_748	5S
+chr7	121083727	121083817	-	rRNA_region_749	5S
+chr7	122763818	122763868	-	rRNA_region_750	5S
+chr7	126283097	126283139	+	rRNA_region_751	5S
+chr7	126519653	126519695	+	rRNA_region_752	5S
+chr7	128434939	128434980	+	rRNA_region_753	5S
+chr7	128478033	128478125	-	rRNA_region_754	LSU-rRNA_Hsa
+chr7	128697451	128697558	+	rRNA_region_755	5S
+chr7	128697690	128697744	+	rRNA_region_756	5S
+chr7	129756265	129756353	+	rRNA_region_757	5S
+chr7	130027276	130027364	+	rRNA_region_758	5S
+chr7	130602792	130602913	-	rRNA_region_759	5S
+chr7	132239804	132239846	-	rRNA_region_760	5S
+chr7	133987921	133988003	+	rRNA_region_761	5S
+chr7	136177445	136177552	-	rRNA_region_762	LSU-rRNA_Hsa
+chr7	140370438	140370527	+	rRNA_region_763	5S
+chr7	140386778	140386890	-	rRNA_region_764	5S
+chr7	140786926	140786977	+	rRNA_region_765	5S
+chr7	141407542	141407584	+	rRNA_region_766	5S
+chr7	143454020	143454133	+	rRNA_region_767	LSU-rRNA_Hsa
+chr7	147849883	147849962	+	rRNA_region_768	5S
+chr7	148784304	148784393	-	rRNA_region_769	5S
+chr7	150114739	150114778	+	rRNA_region_770	5S
+chr7	152592974	152593090	-	rRNA_region_771	5S
+chr7	153986040	153986079	-	rRNA_region_772	5S
+chr8	5111799	5111837	+	rRNA_region_773	5S
+chr8	3700491	3700571	+	rRNA_region_774	5S
+chr8	4181234	4181275	+	rRNA_region_775	5S
+chr8	7392421	7392511	+	rRNA_region_776	5S
+chr8	7919393	7919483	-	rRNA_region_777	5S
+chr8	8831418	8831487	+	rRNA_region_778	5S
+chr8	9876694	9876764	-	rRNA_region_779	5S
+chr8	10686568	10686681	+	rRNA_region_780	5S
+chr8	12087408	12087459	-	rRNA_region_781	5S
+chr8	12333656	12333707	-	rRNA_region_782	5S
+chr8	13536028	13536108	+	rRNA_region_783	5S
+chr8	13721989	13722035	+	rRNA_region_784	5S
+chr8	17748117	17748208	+	rRNA_region_785	5S
+chr8	19854543	19855019	+	rRNA_region_786	LSU-rRNA_Hsa
+chr8	20077129	20077231	+	rRNA_region_787	LSU-rRNA_Hsa
+chr8	20290173	20290263	+	rRNA_region_788	5S
+chr8	21598460	21598795	+	rRNA_region_789	LSU-rRNA_Hsa
+chr8	26136880	26136999	+	rRNA_region_790	5S
+chr8	28530410	28530499	+	rRNA_region_791	5S
+chr8	29048514	29048603	-	rRNA_region_792	5S
+chr8	29503329	29503366	+	rRNA_region_793	LSU-rRNA_Hsa
+chr8	31598114	31598204	-	rRNA_region_794	5S
+chr8	32153576	32153619	+	rRNA_region_795	5S
+chr8	32192077	32192148	-	rRNA_region_796	5S
+chr8	32256495	32256608	+	rRNA_region_797	5S
+chr8	33013359	33013533	+	rRNA_region_798	LSU-rRNA_Hsa
+chr8	36764444	36764518	+	rRNA_region_799	5S
+chr8	39256135	39256175	+	rRNA_region_800	5S
+chr8	43124466	43124516	-	rRNA_region_801	5S
+chr8	43204699	43204813	+	rRNA_region_802	5S
+chr8	46039948	46040475	-	rRNA_region_803	LSU-rRNA_Hsa
+chr8	46040473	46040560	-	rRNA_region_804	LSU-rRNA_Hsa
+chr8	48463396	48463473	-	rRNA_region_805	LSU-rRNA_Hsa
+chr8	49167891	49167939	-	rRNA_region_806	5S
+chr8	51546305	51546393	+	rRNA_region_807	5S
+chr8	52090655	52090697	-	rRNA_region_808	5S
+chr8	55745229	55745317	+	rRNA_region_809	5S
+chr8	55842473	55842782	-	rRNA_region_810	LSU-rRNA_Hsa
+chr8	55909094	55909477	-	rRNA_region_811	LSU-rRNA_Hsa
+chr8	56289328	56289369	-	rRNA_region_812	5S
+chr8	57126672	57126759	-	rRNA_region_813	5S
+chr8	59455884	59455974	+	rRNA_region_814	5S
+chr8	60243602	60243644	+	rRNA_region_815	5S
+chr8	62138991	62139043	-	rRNA_region_816	5S
+chr8	62454924	62455140	+	rRNA_region_817	LSU-rRNA_Hsa
+chr8	65598124	65598166	-	rRNA_region_818	5S
+chr8	67099302	67099392	+	rRNA_region_819	5S
+chr8	68306205	68306561	-	rRNA_region_820	LSU-rRNA_Hsa
+chr8	68306559	68306687	+	rRNA_region_821	LSU-rRNA_Hsa
+chr8	68695656	68695732	+	rRNA_region_822	5S
+chr8	69690013	69690385	-	rRNA_region_823	LSU-rRNA_Hsa
+chr8	69929904	69930024	+	rRNA_region_824	5S
+chr8	70916474	70916520	+	rRNA_region_825	5S
+chr8	71074184	71074225	-	rRNA_region_826	5S
+chr8	72357732	72357805	+	rRNA_region_827	5S
+chr8	75993890	75993941	-	rRNA_region_828	5S
+chr8	76368125	76368233	-	rRNA_region_829	LSU-rRNA_Hsa
+chr8	76907462	76907516	+	rRNA_region_830	5S
+chr8	83761547	83761589	+	rRNA_region_831	5S
+chr8	86116643	86116689	-	rRNA_region_832	5S
+chr8	88396461	88396547	-	rRNA_region_833	5S
+chr8	90511135	90511241	+	rRNA_region_834	5S
+chr8	92167460	92167550	-	rRNA_region_835	5S
+chr8	93441276	93441366	+	rRNA_region_836	5S
+chr8	93697385	93697460	+	rRNA_region_837	5S
+chr8	96845735	96845777	-	rRNA_region_838	5S
+chr8	97565505	97565710	+	rRNA_region_839	LSU-rRNA_Hsa
+chr8	99974107	99974166	+	rRNA_region_840	5S
+chr8	101537951	101538094	-	rRNA_region_841	LSU-rRNA_Hsa
+chr8	102479261	102479308	-	rRNA_region_842	LSU-rRNA_Hsa
+chr8	102521183	102521234	-	rRNA_region_843	5S
+chr8	105194652	105194693	-	rRNA_region_844	5S
+chr8	107884493	107884612	+	rRNA_region_845	5S
+chr8	108292362	108292433	-	rRNA_region_846	LSU-rRNA_Hsa
+chr8	108524612	108524692	-	rRNA_region_847	5S
+chr8	110978451	110978491	-	rRNA_region_848	5S
+chr8	112334110	112334150	-	rRNA_region_849	5S
+chr8	113013454	113013498	-	rRNA_region_850	5S
+chr8	116022702	116022789	-	rRNA_region_851	5S
+chr8	116940059	116940097	-	rRNA_region_852	5S
+chr8	119891159	119891229	-	rRNA_region_853	5S
+chr8	120373888	120373930	-	rRNA_region_854	5S
+chr8	121174903	121174945	-	rRNA_region_855	5S
+chr8	122945833	122945875	+	rRNA_region_856	5S
+chr8	123220459	123220510	+	rRNA_region_857	5S
+chr8	132754273	132754315	+	rRNA_region_858	5S
+chr8	137459955	137460031	+	rRNA_region_859	5S
+chr8	138803379	138803450	-	rRNA_region_860	5S
+chr8	139678155	139678267	-	rRNA_region_861	LSU-rRNA_Hsa
+chr8	140940561	140940664	+	rRNA_region_862	5S
+chr9	401793	401835	+	rRNA_region_863	5S
+chr9	1212195	1212358	-	rRNA_region_864	SSU-rRNA_Hsa
+chr9	1333833	1333923	+	rRNA_region_865	5S
+chr9	4691651	4691745	-	rRNA_region_866	LSU-rRNA_Hsa
+chr9	4799734	4800000	-	rRNA_region_867	SSU-rRNA_Hsa
+chr9	7071820	7071862	+	rRNA_region_868	5S
+chr9	7622268	7622335	+	rRNA_region_869	LSU-rRNA_Hsa
+chr9	8740132	8740176	+	rRNA_region_870	5S
+chr9	15220865	15220964	+	rRNA_region_871	5S
+chr9	17001119	17001243	-	rRNA_region_872	LSU-rRNA_Hsa
+chr9	19278554	19278595	+	rRNA_region_873	LSU-rRNA_Hsa
+chr9	19492827	19492990	-	rRNA_region_874	LSU-rRNA_Hsa
+chr9	22108405	22108441	-	rRNA_region_875	5S
+chr9	26081083	26081196	-	rRNA_region_876	LSU-rRNA_Hsa
+chr9	27198286	27198356	+	rRNA_region_877	5S
+chr9	28260564	28260628	+	rRNA_region_878	LSU-rRNA_Hsa
+chr9	29042225	29042267	+	rRNA_region_879	5S
+chr9	32537940	32538169	+	rRNA_region_880	SSU-rRNA_Hsa
+chr9	33219985	33220032	-	rRNA_region_881	LSU-rRNA_Hsa
+chr9	33658624	33658773	+	rRNA_region_882	LSU-rRNA_Hsa
+chr9	34206156	34206241	-	rRNA_region_883	5S
+chr9	37421883	37421966	-	rRNA_region_884	5S
+chr9	41237437	41237557	-	rRNA_region_885	5S
+chr9	62802317	62802438	-	rRNA_region_886	5S
+chr9	63813189	63813309	+	rRNA_region_887	5S
+chr9	69220268	69220310	-	rRNA_region_888	5S
+chr9	72299752	72299833	-	rRNA_region_889	5S
+chr9	73430305	73430346	-	rRNA_region_890	5S
+chr9	73750930	73750970	-	rRNA_region_891	5S
+chr9	73750970	73751058	-	rRNA_region_892	5S
+chr9	76571732	76572034	+	rRNA_region_893	LSU-rRNA_Hsa
+chr9	78888860	78888910	-	rRNA_region_894	5S
+chr9	81421720	81421806	+	rRNA_region_895	SSU-rRNA_Hsa
+chr9	81885496	81885575	+	rRNA_region_896	5S
+chr9	83083230	83083269	+	rRNA_region_897	5S
+chr9	84003501	84003540	+	rRNA_region_898	5S
+chr9	85467440	85467490	-	rRNA_region_899	5S
+chr9	87991541	87991582	+	rRNA_region_900	5S
+chr9	93600799	93600891	-	rRNA_region_901	5S
+chr9	95142446	95142541	-	rRNA_region_902	5S
+chr9	95905004	95905093	+	rRNA_region_903	5S
+chr9	99145876	99145965	-	rRNA_region_904	5S
+chr9	103290130	103290450	+	rRNA_region_905	LSU-rRNA_Hsa
+chr9	103689487	103689573	-	rRNA_region_906	5S
+chr9	104283594	104283669	+	rRNA_region_907	LSU-rRNA_Hsa
+chr9	104877433	104877486	-	rRNA_region_908	5S
+chr9	106843776	106843866	-	rRNA_region_909	5S
+chr9	107200782	107200861	+	rRNA_region_910	5S
+chr9	108636317	108636398	+	rRNA_region_911	5S
+chr9	110016217	110016259	+	rRNA_region_912	5S
+chr9	111411653	111411742	-	rRNA_region_913	5S
+chr9	112212360	112212402	-	rRNA_region_914	5S
+chr9	112252257	112252347	+	rRNA_region_915	5S
+chr9	121105132	121105213	+	rRNA_region_916	5S
+chr9	121490333	121490375	+	rRNA_region_917	5S
+chr9	124051458	124051534	-	rRNA_region_918	LSU-rRNA_Hsa
+chr9	127841149	127841217	-	rRNA_region_919	5S
+chr9	128668886	128668948	+	rRNA_region_920	LSU-rRNA_Hsa
+chr9	128686212	128686326	+	rRNA_region_921	LSU-rRNA_Hsa
+chr9	131189238	131189277	-	rRNA_region_922	5S
+chr9	134075051	134075113	+	rRNA_region_923	5S
+chr9	137792882	137793070	+	rRNA_region_924	LSU-rRNA_Hsa
+chrM	2589	2745	+	rRNA_region_925	LSU-rRNA_Hsa
+chrX	1300253	1300364	-	rRNA_region_926	5S
+chrX	9133828	9133948	+	rRNA_region_927	5S
+chrX	9403936	9404013	+	rRNA_region_928	5S
+chrX	9404183	9404288	+	rRNA_region_929	5S
+chrX	9406158	9406238	+	rRNA_region_930	5S
+chrX	9409883	9409989	+	rRNA_region_931	5S
+chrX	9410927	9411007	+	rRNA_region_932	5S
+chrX	9411859	9411975	+	rRNA_region_933	5S
+chrX	9412905	9412984	+	rRNA_region_934	5S
+chrX	9413949	9414029	+	rRNA_region_935	5S
+chrX	13241604	13241641	-	rRNA_region_936	5S
+chrX	13573877	13573935	+	rRNA_region_937	LSU-rRNA_Hsa
+chrX	13575638	13575838	+	rRNA_region_938	LSU-rRNA_Hsa
+chrX	16334242	16334286	+	rRNA_region_939	SSU-rRNA_Hsa
+chrX	16334683	16334780	+	rRNA_region_940	SSU-rRNA_Hsa
+chrX	17630237	17630279	+	rRNA_region_941	5S
+chrX	17823685	17823727	+	rRNA_region_942	5S
+chrX	23447716	23447767	+	rRNA_region_943	5S
+chrX	27708402	27708488	+	rRNA_region_944	5S
+chrX	28970736	28970809	+	rRNA_region_945	5S
+chrX	28982849	28982970	-	rRNA_region_946	5S
+chrX	30891068	30891224	+	rRNA_region_947	LSU-rRNA_Hsa
+chrX	32102064	32102154	+	rRNA_region_948	5S
+chrX	32593471	32593617	+	rRNA_region_949	SSU-rRNA_Hsa
+chrX	34215957	34216047	+	rRNA_region_950	SSU-rRNA_Hsa
+chrX	35512013	35512137	-	rRNA_region_951	LSU-rRNA_Hsa
+chrX	38053575	38053617	+	rRNA_region_952	5S
+chrX	41292797	41292887	+	rRNA_region_953	5S
+chrX	44705406	44705457	-	rRNA_region_954	5S
+chrX	47316112	47316178	-	rRNA_region_955	LSU-rRNA_Hsa
+chrX	47890039	47890403	-	rRNA_region_956	LSU-rRNA_Hsa
+chrX	48206257	48206348	+	rRNA_region_957	5S
+chrX	48223451	48223494	+	rRNA_region_958	5S
+chrX	48235352	48235452	-	rRNA_region_959	5S
+chrX	48562160	48562242	-	rRNA_region_960	5S
+chrX	48634873	48634915	+	rRNA_region_961	5S
+chrX	50802675	50802733	-	rRNA_region_962	5S
+chrX	52665230	52665321	+	rRNA_region_963	5S
+chrX	53746112	53746161	-	rRNA_region_964	5S
+chrX	53909053	53909163	+	rRNA_region_965	5S
+chrX	54377187	54377257	+	rRNA_region_966	LSU-rRNA_Hsa
+chrX	55261606	55261647	-	rRNA_region_967	5S
+chrX	57762627	57762677	-	rRNA_region_968	5S
+chrX	64141069	64141111	+	rRNA_region_969	5S
+chrX	69672478	69672599	+	rRNA_region_970	5S
+chrX	70253042	70253130	+	rRNA_region_971	5S
+chrX	71434964	71435005	+	rRNA_region_972	5S
+chrX	74356171	74356209	-	rRNA_region_973	5S
+chrX	76655037	76655127	-	rRNA_region_974	5S
+chrX	77066708	77066829	+	rRNA_region_975	5S
+chrX	77699457	77699512	+	rRNA_region_976	LSU-rRNA_Hsa
+chrX	77837199	77837237	+	rRNA_region_977	5S
+chrX	81394408	81394450	-	rRNA_region_978	5S
+chrX	85310073	85310150	-	rRNA_region_979	5S
+chrX	88828252	88828340	+	rRNA_region_980	LSU-rRNA_Hsa
+chrX	89480758	89480819	+	rRNA_region_981	LSU-rRNA_Hsa
+chrX	89480819	89480907	+	rRNA_region_982	LSU-rRNA_Hsa
+chrX	89480901	89480944	+	rRNA_region_983	LSU-rRNA_Hsa
+chrX	95582063	95582153	+	rRNA_region_984	5S
+chrX	97148596	97148674	+	rRNA_region_985	5S
+chrX	97517867	97518066	+	rRNA_region_986	LSU-rRNA_Hsa
+chrX	97518063	97518263	+	rRNA_region_987	LSU-rRNA_Hsa
+chrX	98898088	98898125	-	rRNA_region_988	5S
+chrX	102303257	102303296	+	rRNA_region_989	5S
+chrX	102383818	102383857	-	rRNA_region_990	5S
+chrX	103128418	103128453	+	rRNA_region_991	5S
+chrX	103850822	103850912	-	rRNA_region_992	5S
+chrX	105940147	105940188	-	rRNA_region_993	5S
+chrX	107592319	107592358	+	rRNA_region_994	5S
+chrX	107719320	107719362	+	rRNA_region_995	5S
+chrX	109054118	109054600	+	rRNA_region_996	LSU-rRNA_Hsa
+chrX	111669827	111669948	-	rRNA_region_997	5S
+chrX	114134293	114134343	-	rRNA_region_998	5S
+chrX	116389961	116390106	+	rRNA_region_999	LSU-rRNA_Hsa
+chrX	117000881	117000922	-	rRNA_region_1000	5S
+chrX	118199948	118200227	-	rRNA_region_1001	SSU-rRNA_Hsa
+chrX	123254190	123254233	+	rRNA_region_1002	5S
+chrX	124063481	124063524	-	rRNA_region_1003	5S
+chrX	124551192	124551231	-	rRNA_region_1004	5S
+chrX	129436530	129436647	-	rRNA_region_1005	5S
+chrX	129599754	129599796	-	rRNA_region_1006	5S
+chrX	129762302	129762344	-	rRNA_region_1007	5S
+chrX	131938866	131938955	-	rRNA_region_1008	5S
+chrX	134526280	134526420	-	rRNA_region_1009	LSU-rRNA_Hsa
+chrX	134974806	134974861	-	rRNA_region_1010	LSU-rRNA_Hsa
+chrX	135428165	135428284	-	rRNA_region_1011	5S
+chrX	140776227	140776442	+	rRNA_region_1012	LSU-rRNA_Hsa
+chrX	142411052	142411173	+	rRNA_region_1013	5S
+chrX	146427482	146427572	-	rRNA_region_1014	5S
+chrX	148008098	148008214	-	rRNA_region_1015	5S
+chrX	151026316	151026404	-	rRNA_region_1016	5S
+chrY	1300253	1300364	-	rRNA_region_1017	5S
+chrY	3136948	3137009	+	rRNA_region_1018	LSU-rRNA_Hsa
+chrY	3137009	3137100	+	rRNA_region_1019	LSU-rRNA_Hsa
+chrY	3137091	3137134	+	rRNA_region_1020	LSU-rRNA_Hsa
+chrY	10090407	10090527	-	rRNA_region_1021	5S
+chrY	10092872	10092993	-	rRNA_region_1022	5S
+chrY	10197255	10199103	+	rRNA_region_1023	SSU-rRNA_Hsa
+chrY	17557863	17557978	+	rRNA_region_1024	5S
+chrY	17559773	17559891	+	rRNA_region_1025	5S
+chrY	17580033	17580559	-	rRNA_region_1026	LSU-rRNA_Hsa
+chrY	17580557	17580644	-	rRNA_region_1027	LSU-rRNA_Hsa
+chrY	18325362	18325449	+	rRNA_region_1028	LSU-rRNA_Hsa
+chrY	18325447	18325973	+	rRNA_region_1029	LSU-rRNA_Hsa
+chrY	18346120	18346238	-	rRNA_region_1030	5S
+chrY	18348032	18348147	-	rRNA_region_1031	5S
+chrY	20520870	20520918	+	rRNA_region_1032	5S
+chr10	154853	154940	-	rRNA_region_1033	5S
+chr10	282035	282125	-	rRNA_region_1034	5S
+chr10	4134522	4134564	-	rRNA_region_1035	5S
+chr10	5299783	5299910	-	rRNA_region_1036	LSU-rRNA_Hsa
+chr10	5900317	5900359	-	rRNA_region_1037	5S
+chr10	8656715	8656831	-	rRNA_region_1038	5S
+chr10	9164326	9164407	+	rRNA_region_1039	LSU-rRNA_Hsa
+chr10	10323983	10324024	-	rRNA_region_1040	5S
+chr10	10324039	10324080	-	rRNA_region_1041	5S
+chr10	12924697	12924784	-	rRNA_region_1042	5S
+chr10	13727795	13727885	+	rRNA_region_1043	5S
+chr10	14663404	14663494	-	rRNA_region_1044	5S
+chr10	18618968	18619019	+	rRNA_region_1045	5S
+chr10	19633681	19633803	-	rRNA_region_1046	5S
+chr10	21165596	21165635	+	rRNA_region_1047	5S
+chr10	21858569	21858627	-	rRNA_region_1048	5S
+chr10	22997280	22997351	+	rRNA_region_1049	5S
+chr10	23868090	23868138	+	rRNA_region_1050	5S
+chr10	24640165	24640286	+	rRNA_region_1051	5S
+chr10	25813808	25813917	-	rRNA_region_1052	5S
+chr10	26509593	26509686	+	rRNA_region_1053	5S
+chr10	28874391	28874490	-	rRNA_region_1054	5S
+chr10	30814884	30814926	-	rRNA_region_1055	5S
+chr10	31259598	31259688	+	rRNA_region_1056	5S
+chr10	31539396	31539445	+	rRNA_region_1057	5S
+chr10	31833072	31833125	-	rRNA_region_1058	LSU-rRNA_Hsa
+chr10	32410318	32410698	-	rRNA_region_1059	LSU-rRNA_Hsa
+chr10	35081948	35082013	-	rRNA_region_1060	LSU-rRNA_Hsa
+chr10	37834967	37835020	+	rRNA_region_1061	LSU-rRNA_Hsa
+chr10	45856319	45856422	+	rRNA_region_1062	5S
+chr10	46807457	46807572	-	rRNA_region_1063	5S
+chr10	47532352	47532467	+	rRNA_region_1064	5S
+chr10	48040462	48040577	+	rRNA_region_1065	5S
+chr10	49702990	49703373	-	rRNA_region_1066	LSU-rRNA_Hsa
+chr10	49979664	49979779	-	rRNA_region_1067	5S
+chr10	53458187	53458275	+	rRNA_region_1068	5S
+chr10	53883462	53883591	-	rRNA_region_1069	LSU-rRNA_Hsa
+chr10	53894357	53894402	-	rRNA_region_1070	5S
+chr10	54175231	54175273	+	rRNA_region_1071	5S
+chr10	55599856	55600004	+	rRNA_region_1072	LSU-rRNA_Hsa
+chr10	59688077	59688370	-	rRNA_region_1073	LSU-rRNA_Hsa
+chr10	59919396	59919475	+	rRNA_region_1074	5S
+chr10	60517423	60517464	+	rRNA_region_1075	5S
+chr10	64812445	64812487	-	rRNA_region_1076	5S
+chr10	67045452	67045710	-	rRNA_region_1077	LSU-rRNA_Hsa
+chr10	68461406	68461526	+	rRNA_region_1078	5S
+chr10	69010398	69010533	-	rRNA_region_1079	LSU-rRNA_Hsa
+chr10	73706496	73706615	+	rRNA_region_1080	5S
+chr10	74227074	74227140	+	rRNA_region_1081	LSU-rRNA_Hsa
+chr10	77587049	77587138	+	rRNA_region_1082	5S
+chr10	77969913	77969998	-	rRNA_region_1083	LSU-rRNA_Hsa
+chr10	86052447	86052568	+	rRNA_region_1084	5S
+chr10	90178944	90178985	+	rRNA_region_1085	5S
+chr10	90213476	90213518	+	rRNA_region_1086	5S
+chr10	90686141	90686183	-	rRNA_region_1087	5S
+chr10	93303189	93303274	+	rRNA_region_1088	5S
+chr10	93510590	93510680	-	rRNA_region_1089	5S
+chr10	94192862	94192912	+	rRNA_region_1090	5S
+chr10	96619375	96619475	+	rRNA_region_1091	5S
+chr10	99439054	99439121	+	rRNA_region_1092	LSU-rRNA_Hsa
+chr10	104646766	104646851	+	rRNA_region_1093	LSU-rRNA_Hsa
+chr10	106970021	106970110	+	rRNA_region_1094	5S
+chr10	107345756	107345791	+	rRNA_region_1095	5S
+chr10	107461560	107461649	+	rRNA_region_1096	5S
+chr10	110761141	110761231	+	rRNA_region_1097	5S
+chr10	113703655	113703819	-	rRNA_region_1098	LSU-rRNA_Hsa
+chr10	118290701	118290742	-	rRNA_region_1099	5S
+chr10	120529693	120529758	+	rRNA_region_1100	LSU-rRNA_Hsa
+chr10	121816793	121816835	+	rRNA_region_1101	5S
+chr10	122957583	122957625	+	rRNA_region_1102	5S
+chr10	125622611	125622666	-	rRNA_region_1103	5S
+chr10	126145492	126145582	-	rRNA_region_1104	5S
+chr10	126574813	126574882	+	rRNA_region_1105	5S
+chr11	6016995	6017112	+	rRNA_region_1106	5S
+chr11	8717576	8717619	-	rRNA_region_1107	5S
+chr11	9209231	9209274	+	rRNA_region_1108	5S
+chr11	10902879	10902921	-	rRNA_region_1109	5S
+chr11	13263923	13264095	+	rRNA_region_1110	SSU-rRNA_Hsa
+chr11	13618103	13618190	+	rRNA_region_1111	5S
+chr11	13907500	13907589	-	rRNA_region_1112	5S
+chr11	14134985	14135080	+	rRNA_region_1113	5S
+chr11	18248386	18248503	-	rRNA_region_1114	5S
+chr11	18266395	18266512	+	rRNA_region_1115	5S
+chr11	18749160	18749279	-	rRNA_region_1116	LSU-rRNA_Hsa
+chr11	19401891	19401981	-	rRNA_region_1117	5S
+chr11	21000839	21000880	-	rRNA_region_1118	5S
+chr11	21000880	21000965	-	rRNA_region_1119	5S
+chr11	21297229	21297269	-	rRNA_region_1120	5S
+chr11	21383804	21383909	-	rRNA_region_1121	5S
+chr11	22480687	22480980	+	rRNA_region_1122	LSU-rRNA_Hsa
+chr11	22688350	22688440	+	rRNA_region_1123	5S
+chr11	27107731	27107809	-	rRNA_region_1124	5S
+chr11	27521636	27521725	-	rRNA_region_1125	5S
+chr11	29031711	29031750	+	rRNA_region_1126	5S
+chr11	31599888	31599938	-	rRNA_region_1127	5S
+chr11	32164185	32164226	+	rRNA_region_1128	5S
+chr11	33264375	33264435	-	rRNA_region_1129	5S
+chr11	38763632	38763673	+	rRNA_region_1130	5S
+chr11	40261218	40261249	+	rRNA_region_1131	LSU-rRNA_Hsa
+chr11	47804291	47804401	-	rRNA_region_1132	5S
+chr11	48477871	48477946	+	rRNA_region_1133	5S
+chr11	49426159	49426209	-	rRNA_region_1134	5S
+chr11	49935747	49935823	-	rRNA_region_1135	5S
+chr11	54648777	54648852	+	rRNA_region_1136	5S
+chr11	57450182	57450269	+	rRNA_region_1137	5S
+chr11	57819652	57819696	-	rRNA_region_1138	5S
+chr11	64506488	64506542	-	rRNA_region_1139	5S
+chr11	68231575	68231970	-	rRNA_region_1140	LSU-rRNA_Hsa
+chr11	68804128	68804217	+	rRNA_region_1141	5S
+chr11	71845208	71845259	-	rRNA_region_1142	5S
+chr11	73202391	73202471	+	rRNA_region_1143	5S
+chr11	73792053	73792162	+	rRNA_region_1144	LSU-rRNA_Hsa
+chr11	74198764	74198854	-	rRNA_region_1145	5S
+chr11	75934932	75935020	+	rRNA_region_1146	5S
+chr11	76147486	76147640	+	rRNA_region_1147	LSU-rRNA_Hsa
+chr11	77886427	77886755	+	rRNA_region_1148	LSU-rRNA_Hsa
+chr11	83104910	83104993	+	rRNA_region_1149	LSU-rRNA_Hsa
+chr11	85081561	85081752	-	rRNA_region_1150	SSU-rRNA_Hsa
+chr11	85081736	85081802	-	rRNA_region_1151	SSU-rRNA_Hsa
+chr11	85483967	85484263	+	rRNA_region_1152	LSU-rRNA_Hsa
+chr11	86044279	86044577	-	rRNA_region_1153	LSU-rRNA_Hsa
+chr11	86535320	86535470	+	rRNA_region_1154	SSU-rRNA_Hsa
+chr11	88131569	88131646	+	rRNA_region_1155	5S
+chr11	89274348	89274398	+	rRNA_region_1156	5S
+chr11	94720066	94720199	+	rRNA_region_1157	LSU-rRNA_Hsa
+chr11	95524045	95524134	-	rRNA_region_1158	5S
+chr11	95840036	95840123	-	rRNA_region_1159	5S
+chr11	97657463	97657584	+	rRNA_region_1160	5S
+chr11	99349155	99349197	+	rRNA_region_1161	5S
+chr11	102057853	102057915	+	rRNA_region_1162	5S
+chr11	102057917	102057997	+	rRNA_region_1163	5S
+chr11	102399565	102399620	+	rRNA_region_1164	5S
+chr11	103408915	103409080	-	rRNA_region_1165	LSU-rRNA_Hsa
+chr11	104252582	104252649	+	rRNA_region_1166	5S
+chr11	105394960	105395002	+	rRNA_region_1167	5S
+chr11	106330976	106331018	-	rRNA_region_1168	5S
+chr11	109120875	109120986	-	rRNA_region_1169	5S
+chr11	110151418	110151460	-	rRNA_region_1170	5S
+chr11	111040119	111040208	-	rRNA_region_1171	5S
+chr11	111821183	111821353	-	rRNA_region_1172	LSU-rRNA_Hsa
+chr11	111821391	111821638	-	rRNA_region_1173	LSU-rRNA_Hsa
+chr11	111821932	111822024	-	rRNA_region_1174	LSU-rRNA_Hsa
+chr11	111928403	111928478	+	rRNA_region_1175	5S
+chr11	113427174	113427217	+	rRNA_region_1176	5S
+chr11	124636458	124636548	+	rRNA_region_1177	5S
+chr11	125153300	125153341	-	rRNA_region_1178	5S
+chr11	128734273	128734354	+	rRNA_region_1179	5S
+chr11	129289903	129289988	+	rRNA_region_1180	5S
+chr11	129408949	129409030	+	rRNA_region_1181	LSU-rRNA_Hsa
+chr12	51205	51286	-	rRNA_region_1182	5S
+chr12	9951833	9951879	+	rRNA_region_1183	5S
+chr12	11561870	11561912	+	rRNA_region_1184	5S
+chr12	12337965	12338006	-	rRNA_region_1185	5S
+chr12	13046151	13046241	+	rRNA_region_1186	5S
+chr12	13287732	13287779	-	rRNA_region_1187	5S
+chr12	13440909	13441001	-	rRNA_region_1188	5S
+chr12	17066783	17066861	-	rRNA_region_1189	5S
+chr12	17067223	17067240	-	rRNA_region_1190	5S
+chr12	18358244	18358382	-	rRNA_region_1191	LSU-rRNA_Hsa
+chr12	18358393	18358457	-	rRNA_region_1192	LSU-rRNA_Hsa
+chr12	19773210	19773369	+	rRNA_region_1193	LSU-rRNA_Hsa
+chr12	20551423	20551588	+	rRNA_region_1194	SSU-rRNA_Hsa
+chr12	26373650	26373733	-	rRNA_region_1195	5S
+chr12	27807782	27807821	-	rRNA_region_1196	5S
+chr12	28505393	28505483	+	rRNA_region_1197	5S
+chr12	30306434	30306525	-	rRNA_region_1198	5S
+chr12	30504099	30504140	+	rRNA_region_1199	5S
+chr12	30693875	30693949	+	rRNA_region_1200	5S
+chr12	30734758	30734818	-	rRNA_region_1201	SSU-rRNA_Hsa
+chr12	31434400	31434441	-	rRNA_region_1202	5S
+chr12	32511838	32511888	+	rRNA_region_1203	5S
+chr12	34203868	34203921	+	rRNA_region_1204	5S
+chr12	34205698	34205819	+	rRNA_region_1205	5S
+chr12	34219380	34219670	-	rRNA_region_1206	LSU-rRNA_Hsa
+chr12	34219672	34219806	-	rRNA_region_1207	LSU-rRNA_Hsa
+chr12	34219804	34219890	-	rRNA_region_1208	LSU-rRNA_Hsa
+chr12	38137574	38137661	+	rRNA_region_1209	LSU-rRNA_Hsa
+chr12	38137655	38138128	+	rRNA_region_1210	LSU-rRNA_Hsa
+chr12	38161463	38161582	-	rRNA_region_1211	5S
+chr12	38163400	38163515	-	rRNA_region_1212	5S
+chr12	39639338	39639405	+	rRNA_region_1213	5S
+chr12	41658679	41658765	+	rRNA_region_1214	5S
+chr12	43689167	43689222	+	rRNA_region_1215	5S
+chr12	45023618	45023668	+	rRNA_region_1216	5S
+chr12	45117771	45117889	+	rRNA_region_1217	5S
+chr12	46240981	46241023	+	rRNA_region_1218	5S
+chr12	48194457	48194525	+	rRNA_region_1219	LSU-rRNA_Hsa
+chr12	48677989	48678052	+	rRNA_region_1220	5S
+chr12	50243442	50243492	+	rRNA_region_1221	5S
+chr12	52185982	52186031	+	rRNA_region_1222	5S
+chr12	56870568	56870681	+	rRNA_region_1223	LSU-rRNA_Hsa
+chr12	56870726	56870768	+	rRNA_region_1224	5S
+chr12	60484263	60484299	-	rRNA_region_1225	LSU-rRNA_Hsa
+chr12	62394030	62394071	+	rRNA_region_1226	5S
+chr12	67372866	67373001	-	rRNA_region_1227	LSU-rRNA_Hsa
+chr12	68077585	68077670	+	rRNA_region_1228	5S
+chr12	68929058	68929130	+	rRNA_region_1229	LSU-rRNA_Hsa
+chr12	69669255	69669319	-	rRNA_region_1230	LSU-rRNA_Hsa
+chr12	71543121	71543163	-	rRNA_region_1231	5S
+chr12	71735692	71735745	-	rRNA_region_1232	5S
+chr12	71835173	71835215	-	rRNA_region_1233	5S
+chr12	74953560	74953670	-	rRNA_region_1234	LSU-rRNA_Hsa
+chr12	74953695	74953832	-	rRNA_region_1235	LSU-rRNA_Hsa
+chr12	75498064	75498304	+	rRNA_region_1236	LSU-rRNA_Hsa
+chr12	79878312	79878415	-	rRNA_region_1237	5S
+chr12	83064642	83064700	-	rRNA_region_1238	5S
+chr12	85168918	85168982	-	rRNA_region_1239	LSU-rRNA_Hsa
+chr12	86187202	86187243	+	rRNA_region_1240	5S
+chr12	88051693	88051784	+	rRNA_region_1241	5S
+chr12	88388550	88388589	-	rRNA_region_1242	5S
+chr12	89726933	89727018	+	rRNA_region_1243	5S
+chr12	90288921	90288963	-	rRNA_region_1244	5S
+chr12	91906909	91906951	+	rRNA_region_1245	5S
+chr12	94054962	94055127	+	rRNA_region_1246	LSU-rRNA_Hsa
+chr12	94056424	94056509	+	rRNA_region_1247	LSU-rRNA_Hsa
+chr12	94330467	94330553	+	rRNA_region_1248	SSU-rRNA_Hsa
+chr12	94443405	94443482	-	rRNA_region_1249	LSU-rRNA_Hsa
+chr12	97440227	97440275	-	rRNA_region_1250	5S
+chr12	98633946	98633988	-	rRNA_region_1251	5S
+chr12	99083815	99083904	-	rRNA_region_1252	5S
+chr12	101472339	101472446	+	rRNA_region_1253	5S
+chr12	101779813	101779904	+	rRNA_region_1254	5S
+chr12	101836817	101836908	+	rRNA_region_1255	5S
+chr12	101885317	101885446	-	rRNA_region_1256	LSU-rRNA_Hsa
+chr12	103926071	103926181	-	rRNA_region_1257	SSU-rRNA_Hsa
+chr12	104125235	104125325	+	rRNA_region_1258	5S
+chr12	105732660	105732702	-	rRNA_region_1259	5S
+chr12	107271319	107271394	-	rRNA_region_1260	5S
+chr12	107486545	107486635	-	rRNA_region_1261	5S
+chr12	109059985	109060073	+	rRNA_region_1262	5S
+chr12	109620234	109620331	-	rRNA_region_1263	5S
+chr12	111339526	111339611	+	rRNA_region_1264	5S
+chr12	111730325	111730385	+	rRNA_region_1265	5S
+chr12	112728563	112728628	-	rRNA_region_1266	LSU-rRNA_Hsa
+chr12	114205060	114205102	-	rRNA_region_1267	5S
+chr12	118135833	118135890	-	rRNA_region_1268	LSU-rRNA_Hsa
+chr12	118829680	118829770	+	rRNA_region_1269	5S
+chr12	123282915	123283033	-	rRNA_region_1270	5S
+chr12	127165907	127166171	-	rRNA_region_1271	LSU-rRNA_Hsa
+chr12	127166337	127166442	-	rRNA_region_1272	LSU-rRNA_Hsa
+chr12	131299660	131299751	-	rRNA_region_1273	5S
+chr12	131661062	131661153	+	rRNA_region_1274	5S
+chr12	131801313	131801426	-	rRNA_region_1275	5S
+chr12	132723943	132724056	-	rRNA_region_1276	5S
+chr12	133047540	133047625	-	rRNA_region_1277	5S
+chr13	19088483	19088575	+	rRNA_region_1278	5S
+chr13	21346015	21346057	+	rRNA_region_1279	5S
+chr13	21369810	21369897	-	rRNA_region_1280	5S
+chr13	21466889	21466930	+	rRNA_region_1281	5S
+chr13	27535564	27535606	+	rRNA_region_1282	5S
+chr13	28144612	28144651	-	rRNA_region_1283	5S
+chr13	31800624	31800662	+	rRNA_region_1284	5S
+chr13	34803974	34804023	-	rRNA_region_1285	SSU-rRNA_Hsa
+chr13	36798292	36798374	-	rRNA_region_1286	5S
+chr13	36864381	36864456	-	rRNA_region_1287	5S
+chr13	37854880	37854970	-	rRNA_region_1288	5S
+chr13	42835667	42835709	+	rRNA_region_1289	5S
+chr13	45551481	45551602	-	rRNA_region_1290	5S
+chr13	48764891	48764980	+	rRNA_region_1291	5S
+chr13	50812986	50813106	-	rRNA_region_1292	5S
+chr13	51027764	51027851	-	rRNA_region_1293	5S
+chr13	53791204	53791320	-	rRNA_region_1294	5S
+chr13	54022324	54022390	-	rRNA_region_1295	LSU-rRNA_Hsa
+chr13	57991349	57991439	+	rRNA_region_1296	5S
+chr13	60613607	60613697	+	rRNA_region_1297	5S
+chr13	62768908	62768986	+	rRNA_region_1298	5S
+chr13	67634480	67634569	+	rRNA_region_1299	LSU-rRNA_Hsa
+chr13	68391738	68391829	+	rRNA_region_1300	LSU-rRNA_Hsa
+chr13	70024081	70024130	-	rRNA_region_1301	5S
+chr13	71978093	71978208	+	rRNA_region_1302	5S
+chr13	75563962	75564052	-	rRNA_region_1303	5S
+chr13	79389541	79389630	-	rRNA_region_1304	5S
+chr13	80080956	80080998	-	rRNA_region_1305	5S
+chr13	84683567	84683678	+	rRNA_region_1306	LSU-rRNA_Hsa
+chr13	85894028	85894068	-	rRNA_region_1307	5S
+chr13	90135745	90135840	-	rRNA_region_1308	5S
+chr13	92304969	92305009	-	rRNA_region_1309	5S
+chr13	93970012	93970054	+	rRNA_region_1310	5S
+chr13	94025508	94025598	-	rRNA_region_1311	5S
+chr13	94634246	94634339	-	rRNA_region_1312	LSU-rRNA_Hsa
+chr13	94651396	94651511	-	rRNA_region_1313	5S
+chr13	96080237	96080327	-	rRNA_region_1314	5S
+chr13	97363011	97363101	-	rRNA_region_1315	5S
+chr13	97707808	97707850	+	rRNA_region_1316	5S
+chr13	101658760	101658871	+	rRNA_region_1317	LSU-rRNA_Hsa
+chr13	102408586	102408628	+	rRNA_region_1318	5S
+chr13	104197767	104197850	-	rRNA_region_1319	LSU-rRNA_Hsa
+chr13	104546917	104546961	+	rRNA_region_1320	5S
+chr13	105039234	105039277	+	rRNA_region_1321	5S
+chr13	106155400	106155490	-	rRNA_region_1322	5S
+chr13	108301239	108301327	-	rRNA_region_1323	5S
+chr13	112944335	112944555	-	rRNA_region_1324	SSU-rRNA_Hsa
+chr14	16054577	16056431	+	rRNA_region_1325	SSU-rRNA_Hsa
+chr14	20090129	20090209	+	rRNA_region_1326	5S
+chr14	20146063	20146155	-	rRNA_region_1327	5S
+chr14	20414986	20415076	+	rRNA_region_1328	5S
+chr14	21601779	21601868	-	rRNA_region_1329	5S
+chr14	21729973	21730039	-	rRNA_region_1330	LSU-rRNA_Hsa
+chr14	23517748	23517886	-	rRNA_region_1331	LSU-rRNA_Hsa
+chr14	24158602	24158724	+	rRNA_region_1332	5S
+chr14	33081143	33081186	-	rRNA_region_1333	5S
+chr14	43253792	43253842	+	rRNA_region_1334	LSU-rRNA_Hsa
+chr14	45017218	45017344	+	rRNA_region_1335	LSU-rRNA_Hsa
+chr14	49011209	49011275	+	rRNA_region_1336	LSU-rRNA_Hsa
+chr14	49087712	49087754	+	rRNA_region_1337	5S
+chr14	49552632	49552719	+	rRNA_region_1338	5S
+chr14	51692751	51692842	+	rRNA_region_1339	5S
+chr14	54720718	54720781	-	rRNA_region_1340	LSU-rRNA_Hsa
+chr14	54956656	54956711	+	rRNA_region_1341	LSU-rRNA_Hsa
+chr14	56212555	56212695	-	rRNA_region_1342	LSU-rRNA_Hsa
+chr14	60622318	60622431	-	rRNA_region_1343	LSU-rRNA_Hsa
+chr14	67260226	67260314	+	rRNA_region_1344	5S
+chr14	67657102	67657209	-	rRNA_region_1345	5S
+chr14	70067383	70067473	-	rRNA_region_1346	5S
+chr14	72217940	72218038	+	rRNA_region_1347	LSU-rRNA_Hsa
+chr14	73001459	73001501	+	rRNA_region_1348	5S
+chr14	75352884	75352924	-	rRNA_region_1349	5S
+chr14	75604172	75604262	+	rRNA_region_1350	5S
+chr14	76063216	76063258	+	rRNA_region_1351	5S
+chr14	77403904	77403993	-	rRNA_region_1352	5S
+chr14	78177832	78177921	-	rRNA_region_1353	5S
+chr14	80581238	80581257	+	rRNA_region_1354	5S
+chr14	88130285	88130506	+	rRNA_region_1355	LSU-rRNA_Hsa
+chr14	88130556	88130829	+	rRNA_region_1356	LSU-rRNA_Hsa
+chr14	89522233	89522277	-	rRNA_region_1357	5S
+chr14	89875026	89875229	-	rRNA_region_1358	SSU-rRNA_Hsa
+chr14	90351037	90351100	+	rRNA_region_1359	5S
+chr14	91270689	91270730	+	rRNA_region_1360	SSU-rRNA_Hsa
+chr14	91803888	91803972	-	rRNA_region_1361	5S
+chr14	92164493	92164535	-	rRNA_region_1362	5S
+chr14	96828557	96828599	+	rRNA_region_1363	5S
+chr14	99582442	99582484	+	rRNA_region_1364	5S
+chr14	103316946	103317036	-	rRNA_region_1365	5S
+chr14	105123743	105123785	-	rRNA_region_1366	5S
+chr14	106636671	106636761	+	rRNA_region_1367	5S
+chr15	20261165	20261206	+	rRNA_region_1368	5S
+chr15	23597280	23597331	-	rRNA_region_1369	5S
+chr15	25738508	25738588	+	rRNA_region_1370	5S
+chr15	27280316	27280435	-	rRNA_region_1371	5S
+chr15	27752093	27752398	+	rRNA_region_1372	LSU-rRNA_Hsa
+chr15	34047874	34047918	-	rRNA_region_1373	LSU-rRNA_Hsa
+chr15	35468364	35468453	+	rRNA_region_1374	SSU-rRNA_Hsa
+chr15	40331571	40331648	-	rRNA_region_1375	5S
+chr15	41851940	41852029	-	rRNA_region_1376	5S
+chr15	44715781	44715824	+	rRNA_region_1377	5S
+chr15	45553518	45553604	-	rRNA_region_1378	5S
+chr15	46074609	46074726	-	rRNA_region_1379	LSU-rRNA_Hsa
+chr15	46074869	46075119	-	rRNA_region_1380	LSU-rRNA_Hsa
+chr15	46075331	46075412	-	rRNA_region_1381	LSU-rRNA_Hsa
+chr15	46076006	46076140	-	rRNA_region_1382	LSU-rRNA_Hsa
+chr15	46076327	46076508	-	rRNA_region_1383	LSU-rRNA_Hsa
+chr15	49982442	49982562	+	rRNA_region_1384	5S
+chr15	50463380	50463458	+	rRNA_region_1385	5S
+chr15	55286107	55286196	+	rRNA_region_1386	5S
+chr15	55363555	55363645	+	rRNA_region_1387	5S
+chr15	55658122	55658164	-	rRNA_region_1388	5S
+chr15	56432697	56432770	-	rRNA_region_1389	5S
+chr15	57394665	57394744	-	rRNA_region_1390	5S
+chr15	58911445	58911553	+	rRNA_region_1391	SSU-rRNA_Hsa
+chr15	59324346	59324442	+	rRNA_region_1392	LSU-rRNA_Hsa
+chr15	59574101	59574222	-	rRNA_region_1393	5S
+chr15	60736769	60736858	+	rRNA_region_1394	5S
+chr15	61585346	61585386	-	rRNA_region_1395	5S
+chr15	62685354	62685395	+	rRNA_region_1396	5S
+chr15	63428497	63428536	+	rRNA_region_1397	5S
+chr15	64390913	64390955	-	rRNA_region_1398	SSU-rRNA_Hsa
+chr15	68666859	68666899	-	rRNA_region_1399	5S
+chr15	69367584	69367673	+	rRNA_region_1400	5S
+chr15	71858569	71858667	+	rRNA_region_1401	5S
+chr15	78399071	78399113	+	rRNA_region_1402	5S
+chr15	79497193	79497232	+	rRNA_region_1403	5S
+chr15	82590437	82590479	-	rRNA_region_1404	5S
+chr15	86138277	86138342	-	rRNA_region_1405	5S
+chr15	89762639	89762740	+	rRNA_region_1406	5S
+chr15	93420280	93420340	-	rRNA_region_1407	5S
+chr15	95808757	95808804	+	rRNA_region_1408	5S
+chr15	100074100	100074188	-	rRNA_region_1409	5S
+chr15	101271056	101271133	-	rRNA_region_1410	LSU-rRNA_Hsa
+chr16	9564408	9564497	-	rRNA_region_1411	5S
+chr16	9600088	9600184	+	rRNA_region_1412	5S
+chr16	11913815	11913854	+	rRNA_region_1413	5S
+chr16	13064383	13064419	-	rRNA_region_1414	5S
+chr16	14835386	14835416	-	rRNA_region_1415	5S
+chr16	15626449	15626524	+	rRNA_region_1416	5S
+chr16	16234202	16234232	-	rRNA_region_1417	5S
+chr16	17164338	17164388	-	rRNA_region_1418	5S
+chr16	18009728	18009770	-	rRNA_region_1419	5S
+chr16	18560465	18560495	+	rRNA_region_1420	5S
+chr16	19063158	19063198	+	rRNA_region_1421	5S
+chr16	21038498	21038540	-	rRNA_region_1422	5S
+chr16	23432352	23432498	+	rRNA_region_1423	LSU-rRNA_Hsa
+chr16	23749940	23750028	-	rRNA_region_1424	SSU-rRNA_Hsa
+chr16	24412873	24412944	+	rRNA_region_1425	LSU-rRNA_Hsa
+chr16	26028911	26029001	+	rRNA_region_1426	5S
+chr16	28162145	28162212	+	rRNA_region_1427	LSU-rRNA_Hsa
+chr16	29315804	29315849	+	rRNA_region_1428	5S
+chr16	29929955	29930140	-	rRNA_region_1429	SSU-rRNA_Hsa
+chr16	33589663	33589704	-	rRNA_region_1430	5S
+chr16	34160029	34161894	+	rRNA_region_1431	SSU-rRNA_Hsa
+chr16	35133799	35133838	+	rRNA_region_1432	5S
+chr16	35734146	35734250	+	rRNA_region_1433	5S
+chr16	35734406	35734503	+	rRNA_region_1434	5S
+chr16	35734647	35734750	+	rRNA_region_1435	5S
+chr16	35734908	35734984	+	rRNA_region_1436	5S
+chr16	35735133	35735237	+	rRNA_region_1437	5S
+chr16	35735379	35735483	+	rRNA_region_1438	5S
+chr16	35735630	35735735	+	rRNA_region_1439	5S
+chr16	35735891	35735986	+	rRNA_region_1440	5S
+chr16	35736158	35736231	+	rRNA_region_1441	5S
+chr16	35745769	35745847	+	rRNA_region_1442	5S
+chr16	35745995	35746099	+	rRNA_region_1443	5S
+chr16	35746293	35746371	+	rRNA_region_1444	5S
+chr16	35746543	35746646	+	rRNA_region_1445	5S
+chr16	35746821	35746896	+	rRNA_region_1446	5S
+chr16	35747038	35747142	+	rRNA_region_1447	5S
+chr16	35747339	35747404	+	rRNA_region_1448	5S
+chr16	35747563	35747641	+	rRNA_region_1449	5S
+chr16	35747779	35747883	+	rRNA_region_1450	5S
+chr16	35748059	35748139	+	rRNA_region_1451	5S
+chr16	35748320	35748395	+	rRNA_region_1452	5S
+chr16	35748579	35748657	+	rRNA_region_1453	5S
+chr16	35748803	35748907	+	rRNA_region_1454	5S
+chr16	35749054	35749158	+	rRNA_region_1455	5S
+chr16	35749315	35749409	+	rRNA_region_1456	5S
+chr16	35749560	35749663	+	rRNA_region_1457	5S
+chr16	35749812	35749915	+	rRNA_region_1458	5S
+chr16	35750067	35750170	+	rRNA_region_1459	5S
+chr16	35750348	35750421	+	rRNA_region_1460	5S
+chr16	35750596	35750674	+	rRNA_region_1461	5S
+chr16	35750844	35750924	+	rRNA_region_1462	5S
+chr16	35751098	35751173	+	rRNA_region_1463	5S
+chr16	35751366	35751436	+	rRNA_region_1464	5S
+chr16	35751604	35751686	+	rRNA_region_1465	5S
+chr16	35751860	35751937	+	rRNA_region_1466	5S
+chr16	35752085	35752188	+	rRNA_region_1467	5S
+chr16	35752358	35752438	+	rRNA_region_1468	5S
+chr16	35752608	35752686	+	rRNA_region_1469	5S
+chr16	35752857	35752937	+	rRNA_region_1470	5S
+chr16	35753577	35753680	+	rRNA_region_1471	5S
+chr16	35753828	35753932	+	rRNA_region_1472	5S
+chr16	35754081	35754184	+	rRNA_region_1473	5S
+chr16	35754332	35754436	+	rRNA_region_1474	5S
+chr16	35754615	35754690	+	rRNA_region_1475	5S
+chr16	35754959	35755031	+	rRNA_region_1476	5S
+chr16	35755201	35755287	+	rRNA_region_1477	5S
+chr16	47450365	47450461	-	rRNA_region_1478	5S
+chr16	47485561	47485607	+	rRNA_region_1479	LSU-rRNA_Hsa
+chr16	47504727	47505386	+	rRNA_region_1480	LSU-rRNA_Hsa
+chr16	47505431	47505519	+	rRNA_region_1481	5S
+chr16	48900447	48900489	-	rRNA_region_1482	5S
+chr16	50125879	50125941	-	rRNA_region_1483	LSU-rRNA_Hsa
+chr16	50869453	50869567	-	rRNA_region_1484	5S
+chr16	53337452	53337572	+	rRNA_region_1485	5S
+chr16	55724723	55724921	+	rRNA_region_1486	LSU-rRNA_Hsa
+chr16	55755904	55756062	+	rRNA_region_1487	LSU-rRNA_Hsa
+chr16	55837553	55837738	-	rRNA_region_1488	LSU-rRNA_Hsa
+chr16	55841455	55841743	+	rRNA_region_1489	LSU-rRNA_Hsa
+chr16	57805631	57805673	-	rRNA_region_1490	5S
+chr16	58167377	58167418	-	rRNA_region_1491	5S
+chr16	59494249	59494291	+	rRNA_region_1492	5S
+chr16	59731354	59731443	+	rRNA_region_1493	5S
+chr16	66301808	66301898	+	rRNA_region_1494	5S
+chr16	68742478	68742573	+	rRNA_region_1495	5S
+chr16	68937825	68937864	-	rRNA_region_1496	5S
+chr16	69502914	69502953	+	rRNA_region_1497	5S
+chr16	69503243	69503310	+	rRNA_region_1498	5S
+chr16	73704088	73704130	-	rRNA_region_1499	5S
+chr16	75861045	75861157	-	rRNA_region_1500	5S
+chr16	76744990	76745026	-	rRNA_region_1501	5S
+chr16	79264453	79264545	+	rRNA_region_1502	5S
+chr16	80354823	80354865	+	rRNA_region_1503	5S
+chr16	81868387	81868711	-	rRNA_region_1504	LSU-rRNA_Hsa
+chr16	84039945	84040036	-	rRNA_region_1505	5S
+chr16	84262836	84262928	-	rRNA_region_1506	5S
+chr16	88022308	88022353	+	rRNA_region_1507	5S
+chr17	2188944	2188986	+	rRNA_region_1508	5S
+chr17	4056804	4056874	-	rRNA_region_1509	5S
+chr17	6600961	6601051	-	rRNA_region_1510	5S
+chr17	6987464	6987558	+	rRNA_region_1511	5S
+chr17	9941838	9941880	+	rRNA_region_1512	5S
+chr17	10886298	10886383	-	rRNA_region_1513	5S
+chr17	15708036	15708077	+	rRNA_region_1514	LSU-rRNA_Hsa
+chr17	15782341	15782415	+	rRNA_region_1515	5S
+chr17	19452225	19452783	+	rRNA_region_1516	LSU-rRNA_Hsa
+chr17	19453359	19453434	+	rRNA_region_1517	LSU-rRNA_Hsa
+chr17	19453439	19453537	+	rRNA_region_1518	LSU-rRNA_Hsa
+chr17	19453623	19453784	+	rRNA_region_1519	LSU-rRNA_Hsa
+chr17	19600859	19600958	+	rRNA_region_1520	LSU-rRNA_Hsa
+chr17	19601262	19601345	+	rRNA_region_1521	LSU-rRNA_Hsa
+chr17	19997693	19997776	+	rRNA_region_1522	5S
+chr17	22524018	22524174	+	rRNA_region_1523	LSU-rRNA_Hsa
+chr17	30582239	30582322	+	rRNA_region_1524	5S
+chr17	31279310	31279352	+	rRNA_region_1525	5S
+chr17	31963853	31963933	-	rRNA_region_1526	5S
+chr17	32592094	32592219	-	rRNA_region_1527	LSU-rRNA_Hsa
+chr17	34120080	34120168	-	rRNA_region_1528	5S
+chr17	34493380	34493513	+	rRNA_region_1529	LSU-rRNA_Hsa
+chr17	35151095	35151256	-	rRNA_region_1530	LSU-rRNA_Hsa
+chr17	35151255	35151353	-	rRNA_region_1531	LSU-rRNA_Hsa
+chr17	36340137	36340186	-	rRNA_region_1532	5S
+chr17	36491231	36491322	-	rRNA_region_1533	5S
+chr17	37940741	37940790	-	rRNA_region_1534	5S
+chr17	38020281	38020330	-	rRNA_region_1535	5S
+chr17	38144238	38144287	-	rRNA_region_1536	5S
+chr17	38731799	38731920	-	rRNA_region_1537	5S
+chr17	40227389	40227456	+	rRNA_region_1538	LSU-rRNA_Hsa
+chr17	40374089	40374157	+	rRNA_region_1539	5S
+chr17	41718153	41718243	+	rRNA_region_1540	5S
+chr17	44596240	44596279	+	rRNA_region_1541	LSU-rRNA_Hsa
+chr17	45327407	45327497	-	rRNA_region_1542	5S
+chr17	45557654	45557696	-	rRNA_region_1543	5S
+chr17	45940281	45940323	+	rRNA_region_1544	5S
+chr17	46505352	46505394	+	rRNA_region_1545	5S
+chr17	49616071	49616113	+	rRNA_region_1546	5S
+chr17	52902105	52902145	+	rRNA_region_1547	5S
+chr17	54979584	54979626	+	rRNA_region_1548	5S
+chr17	57291841	57291883	+	rRNA_region_1549	5S
+chr17	57791257	57791391	-	rRNA_region_1550	LSU-rRNA_Hsa
+chr17	58726740	58726781	-	rRNA_region_1551	5S
+chr17	58930028	58930070	+	rRNA_region_1552	5S
+chr17	60002711	60002760	+	rRNA_region_1553	5S
+chr17	60040029	60040114	+	rRNA_region_1554	LSU-rRNA_Hsa
+chr17	60040323	60040368	+	rRNA_region_1555	LSU-rRNA_Hsa
+chr17	60040380	60040468	-	rRNA_region_1556	LSU-rRNA_Hsa
+chr17	60380215	60380264	+	rRNA_region_1557	5S
+chr17	62425170	62425262	-	rRNA_region_1558	LSU-rRNA_Hsa
+chr17	63629507	63629563	+	rRNA_region_1559	LSU-rRNA_Hsa
+chr17	64029487	64029524	+	rRNA_region_1560	5S
+chr17	64904565	64904607	-	rRNA_region_1561	5S
+chr17	66267742	66267831	+	rRNA_region_1562	5S
+chr17	66639268	66639347	+	rRNA_region_1563	5S
+chr17	66895492	66895570	+	rRNA_region_1564	5S
+chr17	67268109	67268229	+	rRNA_region_1565	5S
+chr17	71007013	71007081	-	rRNA_region_1566	5S
+chr17	73187524	73187574	-	rRNA_region_1567	LSU-rRNA_Hsa
+chr17	74417613	74417704	-	rRNA_region_1568	5S
+chr17	77161949	77162307	-	rRNA_region_1569	LSU-rRNA_Hsa
+chr18	9844759	9844829	-	rRNA_region_1570	5S
+chr18	9923918	9924002	+	rRNA_region_1571	5S
+chr18	13407510	13407555	+	rRNA_region_1572	5S
+chr18	21928987	21929094	-	rRNA_region_1573	5S
+chr18	22276833	22276898	-	rRNA_region_1574	LSU-rRNA_Hsa
+chr18	22292285	22292327	-	rRNA_region_1575	5S
+chr18	22643498	22643541	+	rRNA_region_1576	5S
+chr18	23611709	23611863	+	rRNA_region_1577	LSU-rRNA_Hsa
+chr18	24170502	24170623	-	rRNA_region_1578	5S
+chr18	24288919	24288992	+	rRNA_region_1579	5S
+chr18	32176047	32176167	-	rRNA_region_1580	5S
+chr18	38950286	38950394	-	rRNA_region_1581	LSU-rRNA_Hsa
+chr18	42270588	42270678	+	rRNA_region_1582	5S
+chr18	44071582	44071702	+	rRNA_region_1583	5S
+chr18	45936403	45936445	+	rRNA_region_1584	LSU-rRNA_Hsa
+chr18	48475512	48475600	-	rRNA_region_1585	5S
+chr18	48732948	48732991	-	rRNA_region_1586	5S
+chr18	49946300	49946388	-	rRNA_region_1587	5S
+chr18	49953065	49953103	-	rRNA_region_1588	5S
+chr18	50319003	50319096	+	rRNA_region_1589	5S
+chr18	50761587	50761762	-	rRNA_region_1590	LSU-rRNA_Hsa
+chr18	55146564	55146645	-	rRNA_region_1591	5S
+chr18	56793148	56793190	+	rRNA_region_1592	5S
+chr18	59712721	59712762	-	rRNA_region_1593	5S
+chr18	61048702	61048788	-	rRNA_region_1594	LSU-rRNA_Hsa
+chr18	65475512	65475600	+	rRNA_region_1595	5S
+chr18	65544923	65544965	-	rRNA_region_1596	5S
+chr18	69671963	69672005	+	rRNA_region_1597	5S
+chr18	72751995	72752050	+	rRNA_region_1598	5S
+chr18	74494831	74494874	+	rRNA_region_1599	5S
+chr18	74577164	74577423	-	rRNA_region_1600	LSU-rRNA_Hsa
+chr18	74577841	74577882	+	rRNA_region_1601	5S
+chr18	77863487	77863567	-	rRNA_region_1602	5S
+chr18	80012846	80013065	+	rRNA_region_1603	LSU-rRNA_Hsa
+chr19	453135	453224	+	rRNA_region_1604	5S
+chr19	7886975	7887095	-	rRNA_region_1605	5S
+chr19	10667731	10667885	+	rRNA_region_1606	LSU-rRNA_Hsa
+chr19	11996814	11996918	+	rRNA_region_1607	5S
+chr19	12027911	12028021	-	rRNA_region_1608	5S
+chr19	12070169	12070272	+	rRNA_region_1609	5S
+chr19	12106499	12106616	+	rRNA_region_1610	5S
+chr19	12151105	12151187	-	rRNA_region_1611	5S
+chr19	17972025	17972072	+	rRNA_region_1612	5S
+chr19	19707883	19707958	+	rRNA_region_1613	5S
+chr19	21113125	21113235	-	rRNA_region_1614	5S
+chr19	22694812	22694856	-	rRNA_region_1615	SSU-rRNA_Hsa
+chr19	22694852	22694894	-	rRNA_region_1616	SSU-rRNA_Hsa
+chr19	23999596	23999763	-	rRNA_region_1617	LSU-rRNA_Hsa
+chr19	23999833	24000000	-	rRNA_region_1618	LSU-rRNA_Hsa
+chr19	24000004	24000666	-	rRNA_region_1619	LSU-rRNA_Hsa
+chr19	24000657	24001448	-	rRNA_region_1620	LSU-rRNA_Hsa
+chr19	24001439	24002381	-	rRNA_region_1621	LSU-rRNA_Hsa
+chr19	24002399	24003408	-	rRNA_region_1622	LSU-rRNA_Hsa
+chr19	29001666	29001756	+	rRNA_region_1623	5S
+chr19	31655393	31655461	-	rRNA_region_1624	5S
+chr19	32243962	32244073	-	rRNA_region_1625	5S
+chr19	33011026	33011067	+	rRNA_region_1626	5S
+chr19	34016877	34016919	-	rRNA_region_1627	5S
+chr19	34137300	34137342	-	rRNA_region_1628	5S
+chr19	34652543	34652585	-	rRNA_region_1629	5S
+chr19	35575603	35575773	+	rRNA_region_1630	LSU-rRNA_Hsa
+chr19	35575788	35575847	+	rRNA_region_1631	LSU-rRNA_Hsa
+chr19	41563619	41563820	-	rRNA_region_1632	LSU-rRNA_Hsa
+chr19	41563831	41564324	-	rRNA_region_1633	LSU-rRNA_Hsa
+chr19	41564372	41564466	-	rRNA_region_1634	LSU-rRNA_Hsa
+chr19	41564494	41564943	-	rRNA_region_1635	LSU-rRNA_Hsa
+chr19	41565364	41565537	-	rRNA_region_1636	LSU-rRNA_Hsa
+chr19	43406153	43406926	+	rRNA_region_1637	LSU-rRNA_Hsa
+chr19	43407096	43407202	+	rRNA_region_1638	LSU-rRNA_Hsa
+chr19	43407513	43408015	+	rRNA_region_1639	LSU-rRNA_Hsa
+chr19	43821895	43821936	+	rRNA_region_1640	5S
+chr19	46232354	46232857	-	rRNA_region_1641	LSU-rRNA_Hsa
+chr19	47008721	47008762	-	rRNA_region_1642	5S
+chr19	48656789	48656879	-	rRNA_region_1643	5S
+chr19	51150947	51150991	-	rRNA_region_1644	5S
+chr19	51783609	51783669	+	rRNA_region_1645	LSU-rRNA_Hsa
+chr19	51830520	51830573	+	rRNA_region_1646	LSU-rRNA_Hsa
+chr19	52068258	52068348	+	rRNA_region_1647	5S
+chr19	52117757	52117837	+	rRNA_region_1648	5S
+chr19	53624886	53624930	-	rRNA_region_1649	5S
+chr19	53654969	53655148	-	rRNA_region_1650	LSU-rRNA_Hsa
+chr19	57581764	57581897	-	rRNA_region_1651	LSU-rRNA_Hsa
+chr19	57867262	57867352	+	rRNA_region_1652	5S
+chr19	58363497	58363572	+	rRNA_region_1653	5S
+chr20	5098386	5098475	-	rRNA_region_1654	5S
+chr20	15280783	15280867	-	rRNA_region_1655	5S
+chr20	15952874	15952924	+	rRNA_region_1656	5S
+chr20	17489012	17489438	+	rRNA_region_1657	LSU-rRNA_Hsa
+chr20	18433841	18433929	+	rRNA_region_1658	5S
+chr20	18715492	18715535	-	rRNA_region_1659	5S
+chr20	21138950	21139072	-	rRNA_region_1660	5S
+chr20	21484587	21484678	-	rRNA_region_1661	5S
+chr20	22785198	22785240	-	rRNA_region_1662	5S
+chr20	23160855	23160964	-	rRNA_region_1663	5S
+chr20	23380894	23381012	-	rRNA_region_1664	5S
+chr20	23965697	23965748	-	rRNA_region_1665	5S
+chr20	29298297	29300157	-	rRNA_region_1666	SSU-rRNA_Hsa
+chr20	29874058	29874179	+	rRNA_region_1667	5S
+chr20	30486121	30487974	-	rRNA_region_1668	SSU-rRNA_Hsa
+chr20	30511698	30513100	-	rRNA_region_1669	LSU-rRNA_Hsa
+chr20	30513134	30513341	-	rRNA_region_1670	LSU-rRNA_Hsa
+chr20	30513415	30514664	-	rRNA_region_1671	LSU-rRNA_Hsa
+chr20	30816153	30816274	-	rRNA_region_1672	5S
+chr20	31356869	31356958	+	rRNA_region_1673	5S
+chr20	32008375	32008437	+	rRNA_region_1674	5S
+chr20	32050587	32050705	+	rRNA_region_1675	5S
+chr20	32365412	32365455	-	rRNA_region_1676	5S
+chr20	33842263	33842311	-	rRNA_region_1677	5S
+chr20	35195305	35195423	+	rRNA_region_1678	5S
+chr20	40854138	40854229	-	rRNA_region_1679	5S
+chr20	42539387	42539427	+	rRNA_region_1680	5S
+chr20	45559755	45559872	-	rRNA_region_1681	5S
+chr20	46484134	46484240	-	rRNA_region_1682	LSU-rRNA_Hsa
+chr20	47873196	47873253	+	rRNA_region_1683	5S
+chr20	50804614	50804656	-	rRNA_region_1684	5S
+chr20	56205081	56205173	-	rRNA_region_1685	5S
+chr21	8195671	8195714	+	rRNA_region_1686	LSU-rRNA_Hsa
+chr21	8196021	8196107	+	rRNA_region_1687	LSU-rRNA_Hsa
+chr21	8196105	8196636	+	rRNA_region_1688	LSU-rRNA_Hsa
+chr21	8199657	8199696	+	rRNA_region_1689	LSU-rRNA_Hsa
+chr21	8209630	8211499	+	rRNA_region_1690	SSU-rRNA_Hsa
+chr21	8213887	8214734	+	rRNA_region_1691	LSU-rRNA_Hsa
+chr21	8214772	8218941	+	rRNA_region_1692	LSU-rRNA_Hsa
+chr21	8253841	8255704	+	rRNA_region_1693	SSU-rRNA_Hsa
+chr21	8258108	8258957	+	rRNA_region_1694	LSU-rRNA_Hsa
+chr21	8259001	8260971	+	rRNA_region_1695	LSU-rRNA_Hsa
+chr21	8378716	8378759	+	rRNA_region_1696	LSU-rRNA_Hsa
+chr21	8379066	8379152	+	rRNA_region_1697	LSU-rRNA_Hsa
+chr21	8379150	8379681	+	rRNA_region_1698	LSU-rRNA_Hsa
+chr21	8382702	8382741	+	rRNA_region_1699	LSU-rRNA_Hsa
+chr21	8392665	8394534	+	rRNA_region_1700	SSU-rRNA_Hsa
+chr21	8396925	8397768	+	rRNA_region_1701	LSU-rRNA_Hsa
+chr21	8397806	8401980	+	rRNA_region_1702	LSU-rRNA_Hsa
+chr21	8436875	8438744	+	rRNA_region_1703	SSU-rRNA_Hsa
+chr21	8441145	8441992	+	rRNA_region_1704	LSU-rRNA_Hsa
+chr21	8442036	8446211	+	rRNA_region_1705	LSU-rRNA_Hsa
+chr21	8988171	8988748	+	rRNA_region_1706	SSU-rRNA_Hsa
+chr21	13315691	13315728	+	rRNA_region_1707	5S
+chr21	14070870	14070988	+	rRNA_region_1708	5S
+chr21	14084651	14085179	-	rRNA_region_1709	LSU-rRNA_Hsa
+chr21	14085177	14085264	-	rRNA_region_1710	LSU-rRNA_Hsa
+chr21	18002470	18002605	-	rRNA_region_1711	LSU-rRNA_Hsa
+chr21	19054268	19054309	+	rRNA_region_1712	5S
+chr21	25106740	25106781	+	rRNA_region_1713	5S
+chr21	25202206	25202296	+	rRNA_region_1714	5S
+chr21	25855747	25855836	+	rRNA_region_1715	SSU-rRNA_Hsa
+chr21	29208065	29208107	-	rRNA_region_1716	5S
+chr21	32483859	32483905	-	rRNA_region_1717	5S
+chr21	32563077	32563164	+	rRNA_region_1718	5S
+chr21	32907289	32907390	+	rRNA_region_1719	LSU-rRNA_Hsa
+chr21	35639938	35639979	+	rRNA_region_1720	5S
+chr21	36851910	36852029	+	rRNA_region_1721	5S
+chr21	37264043	37264111	+	rRNA_region_1722	LSU-rRNA_Hsa
+chr21	37629079	37629121	-	rRNA_region_1723	5S
+chr21	37822278	37822321	+	rRNA_region_1724	5S
+chr21	39928163	39928204	+	rRNA_region_1725	5S
+chr21	42221176	42221287	+	rRNA_region_1726	5S
+chr21	43708243	43708306	-	rRNA_region_1727	LSU-rRNA_Hsa
+chr22	11250999	11252848	-	rRNA_region_1728	SSU-rRNA_Hsa
+chr22	11629545	11631288	+	rRNA_region_1729	SSU-rRNA_Hsa
+chr22	17623078	17623138	-	rRNA_region_1730	LSU-rRNA_Hsa
+chr22	20911103	20911237	+	rRNA_region_1731	LSU-rRNA_Hsa
+chr22	21792439	21792521	+	rRNA_region_1732	5S
+chr22	21856255	21856362	+	rRNA_region_1733	LSU-rRNA_Hsa
+chr22	21856381	21856567	+	rRNA_region_1734	LSU-rRNA_Hsa
+chr22	23127689	23127731	-	rRNA_region_1735	5S
+chr22	23355779	23355954	+	rRNA_region_1736	LSU-rRNA_Hsa
+chr22	23415412	23415512	+	rRNA_region_1737	5S
+chr22	23911441	23911522	-	rRNA_region_1738	5S
+chr22	25119296	25119345	+	rRNA_region_1739	5S
+chr22	25715078	25715169	-	rRNA_region_1740	5S
+chr22	26390654	26390782	-	rRNA_region_1741	5S
+chr22	29939688	29939730	-	rRNA_region_1742	5S
+chr22	31305403	31305493	+	rRNA_region_1743	5S
+chr22	32635109	32635198	-	rRNA_region_1744	5S
+chr22	33420284	33420326	-	rRNA_region_1745	5S
+chr22	36316969	36317008	+	rRNA_region_1746	5S
+chr22	36317022	36317061	+	rRNA_region_1747	5S
+chr22	36317075	36317114	+	rRNA_region_1748	5S
+chr22	39248728	39248826	+	rRNA_region_1749	5S
+chr22	40647643	40647685	+	rRNA_region_1750	5S
+chr22	42134227	42134279	-	rRNA_region_1751	5S
+chrUn_GL000220v1	95180	95223	+	rRNA_region_1752	LSU-rRNA_Hsa
+chrUn_GL000220v1	95530	95616	+	rRNA_region_1753	LSU-rRNA_Hsa
+chrUn_GL000220v1	95614	96145	+	rRNA_region_1754	LSU-rRNA_Hsa
+chrUn_GL000220v1	99158	99197	+	rRNA_region_1755	LSU-rRNA_Hsa
+chrUn_GL000220v1	109077	110946	+	rRNA_region_1756	SSU-rRNA_Hsa
+chrUn_GL000220v1	113347	114194	+	rRNA_region_1757	LSU-rRNA_Hsa
+chrUn_GL000220v1	114238	118417	+	rRNA_region_1758	LSU-rRNA_Hsa
+chrUn_GL000220v1	153049	154918	+	rRNA_region_1759	SSU-rRNA_Hsa
+chrUn_GL000220v1	157319	158166	+	rRNA_region_1760	LSU-rRNA_Hsa
+chrUn_GL000220v1	158210	161802	+	rRNA_region_1761	LSU-rRNA_Hsa
+chrUn_KI270442v1	218459	220324	-	rRNA_region_1762	SSU-rRNA_Hsa
+chrUn_KI270442v1	380607	380728	+	rRNA_region_1763	5S
+chr3_KI270778v1_alt	212904	212966	-	rRNA_region_1764	5S
+chr4_GL383528v1_alt	344695	344748	-	rRNA_region_1765	5S
+chr4_KI270790v1_alt	204371	204407	+	rRNA_region_1766	5S
+chr4_KI270896v1_alt	352668	352788	+	rRNA_region_1767	5S
+chr4_KI270896v1_alt	355227	355348	+	rRNA_region_1768	5S
+chr5_GL339449v2_alt	1491487	1491571	-	rRNA_region_1769	5S
+chr5_KI270897v1_alt	1022974	1023058	-	rRNA_region_1770	5S
+chr6_GL000250v2_alt	1027966	1028035	-	rRNA_region_1771	LSU-rRNA_Hsa
+chr6_GL000250v2_alt	3411136	3411228	-	rRNA_region_1772	5S
+chr6_GL000251v2_alt	1245916	1245985	-	rRNA_region_1773	LSU-rRNA_Hsa
+chr6_GL000251v2_alt	2707710	2707749	+	rRNA_region_1774	SSU-rRNA_Hsa
+chr6_GL000251v2_alt	3516873	3516965	-	rRNA_region_1775	5S
+chr6_GL000252v2_alt	1025143	1025212	-	rRNA_region_1776	LSU-rRNA_Hsa
+chr6_GL000252v2_alt	2484598	2484637	+	rRNA_region_1777	SSU-rRNA_Hsa
+chr6_GL000252v2_alt	3319942	3320034	-	rRNA_region_1778	5S
+chr6_GL000253v2_alt	1024738	1024807	-	rRNA_region_1779	LSU-rRNA_Hsa
+chr6_GL000253v2_alt	2535828	2535867	+	rRNA_region_1780	SSU-rRNA_Hsa
+chr6_GL000253v2_alt	3383541	3383633	-	rRNA_region_1781	5S
+chr6_GL000254v2_alt	1024809	1024878	-	rRNA_region_1782	LSU-rRNA_Hsa
+chr6_GL000254v2_alt	2569513	2569552	+	rRNA_region_1783	SSU-rRNA_Hsa
+chr6_GL000254v2_alt	3420567	3420659	-	rRNA_region_1784	5S
+chr6_GL000255v2_alt	1025117	1025186	-	rRNA_region_1785	LSU-rRNA_Hsa
+chr6_GL000255v2_alt	2483370	2483409	+	rRNA_region_1786	SSU-rRNA_Hsa
+chr6_GL000255v2_alt	3301740	3301832	-	rRNA_region_1787	5S
+chr6_GL000256v2_alt	1068294	1068363	-	rRNA_region_1788	LSU-rRNA_Hsa
+chr6_GL000256v2_alt	2528711	2528750	+	rRNA_region_1789	SSU-rRNA_Hsa
+chr6_GL000256v2_alt	2774623	2774806	+	rRNA_region_1790	LSU-rRNA_Hsa
+chr6_KI270798v1_alt	136878	136957	+	rRNA_region_1791	5S
+chr8_KI270813v1_alt	75147	75237	+	rRNA_region_1792	5S
+chr8_KI270822v1_alt	161830	161870	+	rRNA_region_1793	5S
+chr14_KI270844v1_alt	271683	271767	-	rRNA_region_1794	5S
+chr14_KI270846v1_alt	1128350	1128440	+	rRNA_region_1795	5S
+chr15_KI270849v1_alt	39127	39170	+	rRNA_region_1796	5S
+chr15_KI270850v1_alt	379542	379584	-	rRNA_region_1797	5S
+chr16_GL383556v1_alt	61458	61643	-	rRNA_region_1798	LSU-rRNA_Hsa
+chr16_GL383556v1_alt	65352	65640	+	rRNA_region_1799	LSU-rRNA_Hsa
+chr16_KI270853v1_alt	951424	951454	+	rRNA_region_1800	5S
+chr16_KI270853v1_alt	1284462	1284537	+	rRNA_region_1801	5S
+chr16_KI270853v1_alt	1892200	1892230	-	rRNA_region_1802	5S
+chr17_GL000258v2_alt	17910	18000	-	rRNA_region_1803	5S
+chr17_GL000258v2_alt	245977	246019	-	rRNA_region_1804	5S
+chr17_GL000258v2_alt	463912	463954	-	rRNA_region_1805	5S
+chr17_GL000258v2_alt	1491449	1491491	+	rRNA_region_1806	5S
+chr17_KI270857v1_alt	575041	575090	-	rRNA_region_1807	5S
+chr17_KI270857v1_alt	726135	726226	-	rRNA_region_1808	5S
+chr17_KI270857v1_alt	2179351	2179400	-	rRNA_region_1809	5S
+chr17_KI270857v1_alt	2767118	2767239	-	rRNA_region_1810	5S
+chr17_KI270908v1_alt	17910	18000	-	rRNA_region_1811	5S
+chr17_KI270908v1_alt	259792	259834	-	rRNA_region_1812	5S
+chr17_KI270908v1_alt	642420	642462	+	rRNA_region_1813	5S
+chr17_KI270908v1_alt	1025046	1025088	+	rRNA_region_1814	5S
+chr18_GL383567v1_alt	26810	26903	+	rRNA_region_1815	5S
+chr19_KI270867v1_alt	116463	116636	+	rRNA_region_1816	LSU-rRNA_Hsa
+chr19_KI270867v1_alt	117057	117506	+	rRNA_region_1817	LSU-rRNA_Hsa
+chr19_KI270867v1_alt	117534	117628	+	rRNA_region_1818	LSU-rRNA_Hsa
+chr19_KI270867v1_alt	117676	118169	+	rRNA_region_1819	LSU-rRNA_Hsa
+chr19_KI270867v1_alt	118180	118381	+	rRNA_region_1820	LSU-rRNA_Hsa
+chr22_KB663609v1_alt	56556	56608	-	rRNA_region_1821	5S
+chr22_KB663609v1_alt	68712	68764	-	rRNA_region_1822	5S
+chr22_KI270878v1_alt	1737	1912	+	rRNA_region_1823	LSU-rRNA_Hsa
+chr22_KI270878v1_alt	61370	61470	+	rRNA_region_1824	5S
+chr22_KI270879v1_alt	147803	147884	-	rRNA_region_1825	5S
+chr22_KI270928v1_alt	56572	56624	-	rRNA_region_1826	5S
+chr16_KI270728v1_random	1438312	1438353	-	rRNA_region_1827	5S
+chr22_KI270733v1_random	111909	111952	+	rRNA_region_1828	LSU-rRNA_Hsa
+chr22_KI270733v1_random	112258	112344	+	rRNA_region_1829	LSU-rRNA_Hsa
+chr22_KI270733v1_random	112342	112873	+	rRNA_region_1830	LSU-rRNA_Hsa
+chr22_KI270733v1_random	115894	115933	+	rRNA_region_1831	LSU-rRNA_Hsa
+chr22_KI270733v1_random	125930	127799	+	rRNA_region_1832	SSU-rRNA_Hsa
+chr22_KI270733v1_random	130203	131050	+	rRNA_region_1833	LSU-rRNA_Hsa
+chr22_KI270733v1_random	131094	133689	+	rRNA_region_1834	LSU-rRNA_Hsa
+chr22_KI270733v1_random	133724	135280	+	rRNA_region_1835	LSU-rRNA_Hsa
+chr22_KI270733v1_random	171011	172880	+	rRNA_region_1836	SSU-rRNA_Hsa
+chr22_KI270733v1_random	175282	176129	+	rRNA_region_1837	LSU-rRNA_Hsa
+chr22_KI270733v1_random	176173	178768	+	rRNA_region_1838	LSU-rRNA_Hsa
+chr22_KI270733v1_random	178803	179772	+	rRNA_region_1839	LSU-rRNA_Hsa
+chr9	9442142	9442166	-		s7426,s13418,s4841,s9761,s7409,s13418,s4841,s7409
+chr9	9442142	9442166	+		s13754,s11762,s18754,s5930,s9585,s18017,s9585,s13418,s18020,s13422,s7239,s6411,s13297,s18031,s8982,s11366,s18022,s8612,s8652,s11762,s6727r1,s11364,s7314,s18022,s13422,s7314,s11357,s11397,s6730,s11365,s11751,s13311,s8828,s11397,s7247,s11751,s13416,s8984,s7248,s11324,s18020,s9575,s11357,s11360,s13302,s13426,s13749,s18758,s11366,s11377,s8965,s11324,s8984,s7250,s18020,s13422,s13304,s8977,s11361,s18749,s8614,s13623,s14432,s11338,s9063,s11386,s13633,s18748,s14461,s9473,s14435
+chr15	77618589	77618609	-		s9064,s11326,s5938,s9066,s6720,s8828,s11326,s13761,s9473,s14441,s11326,s8984,s7431,s6046,s20342,s18017,s13749,s15679,s13749,s10014,s9064,s14447,s13418,s4970,s18031,s13761,s13761,s18037,s9585,s18259,s13418,s11750,s9064,s13761,s11397,s13771,s9066,s13761,s11324,s18020,s14441,s13299r1,s6016,s14455,s18037,s4958,s11368,s6719,s14437,s9065,s9761,s13625,s13754,s9585,s10014,s8984,s7310,s13770,s13428,s13622,s9473,s8982,s9473,s8620,s8977,s13418,s8620,s11361,s20342,s8984,s11326,s13297,s13358,s7250,s13626,s13632,s8828,s13622,s7427,s7427r2,s18020,s7241,s8828,s7454,s20342,s11326,s13298r1,s15679,s15680,s9066,s8982,s11326,s7428,s11326,s13761,s13296,s13418,s13754,s11324,s7428,s11326,s11324,s11324,s11326,s11326,s14441,s9571,s11324,s11324,s9004,s13418,s8982,s8965,s8828,s13749,s7428,s7239,s7454,s11326,s8616,s18024,s9473,s18259,s20345,s11751,s11751,s11326,s7314,s13428,s18031,s9571,s14435,s11751,s18259,s9004,s11326,s13418,s11326,s11324,s13749,s18259,s7239,s6046,s18259,s11326,s11324,s13770,s11745,s13428,s13749,s13622,s11751,s9473,s11751,s7239,s7314,s9473,s13633,s18037,s18259,s20343,s7239,s9575,s15680,s6046,s18259,s9473,s11751,s11354,s11751,s13296,s13297,s13311,s13633,s14441,s18020,s18259,s20343,s5947,s7239,s7314,s8615,s9568,s13766,s18259,s11324,s6046,s11324,s11326,s9758,s11326,s13428,s18022,s20342,s20343,s7239,s18024,s7428,s8828,s9064,s11326,s10014,s6046,s11326,s7454,s13298r2,s7314,s11354,s18017,s20343,s18259,s11326,s11324,s13418,s11751,s9571,s18031,s9571,s11751,s13770,s9568,s11324,s11383,s11324,s11326,s11324,s11326,s11324,s11326,s18259,s9473,s11326,s9571,s18022,s11326,s11326,s13749,s11326,s13298r2,s13299r2,s18022,s18024,s6720,s20342,s9064,s20345,s11751,s9758,s7431,s6046,s9004,s7239,s11368,s11751,s13622,s13770,s18017,s18022,s8652,s13749,s20345,s13749,s9004,s10014,s11324,s11751,s11326,s9004,s13761,s14432,s13749,s11326,s9775,s6731,s13754,s9758,s8616,s13633,s18022,s20342,s6720,s7314,s7454,s9473,s9571,s11326,s13749,s9473,s11354,s13311,s13622,s18022,s7239,s7314,s8616,s18017,s11751,s11326,s18024,s11326,s13296,s20343,s18031,s11326,s13770,s13428,s18259,s20345,s18022,s20343,s8982,s9473,s13299r2,s13622,s20345,s11326,s11326,s11324,s13761,s9596,s18031,s18037,s11324,s11326,s13761,s7239,s9473,s9758,s11326,s18024,s9571,s18022,s20342,s9585,s20345,s8984,s11324,s11325,s11751,s13749,s9571,s20343,s11326
+chr2	32916285	32916597	-		s8832,s11397,s18007,s8982,s8614,s9844,s11751,s13424,s13311,s18022,s7433a2,s10014,s9585,s9579,s9064,s13298r1,s4975,s9589,s8832,s8611,s10014,s9571,s18017,s7248,s5945,s18017,s8614,s4845a2,s13752,s13752,s18020,s6046,s8828,s9575,s11326,s8977,s11377,s9584,s13633,s6722,s8622,s11817,s8977,s4954,s18022,s9568,s13298r1,s8828,s8982,s13296,s18151,s13421,s4836,s9847,s4845,s14435,s8615,s13424,s9608,s8828,s10014,s11368,s7409a2,s13761,s8616,s18022,s18022,s11394,s18022,s4841,s13296,s5947,s14435,s5960,s18151,s18037,s6727r1,s13297,s8618,s13311,s8828,s9758,s9755,s18754,s15679,s13420,s9579,s5960,s6722,s13420,s8828,s10014,s18022,s9571,s10011,s13298r2,s18037,s18024,s9541,s7428,s9606,s10014,s9064,s11751,s13311,s9606,s9571,s14460,s5961,s8616,s18037,s7426,s7241,s6018,s14455,s13426,s13298r1,s10011,s4845,s11380,s18022,s9755,s11762,s18022,s13298r1,s11326,s8618,s9571,s18022,s13418,s13424,s14447,s7427,s7427r2,s4955,s9064,s13296,s6727r1,s4836,s8984,s18017,s5938,s14432,s9063,s11385,s4975,s9571,s9568,s7426,s5933,s9568,s6046,s6018,s18022,s5934,s8615,s11817,s8828,s18020,s6016,s8830,s11326,s9064,s9845,s11819,s7409a2,s11365,s14435
+chr2	32916229	32916503	+		s11338,s13619,s9064,s8616,s13749,s8623,s9575,s11383,s13766,s9758,s9589,s18022,s9755,s7247,s7248,s11340,s8616,s8615,s9064,s13768,s18020,s13298r1,s11819,s11751,s9473,s9001,s11762,s13311,s6418,s5933,s11360,s9770c,s11762,s7409a2,s13625,s11399,s18751,s11760,s9578,s11751,s8982,s13298r2,s7428,s8982,s9464,s10014,s18022,s13311,s8614,s18037,s11751,s9464,s10014,s18748,s8965,s13769,s11754,s6727r1,s9585,s9845,s11384
+chr12	66057580	66057683	-	poly-A sequence	
+chr12	66057580	66057683	+	poly-A sequence	
+chr4	1707224	1707301	-		s6046,s6731,s11324,s11326,s11354,s11368,s11380,s11383,s11751,s13296,s13297,s13298,s13299,s13311,s13358,s13622,s13633,s13761,s13770,s14441,s14447,s15679,s15680,s18017,s18020,s18022,s18024,s18031,s18259,s20342,s20343,s20344,s20345,s5948,s6720,s6721,s7239,s7314,s7318,s7427,s7427,s7428,s7431,s7454,s8615,s8616,s8620,s8830,s8965,s9004,s9065,s9473,s9568,s9571,s9575,s9578,s9596,s9758,s9770
+chr4	1707224	1707301	+		s6046,s6731,s11324,s11326,s11354,s11368,s11380,s11383,s11751,s13296,s13297,s13298,s13299,s13311,s13358,s13622,s13633,s13761,s13770,s14441,s14447,s15679,s15680,s18017,s18020,s18022,s18024,s18031,s18259,s20342,s20343,s20344,s20345,s5948,s6720,s6721,s7239,s7314,s7318,s7427,s7427,s7428,s7431,s7454,s8615,s8616,s8620,s8830,s8965,s9004,s9065,s9473,s9568,s9571,s9575,s9578,s9596,s9758,s9770
+chr6	160100708	160100822	-	poly-T
+chr6	160100708	160100822	+	poly-T
+chr7	107769944	107770310	+	poly-T
+chr7	107769944	107770310	-	poly-T	s10014,s11324,s11325,s11326,s11354,s11359,s11365,s11750,s11751,s13296,s13297,s13299r1,s13311,s13358,s13418,s13428,s13622,s13633,s13749,s13761,s15679,s18017,s18022,s18024,s18037,s18259,s20342,s20344,s20345,s4970,s6727r1,s7239,s7250,s7314,s7318,s7428,s7431,s7454,s8616,s8828,s8830,s8832,s8965,s8984,s9066,s9067,s9473,s9571,s9575,s9578,s9596
+chr14	20343071	20343409	-		prtcl/001,003,005,007,008,011,013,015,016,019,020,021,024,025,026,032,033,035,036,037,038,039,040,125,140,141,143,147,149,151
+chr14	20343071	20343409	+		prtcl/001,003,005,007,008,011,013,015,016,019,020,021,024,025,026,032,033,035,036,037,038,039,040,125,140,141,143,147,149,151
+chr14	49862551	49862844	-		prtcl/001,004,005,006,007,008,011,013,014,015,016,019,020,021,022,024,025,026,031,032,033,035,036,037,039,040,125,140,141,143,145,147,149,151
+chr14	49862551	49862844	+		prtcl/001,004,005,006,007,008,011,013,014,015,016,019,020,021,022,024,025,026,031,032,033,035,036,037,039,040,125,140,141,143,145,147,149,151
+chr14	49586579	49586876	-		prtcl/001,003,004,005,006,007,008,011,013,014,015,016,019,020,021,022,024,025,026,031,032,033,035,036,037,038,039,040,125,140,143,145,147,149,151
+chr14	49586579	49586876	+		prtcl/001,003,004,005,006,007,008,011,013,014,015,016,019,020,021,022,024,025,026,031,032,033,035,036,037,038,039,040,125,140,143,145,147,149,151
+chr6	52995642	52995925	-		prtcl/001,005,006,007,008,011,013,014,015,016,019,020,021,022,024,025,026,035,036,037,038,039,040,125,126,140,143,144,149,151
+chr6	52995642	52995925	+		prtcl/001,005,006,007,008,011,013,014,015,016,019,020,021,022,024,025,026,035,036,037,038,039,040,125,126,140,143,144,149,151
+chr9	9442046	9442312	+		prtcl/015,032,011,022,015,008,151,145,036,151,038,144,006,040,039,022,039,001,015,011,025,025,035,016,039,152,141,016,001,126,143
+chr9	9442046	9442312	-		prtcl/015,032,011,022,015,008,151,145,036,151,038,144,006,040,039,022,039,001,015,011,025,025,035,016,039,152,141,016,001,126,143
+chr9	35657860	35658010	-		prtcl/025,036,026,033,149,126,020,014,024,126,125
+chr10	20072337	20072587	-	low entropy
+chr10	20072337	20072587	+	low entropy
+chr10	20162004	20162265	-	low entropy
+chr10	20162004	20162265	+	low entropy
+chr10	2178559	2178996	-	low entropy
+chr10	2178559	2178996	+	low entropy
+chr10	29724369	29724405	-	poly-AC	
+chr10	29724369	29724405	+	poly-AC	
+chr10	37305715	37305867	-	low entropy
+chr10	37305715	37305867	+	low entropy
+chr10	37428317	37428541	-	low entropy
+chr10	37428317	37428541	+	low entropy
+chr10	72805070	72805275	-	low entropy
+chr10	72805070	72805275	+	low entropy
+chr10	82398479	82398559	-	low entropy
+chr10	82398479	82398559	+	low entropy
+chr11	108573045	108573248	-	low entropy
+chr11	108573045	108573248	+	low entropy
+chr1	117804123	117804287	-	low entropy
+chr1	117804123	117804287	+	low entropy
+chr11	21337666	21337939	-	low entropy
+chr11	21337666	21337939	+	low entropy
+chr11	3216774	3217087	-	low entropy
+chr11	3216774	3217087	+	low entropy
+chr11	58178852	58179061	-	low entropy
+chr11	58178852	58179061	+	low entropy
+chr11	81487516	81487721	-	low entropy
+chr11	81487516	81487721	+	low entropy
+chr1	19048366	19048502	-	low entropy
+chr1	19048366	19048502	+	low entropy
+chr1	197544654	197545083	-	low entropy
+chr1	197544654	197545083	+	low entropy
+chr1	201734402	201734541	-	low entropy
+chr1	201734402	201734541	+	low entropy
+chr1	204012533	204012747	-	low entropy
+chr1	204012533	204012747	+	low entropy
+chr12	120553001	120553138	-	poly-T	
+chr12	120553001	120553138	+	poly-T	
+chr12	62629278	62629420	-	low entropy
+chr12	62629278	62629420	+	low entropy
+chr12	6769910	6770023	-	low entropy
+chr12	6769910	6770023	+	low entropy
+chr12	68941143	68941222	-	low entropy
+chr12	68941143	68941222	+	low entropy
+chr13	106281901	106281966	-	low entropy
+chr13	106281901	106281966	+	low entropy
+chr13	29659839	29660031	-	low entropy
+chr13	29659839	29660031	+	low entropy
+chr13	42026354	42026496	-	poly-GA
+chr13	42026354	42026496	+	poly-GA
+chr13	95225082	95225221	-	low entropy
+chr13	95225082	95225221	+	low entropy
+chr14	36033358	36033442	-	low entropy
+chr14	36033358	36033442	+	low entropy
+chr1	48769524	48769572	-	poly-AC	
+chr1	48769524	48769572	+	poly-AC	
+chr14	90125564	90125660	-	poly-AC
+chr14	90125564	90125660	+	poly-AC
+chr14	94449377	94449646	-	low entropy
+chr14	94449377	94449646	+	low entropy
+chr15	36521423	36521745	-	low entropy
+chr15	36521423	36521745	+	low entropy
+chr15	64951229	64955078	-	low entropy
+chr15	64951229	64955078	+	low entropy
+chr15	77618497	77618627	-	poly-T
+chr15	77618497	77618627	+	poly-T
+chr15	97539674	97539934	-	low entropy
+chr15	97539674	97539934	+	low entropy
+chr1	61925154	61925296	-	poly-A	
+chr1	61925154	61925296	+	poly-A	
+chr16	19666864	19667013	-	low entropy
+chr16	19666864	19667013	+	low entropy
+chr16	20345319	20345620	-	low entropy
+chr16	20345319	20345620	+	low entropy
+chr16	26557200	26557405	-	low entropy
+chr16	26557200	26557405	+	low entropy
+chr16	62041635	62041691	-	low entropy
+chr16	62041635	62041691	+	low entropy
+chr16	6350397	6350543	-	poly-A
+chr16	6350397	6350543	+	poly-A
+chr16	9193171	9193369	-	low entropy
+chr16	9193171	9193369	+	low entropy
+chr18	14822920	14823041	-	poly-T
+chr18	14822920	14823041	+	poly-T
+chr18	63063590	63063766	-	poly-T
+chr18	63063590	63063766	+	poly-T
+chr18	63169224	63169548	-	low entropy
+chr18	63169224	63169548	+	low entropy
+chr18	68096260	68096545	-	low entropy
+chr18	68096260	68096545	+	low entropy
+chr18	79969169	79969422	-	low entropy
+chr18	79969169	79969422	+	low entropy
+chr19	2308137	2308224	-	low entropy
+chr19	2308137	2308224	+	low entropy
+chr19	31085760	31085995	-	low entropy
+chr19	31085760	31085995	+	low entropy
+chr19	3465391	3465470	-	poly-A	
+chr19	3465391	3465470	+	poly-A	
+chr20	2248960	2249148	-	low entropy
+chr20	2248960	2249148	+	low entropy
+chr20	34228111	34228237	-	low entropy
+chr20	34228111	34228237	+	low entropy
+chr20	52192689	52192892	-	low entropy
+chr20	52192689	52192892	+	low entropy
+chr20	62767362	62767727	-	low entropy
+chr20	62767362	62767727	+	low entropy
+chr2	103585550	103585834	-	low entropy
+chr2	103585550	103585834	+	low entropy
+chr21	31804334	31804521	-	low entropy
+chr21	31804334	31804521	+	low entropy
+chr2	141047043	141047111	-	low entropy
+chr2	141047043	141047111	+	low entropy
+chr2	141331470	141331563	-	low entropy
+chr2	141331470	141331563	+	low entropy
+chr2	141544281	141544486	-	low entropy
+chr2	141544281	141544486	+	low entropy
+chr2	141691414	141691495	-	low entropy
+chr2	141691414	141691495	+	low entropy
+chr2	141910126	141910216	-	poly A
+chr2	141910126	141910216	+	poly A
+chr2	169299023	169299225	-	low entropy
+chr2	169299023	169299225	+	low entropy
+chr2	201165216	201165304	-	low entropy
+chr2	201165216	201165304	+	low entropy
+chr2	206071238	206071339	-	poly-T
+chr2	206071238	206071339	+	poly-T
+chr22	32814101	32814398	-	low entropy
+chr22	32814101	32814398	+	low entropy
+chr2	234263709	234263852	-	low entropy
+chr2	234263709	234263852	+	low entropy
+chr22	37255495	37256005	-	low entropy
+chr22	37255495	37256005	+	low entropy
+chr22_KI270733v1_random	127986	128025	-	poly-GA	
+chr22_KI270733v1_random	127986	128025	+	poly-GA	
+chr2	32866665	32867138	-	low entropy
+chr2	32866665	32867138	+	low entropy
+chr2	32916159	32916658	-	poly-G
+chr2	32916159	32916658	+	poly-G
+chr2	88856757	89219622	-	IGK
+chr2	88856757	89219622	+	IGK
+chr3	130634202	130634266	-	poly-A/T	prtcl
+chr3	130634202	130634266	+	poly-A/T	prtcl
+chr3	132325578	132325631	-	low entropy
+chr3	132325578	132325631	+	low entropy
+chr3	132358019	132358110	-	low entropy
+chr3	132358019	132358110	+	low entropy
+chr3	171562436	171562858	-	low entropy
+chr3	171562436	171562858	+	low entropy
+chr3	175232179	175232290	-	low entropy
+chr3	175232179	175232290	+	low entropy
+chr3	175667052	175667279	-	low entropy
+chr3	175667052	175667279	+	low entropy
+chr3	181231822	181231850	-	SOX-OT/SNOR./RNA duplicates
+chr3	191699475	191699857	-	low entropy
+chr3	191699475	191699857	+	low entropy
+chr3	39197811	39198015	-	low entropy
+chr3	39197811	39198015	+	low entropy
+chr3	69714445	69714481	-	poly-AC	
+chr3	69714445	69714481	+	poly-AC	
+chr4	140069317	140069737	-	low entropy
+chr4	140069317	140069737	+	low entropy
+chr4	146133497	146133594	-	low entropy
+chr4	146133497	146133594	+	low entropy
+chr4	21528664	21528881	-	low entropy
+chr4	21528664	21528881	+	low entropy
+chr4	37605722	37606255	-	low entropy
+chr4	37605722	37606255	+	low entropy
+chr5	161839495	161840043	-	low entropy
+chr5	161839495	161840043	+	low entropy
+chr5	50621634	50622070	-	low entropy
+chr5	50621634	50622070	+	low entropy
+chr5	67532980	67533076	-	low entropy
+chr5	67532980	67533076	+	low entropy
+chr6	149042949	149043118	-	low entropy
+chr6	149042949	149043118	+	low entropy
+chr6	46807500	46807869	-	low entropy
+chr6	46807500	46807869	+	low entropy
+chr6	57833141	57833279	-	low entropy
+chr6	57833141	57833279	+	low entropy
+chr6	84233090	84233140	-	poly-CT	
+chr6	84233090	84233140	+	poly-CT	
+chr6	90037964	90037990	-	low entropy
+chr6	90037964	90037990	+	low entropy
+chr6	90377599	90377875	-	low entropy
+chr6	90377599	90377875	+	low entropy
+chr6	9795135	9795402	-	low entropy
+chr6	9795135	9795402	+	low entropy
+chr7	111539104	111539279	-	low entropy
+chr7	111539104	111539279	+	low entropy
+chr7	126477532	126477715	-	low entropy
+chr7	126477532	126477715	+	low entropy
+chr7	131828658	131829106	-	low entropy
+chr7	131828658	131829106	+	low entropy
+chr7	31599553	31599730	-	low entropy
+chr7	31599553	31599730	+	low entropy
+chr7	88419744	88420045	-	low entropy
+chr7	88419744	88420045	+	low entropy
+chr7	905292	906668	-	low entropy
+chr7	905292	906668	+	low entropy
+chr8	115498354	115498461	-	low entropy
+chr8	115498354	115498461	+	low entropy
+chr8	30913946	30914055	-	low entropy
+chr8	30913946	30914055	+	low entropy
+chrX	119711699	119711899	-	low entropy
+chrX	119711699	119711899	+	low entropy
+chrX	119801608	119802269	-	low entropy
+chrX	119801608	119802269	+	low entropy
+chrX	17050103	17050214	-	low entropy
+chrX	17050103	17050214	+	low entropy
+chrX	40110630	40110744	-	poly-T	
+chrX	40110630	40110744	+	poly-T	
+chrX	64287970	64289700	-	poly-A	
+chrX	64287970	64289700	+	poly-A	
+chrX	71094169	71094398	-	low entropy
+chrX	71094169	71094398	+	low entropy
+chrX	79200325	79200485	-	poly-A	
+chrX	79200325	79200485	+	poly-A	
+chrX	82680111	82680434	-	low entropy
+chrX	82680111	82680434	+	low entropy
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.in.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.in.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	unclassified	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	unclassified	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	unclassified	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	unclassified	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	unclassified	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	unclassified	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	unclassified	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	unclassified	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	unclassified	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	unclassified	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	unclassified	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	unclassified	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	unclassified	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	unclassified	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	unclassified	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	unclassified	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	unclassified	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	unclassified	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	unclassified	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	unclassified	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	unclassified	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	unclassified	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	unclassified	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	unclassified	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	unclassified	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	unclassified	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	unclassified	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	unclassified	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	unclassified	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-01.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-01.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	n_discordant_reads=2<3	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	n_support=6<8,bp_pos_stddev=25.3065>15.0,log_ratio_slope=9.62>1.8,log_ratio_rvalue=8.96>0.4	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	entropy=0.0<0.6839,n_support=4<8	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	entropy=0.5794<0.6833,n_support=3<7,log_ratio_slope=2.54>1.8	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	n_support=2<7,log_ratio_slope=11.29>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	n_support=2<7,log_ratio_slope=9.21>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	n_support=2<7,bp_pos_stddev=45.4588>15.0,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	n_support=2<8	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	entropy=0.0<0.6828,n_support=1<7	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	n_support=2<7,log_ratio_slope=12.99>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	entropy=0.0<0.6827,n_support=1<7	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	entropy=0.0<0.6827,n_support=2<7	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	entropy=0.0<0.6826,n_support=1<7	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-02.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-02.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,3 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-03.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-03.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	n_discordant_reads=2<3	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	n_support=6<8,bp_pos_stddev=25.3065>15.0,log_ratio_slope=9.62>1.8,log_ratio_rvalue=8.96>0.4	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	entropy=0.0<0.6839,n_support=4<8	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	entropy=0.5794<0.6833,n_support=3<7,log_ratio_slope=2.54>1.8	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	n_support=2<7,log_ratio_slope=11.29>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	n_support=2<7,log_ratio_slope=9.21>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	n_support=2<7,bp_pos_stddev=45.4588>15.0,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	n_support=2<8	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	entropy=0.0<0.6828,n_support=1<7	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	n_support=2<7,log_ratio_slope=12.99>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	entropy=0.0<0.6827,n_support=1<7	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	entropy=0.0<0.6827,n_support=2<7	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	entropy=0.0<0.6826,n_support=1<7	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-04.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-04.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	n_discordant_reads=2<3	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	n_support=6<8,bp_pos_stddev=25.3065>15.0,log_ratio_slope=9.62>1.8,log_ratio_rvalue=8.96>0.4	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	entropy=0.0<0.6839,n_support=4<8	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	entropy=0.5794<0.6833,n_support=3<7,log_ratio_slope=2.54>1.8	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	n_support=2<7,log_ratio_slope=11.29>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	n_support=2<7,log_ratio_slope=9.21>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	n_support=2<7,bp_pos_stddev=45.4588>15.0,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	n_support=2<8	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	entropy=0.0<0.6828,n_support=1<7	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	n_support=2<7,log_ratio_slope=12.99>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	entropy=0.0<0.6827,n_support=1<7	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	entropy=0.0<0.6827,n_support=2<7	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	entropy=0.0<0.6826,n_support=1<7	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-05.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-05.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	n_discordant_reads=2<3	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	n_support=6<8,bp_pos_stddev=25.3065>15.0,log_ratio_slope=9.62>1.8,log_ratio_rvalue=8.96>0.4	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	entropy=0.0<0.6839,n_support=4<8	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	entropy=0.5794<0.6833,n_support=3<7,log_ratio_slope=2.54>1.8	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	n_support=2<7,log_ratio_slope=11.29>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	n_support=2<7,log_ratio_slope=9.21>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	n_support=2<7,bp_pos_stddev=45.4588>15.0,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	n_support=2<8	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	entropy=0.0<0.6828,n_support=1<7	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	n_support=2<7,log_ratio_slope=12.99>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	entropy=0.0<0.6827,n_support=1<7	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	entropy=0.0<0.6827,n_support=2<7	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	entropy=0.0<0.6826,n_support=1<7	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-06.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-06.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	n_discordant_reads=2<3	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	n_support=6<8,bp_pos_stddev=25.3065>15.0,log_ratio_slope=9.62>1.8,log_ratio_rvalue=8.96>0.4	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	entropy=0.0<0.6839,n_support=4<8	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	entropy=0.5794<0.6833,n_support=3<7,log_ratio_slope=2.54>1.8	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	n_support=2<7,log_ratio_slope=11.29>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	n_support=2<7,log_ratio_slope=9.21>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	n_support=2<7,bp_pos_stddev=45.4588>15.0,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	n_support=2<8	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	entropy=0.0<0.6828,n_support=1<7	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	n_support=2<7,log_ratio_slope=12.99>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	entropy=0.0<0.6827,n_support=1<7	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	entropy=0.0<0.6827,n_support=2<7	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	entropy=0.0<0.6826,n_support=1<7	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-07.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-07.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	n_discordant_reads=2<3	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	n_support=6<8,bp_pos_stddev=25.3065>15.0,log_ratio_slope=9.62>1.8,log_ratio_rvalue=8.96>0.4	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	entropy=0.0<0.6839,n_support=4<8	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	entropy=0.5794<0.6833,n_support=3<7,log_ratio_slope=2.54>1.8	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	n_support=2<7,log_ratio_slope=11.29>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	n_support=2<7,log_ratio_slope=9.21>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	n_support=2<7,bp_pos_stddev=45.4588>15.0,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	n_support=2<8	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	entropy=0.0<0.6828,n_support=1<7	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	n_support=2<7,log_ratio_slope=12.99>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	entropy=0.0<0.6827,n_support=1<7	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	entropy=0.0<0.6827,n_support=2<7	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	entropy=0.0<0.6826,n_support=1<7	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/classify_test_16.test-08.out.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/classify_test_16.test-08.out.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,37 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39817544	-	140	0	chr21	42880007	+	0	140	3062463	valid	linear	exonic	253	170	85	6	5	2	4	1	0	0.8111	0.8497	0.0000	0.9535	0.7247	63.7843	0.8440	0.0000	0.0559	0.3651	17.3030	0.8378	0.0000	0.0289	0.0706	0.3360	1.2000	chr21:39817544/39817545(-)->chr21:42880007/42880008(+):(spanning_paired_1:65,spanning_paired_2:65,spanning_singleton_1:2,spanning_singleton_1_r:3,spanning_singleton_2:2,spanning_singleton_2_r:3)&chr21:39817544/39817545(-)->chr21:42879876/42879877(+):(discordant_mates:10,spanning_paired_1:6,spanning_paired_1_t:1,spanning_paired_2:6,spanning_paired_2_t:1,spanning_singleton_1_r:2,spanning_singleton_2_r:2)&chr21:39817544/39817545(-)->chr21:42878371/42878372(+):(discordant_mates:2,spanning_paired_1:1,spanning_paired_1_t:1,spanning_paired_2:1,spanning_paired_2_t:1,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39846044/39846045(-)->chr21:42879876/42879877(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:39817544/39817545(-)->chr21:42876293/42876294(+):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39877811	-	98	0	chr21	42873374	+	0	98	2995563	valid	linear	intronic	91	42	21	28	1	1	1	0	0	0.9528	0.9528	0.0000	0.8200	2.9207	17.3314	0.9125	0.0000	0.1910	1.5880	68.1747	0.8769	0.0000	0.1269	1.3333	0.2308	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(discordant_mates:56,spanning_paired_1:12,spanning_paired_1_t:9,spanning_paired_2:12,spanning_paired_2_t:9)
+chr21	42861433	+	6	18	chr21	42866505	-	18	6	5072	n_discordant_reads=2<3	circular	exonic	41	30	14	2	7	5	6	1	2	1.0000	0.9375	18.7474	0.7500	26.9000	3.0000	0.9425	0.0164	5.5097	20.1000	42.8000	0.8833	0.0470	6.1587	0.1429	0.3659	1.5714	chr21:42861433/42861434(+)->chr21:42866505/42866506(-):(discordant_mates:2,spanning_paired_1:2,spanning_paired_1_t:1,spanning_paired_2:2,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42861433/42861434(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3,spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:42860568/42860569(+)->chr21:42867210/42867211(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)&chr21:42860320/42860321(+)->chr21:42861520/42861521(-):(spanning_paired_1:1,spanning_paired_2:1,spanning_singleton_1:1,spanning_singleton_2:1)&chr21:42859986/42859987(+)->chr21:42863878/42863879(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:42860320/42860321(+)->chr21:42866505/42866506(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:42866446/42866447(+)->chr21:42870110/42870111(-):(discordant_mates:2)
+chr21	39836011	+	0	8	chr21	39836545	-	8	0	534	n_support=6<8,bp_pos_stddev=25.3065>15.0,log_ratio_slope=9.62>1.8,log_ratio_rvalue=8.96>0.4	circular	intronic	17	12	6	0	2	2	2	0	0	0.4056	0.6934	25.3065	0.0000	1.5000	29.5000	0.7746	0.2254	0.8660	0.0000	93.0000	0.0000	1.0000	0.0000	0.0000	0.3529	2.0000	chr21:39836011/39836012(+)->chr21:39836545/39836546(-):(spanning_paired_1_t:4,spanning_paired_2_t:4)&chr21:39835707/39835708(+)->chr21:39839850/39839851(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39875880	+	0	6	chr21	39876476	-	6	0	596	entropy=0.0<0.6839,n_support=4<8	circular	intronic	12	8	4	0	2	2	2	0	0	0.0000	0.4056	0.0000	0.0000	0.0000	68.0000	0.0000	1.0000	0.0000	0.0000	58.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39875880/39875881(+)->chr21:39876476/39876477(-):(spanning_paired_1:3,spanning_paired_2:3)&chr21:39874280/39874281(+)->chr21:39876277/39876278(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39851814	+	0	6	chr21	39852667	-	6	0	853	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39851814/39851815(+)->chr21:39852667/39852668(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39859611	+	0	6	chr21	39860278	-	6	0	667	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	40.0000	0.0000	1.0000	0.0000	0.0000	86.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39859611/39859612(+)->chr21:39860278/39860279(-):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr21	39883871	+	0	6	chr21	39885212	-	6	0	1341	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	6	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	94.0000	0.0000	1.0000	0.0000	0.0000	32.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39883871/39883872(+)->chr21:39885212/39885213(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	42843732	+	0	6	chr21	42870116	-	6	0	26384	entropy=0.0<0.6835,n_support=3<7	circular	intronic	9	11	3	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	0.0000	72.0000	0.0000	1.0000	0.0000	0.0000	0.6111	2.0000	chr21:42843732/42843733(+)->chr21:42870116/42870117(-):(spanning_paired_1:3,spanning_paired_2:3)
+chr21	39755685	+	0	6	chr21	39775541	-	6	0	19856	entropy=0.5794<0.6833,n_support=3<7,log_ratio_slope=2.54>1.8	circular	intronic	7	4	2	1	1	1	1	0	0	0.5794	0.5794	0.0000	1.0000	19.0000	81.6667	0.8660	0.3333	10.9697	1.5000	34.5000	0.8660	0.3333	0.8660	0.5000	0.2857	2.0000	chr21:39755685/39755686(+)->chr21:39775541/39775542(-):(discordant_mates:2,spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39834195	+	0	4	chr21	39840659	-	4	0	6464	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	2.0000	54.0000	1.0000	0.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39834195/39834196(+)->chr21:39840659/39840660(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39842038	+	0	4	chr21	39843053	-	4	0	1015	n_support=2<7,log_ratio_slope=11.29>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	80.0000	0.0000	1.0000	0.0000	8.0000	38.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39842038/39842039(+)->chr21:39843053/39843054(-):(spanning_paired_1:2,spanning_paired_2:2)
+chr21	39850667	+	0	4	chr21	39854268	-	4	0	3601	n_support=2<7,log_ratio_slope=9.21>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	46.0000	0.0000	1.0000	0.0000	1.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:39850667/39850668(+)->chr21:39854268/39854269(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	42877474	+	0	4	chr21	42878062	-	4	0	588	n_support=2<7,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	6	4	2	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	0.0000	97.0000	0.0000	1.0000	0.0000	2.0000	27.0000	1.0000	0.0000	0.0000	0.0000	0.3333	2.0000	chr21:42877474/42877475(+)->chr21:42878062/42878063(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39766042	+	0	4	chr21	39766803	-	4	0	761	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	70.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39766042/39766043(+)->chr21:39766803/39766804(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39797816	+	0	4	chr21	39803772	-	4	0	5956	entropy=0.0<0.6832,n_support=2<7	circular	intronic	6	4	2	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	28.0000	0.0000	1.0000	0.0000	0.0000	98.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39797816/39797817(+)->chr21:39803772/39803773(-):(spanning_paired_1_t:2,spanning_paired_2_t:2)
+chr21	39874520	+	2	2	chr21	39875907	-	2	2	1387	n_support=2<7,bp_pos_stddev=45.4588>15.0,log_ratio_slope=9.9>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	5	4	2	0	1	1	1	0	0	1.0000	1.0000	45.4588	0.0000	0.0000	45.0000	0.0000	1.0000	0.0000	2.0000	79.0000	1.0000	0.0000	0.0000	0.0000	0.4000	2.0000	chr21:39874520/39874521(+)->chr21:39875907/39875908(-):(spanning_paired_1_t:1,spanning_paired_2_t:1,spanning_singleton_1:1,spanning_singleton_2:1)
+chr21	39844342	+	2	0	chr21	39845160	-	0	2	818	n_support=2<8	circular	intronic	3	3	1	1	2	2	2	0	0	0.0000	1.0000	0.0000	0.0000	0.0000	73.0000	0.0000	1.0000	0.0000	0.0000	53.0000	0.0000	1.0000	0.0000	1.0000	0.5000	2.0000	chr21:39844342/39844343(+)->chr21:39845160/39845161(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)&chr21:39843961/39843962(+)->chr21:39845291/39845292(-):(discordant_mates:2)
+chr21	39768473	+	0	2	chr21	39768936	-	2	0	463	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	77.0000	0.0000	1.0000	0.0000	0.0000	49.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39768473/39768474(+)->chr21:39768936/39768937(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39838727	+	0	2	chr21	39863701	-	2	0	24974	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	56.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39838727/39838728(+)->chr21:39863701/39863702(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39849621	+	0	2	chr21	39850505	-	2	0	884	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	52.0000	0.0000	1.0000	0.0000	0.0000	74.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39849621/39849622(+)->chr21:39850505/39850506(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39858845	+	0	2	chr21	39859592	-	2	0	747	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	41.0000	0.0000	1.0000	0.0000	0.0000	84.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39858845/39858846(+)->chr21:39859592/39859593(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	39863020	+	0	2	chr21	39863629	-	2	0	609	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	101.0000	0.0000	1.0000	0.0000	0.0000	25.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39863020/39863021(+)->chr21:39863629/39863630(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	39871034	+	0	2	chr21	39877568	-	2	0	6534	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	66.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:39871034/39871035(+)->chr21:39877568/39877569(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42836581	+	0	2	chr21	42839672	-	2	0	3091	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	19.0000	0.0000	1.0000	0.0000	0.0000	107.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42836581/42836582(+)->chr21:42839672/42839673(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)
+chr21	42853701	+	0	2	chr21	42860029	-	2	0	6328	entropy=0.0<0.6828,n_support=1<7	circular	intronic	3	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	22.0000	0.0000	1.0000	0.0000	0.0000	31.0000	0.0000	1.0000	0.0000	0.0000	0.3333	2.0000	chr21:42853701/42853702(+)->chr21:42860029/42860030(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42866483	-	0	2	chr21	42870116	-	2	0	3633	entropy=0.0<0.6828,n_support=1<7	linear	intronic	3	9	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	38.0000	0.0000	1.0000	0.0000	0.0000	88.0000	0.0000	1.0000	0.0000	0.0000	1.5000	2.0000	chr21:42866483/42866484(-)->chr21:42870116/42870117(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	42839824	+	0	4	chr21	42840323	-	4	0	499	n_support=2<7,log_ratio_slope=12.99>1.8,log_ratio_rvalue=9.21>0.4	circular	intronic	2	2	0	2	1	1	1	0	0	1.0000	1.0000	0.0000	0.4056	44.0000	82.0000	1.0000	0.0000	0.0000	0.0000	120.0000	0.0000	1.0000	0.0000	40.0000	0.5000	2.0000	chr21:42839824/42839825(+)->chr21:42840323/42840324(-):(discordant_mates:4)
+chr21	39770910	+	2	0	chr21	39771416	-	0	2	506	entropy=0.0<0.6827,n_support=1<7	circular	intronic	2	2	1	0	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	75.0000	0.0000	1.0000	0.0000	0.0000	48.0000	0.0000	1.0000	0.0000	0.0000	0.5000	2.0000	chr21:39770910/39770911(+)->chr21:39771416/39771417(-):(spanning_singleton_1_r:1,spanning_singleton_2_r:1)
+chr21	39860702	-	4	0	chr21	42843890	+	0	4	2983188	entropy=0.0<0.6827,n_support=2<7	linear	intronic	2	0	0	2	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	40.0000	0.0000	2.0000	chr21:39860702/39860703(-)->chr21:42843890/42843891(+):(discordant_mates:4)
+chr21	39781087	+	0	2	chr21	39782101	-	2	0	1014	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39781087/39781088(+)->chr21:39782101/39782102(-):(discordant_mates:2)
+chr21	39846131	+	0	2	chr21	39846834	-	2	0	703	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	39.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39846131/39846132(+)->chr21:39846834/39846835(-):(discordant_mates:2)
+chr21	39853321	-	2	0	chr21	42851610	+	0	2	2998289	entropy=0.0<0.6826,n_support=1<7	linear	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:39853321/39853322(-)->chr21:42851610/42851611(+):(discordant_mates:2)
+chr21	42840341	+	0	2	chr21	42842586	-	2	0	2245	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	0.0000	124.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42840341/42840342(+)->chr21:42842586/42842587(-):(discordant_mates:2)
+chr21	42843861	+	2	0	chr21	42845272	-	0	2	1411	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	65.0000	0.0000	1.0000	0.0000	0.0000	60.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42843861/42843862(+)->chr21:42845272/42845273(-):(discordant_mates:2)
+chr21	42863757	+	0	2	chr21	42864220	-	2	0	463	entropy=0.0<0.6826,n_support=1<7	circular	intronic	1	0	0	1	1	1	1	0	0	0.0000	0.0000	0.0000	0.0000	0.0000	126.0000	0.0000	1.0000	0.0000	0.0000	123.0000	0.0000	1.0000	0.0000	20.0000	0.0000	2.0000	chr21:42863757/42863758(+)->chr21:42864220/42864221(-):(discordant_mates:2)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/detect.txt
--- a/test-data/detect.txt	Fri Apr 28 03:56:08 2017 -0400
+++ b/test-data/detect.txt	Thu Aug 10 05:38:27 2017 -0400
@@ -1,2 +1,2 @@
-chr-A	pos-A	direction-A	chr-B	pos-B	direction-B	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	data-structure
-chr21	39877811	-	chr21	42873374	+	2995563	n_discordant_reads=0<1,n_support=3<8	linear	intronic	9	6	3	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(spanning_paired_1_t:3,spanning_paired_2_t:3)
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-B-acceptor	pos-B-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	39877811	-	6	0	chr21	42873374	+	0	6	2995563	unclassified	linear	intronic	9	6	3	0	1	1	1	0	0	1.0000	1.0000	0.0000	0.0000	17.0000	37.3333	0.9994	0.0216	0.5774	24.0000	42.3333	0.9954	0.0611	2.3094	0.0000	0.3333	2.0000	chr21:39877811/39877812(-)->chr21:42873374/42873375(+):(spanning_paired_1_t:3,spanning_paired_2_t:3)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/fix_test-01.fixed.bam
Binary file test-data/fix_test-01.fixed.bam has changed
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/integrate_test_terg_s041.in.dbed
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/integrate_test_terg_s041.in.dbed	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,6 @@
+chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	data-structure
+chr21	38445621	-	200	0	chr21	41498118	+	0	200	3052497	valid	linear	exonic	588	378	189	21	14	7	9	2	4	0.7421	0.8197	0	0.7162	0.7344	19.9882	0.9657	0	0.0178	0.7194	21.976	0.9648	0	0.0177	0.1111	0.3214	1.1429	chr21:38445621/38445622(-)->chr21:41498118/41498119(+):(discordant_mates:14,spanning_paired_1:114,spanning_paired_1_t:4,spanning_paired_2:114,spanning_paired_2_t:4)&chr21:38445621/38445622(-)->chr21:41508080/41508081(+):(spanning_paired_1:33,spanning_paired_2:33)&chr21:38445621/38445622(-)->chr21:41507949/41507950(+):(discordant_mates:8,spanning_paired_1:15,spanning_paired_2:15)&chr21:38474121/38474122(-)->chr21:41498118/41498119(+):(spanning_paired_1:14,spanning_paired_2:14)&chr21:38445621/38445622(-)->chr21:41480475/41480476(+):(discordant_mates:6,spanning_paired_1:2,spanning_paired_2:2)&chr21:38423561/38423562(-)->chr21:41498118/41498119(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:38445621/38445622(-)->chr21:41506444/41506445(+):(discordant_mates:6,spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:38445621/38445622(-)->chr21:41504366/41504367(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38446208/38446209(-)->chr21:41498118/41498119(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38474121/38474122(-)->chr21:41480475/41480476(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38474121/38474122(-)->chr21:41508080/41508081(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38423567/38423568(-)->chr21:41485824/41485825(+):(discordant_mates:4)&chr21:38445482/38445483(-)->chr21:41500346/41500347(+):(discordant_mates:2)&chr21:38474093/38474094(-)->chr21:41507966/41507967(+):(discordant_mates:2)
+chr21	38487350	-	200	0	chr21	41479719	+	0	200	2992369	valid	linear	intronic	151	96	48	7	1	1	1	0	0	0.869	0.869	0.2887	0.8124	2.1465	5.6435	0.9817	0	0.0571	1.9162	26.2818	0.99	0	0.0376	0.1458	0.3179	2	chr21:38487350/38487351(-)->chr21:41479719/41479720(+):(discordant_mates:14,spanning_paired_1:41,spanning_paired_1_t:7,spanning_paired_2:41,spanning_paired_2_t:7)
+chr21	36338771	+	0	10	chr21	36344707	-	10	0	5936	valid	circular	exonic	117	58	38	3	2	2	2	0	0	0.8536	0.8591	2.436	0.871	2.1714	19.1829	0.9605	0	0.1021	2.0941	32.6902	0.9725	0	0.0814	0.0789	0.2479	2	chr21:36338771/36338772(+)->chr21:36344707/36344708(-):(discordant_mates:6,spanning_paired_1:14,spanning_paired_1_t:23,spanning_paired_2:14,spanning_paired_2_t:23)&chr21:36338841/36338842(+)->chr21:36341534/36341535(-):(spanning_paired_1:1,spanning_paired_2:1)
+chr21	29321220	+	10	0	chr21	29329693	-	0	10	8473	valid	circular	exonic	49	35	15	4	4	4	3	0	0	0.8605	0.8018	0	0.6667	8.3531	34.3077	0.9863	0	0.4412	9.4685	14.5897	0.9701	0	0.749	0.2667	0.3571	1.75	chr21:29321220/29321221(+)->chr21:29329693/29329694(-):(discordant_mates:4,spanning_paired_1:9,spanning_paired_1_t:1,spanning_paired_2:9,spanning_paired_2_t:1)&chr21:29326058/29326059(+)->chr21:29329693/29329694(-):(spanning_paired_1:4,spanning_paired_2:4)&chr21:29327324/29327325(+)->chr21:29329704/29329705(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:29321216/29321217(+)->chr21:29329647/29329648(-):(discordant_mates:4)
+chr21	33414887	+	5	5	chr21	33432871	-	5	5	17984	valid	circular	exonic	20	12	6	2	3	3	2	1	0	0.8277	0.9167	0	0.75	12.6	50.8	0.7995	0.1045	5.4663	12.8	24.2	0.8072	0.0987	5.4049	0.3333	0.3	1.6667	chr21:33414887/33414888(+)->chr21:33432871/33432872(-):(spanning_paired_1:2,spanning_paired_1_t:3,spanning_paired_2:2,spanning_paired_2_t:3)&chr21:33426883/33426884(+)->chr21:33432871/33432872(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:33414915/33414916(+)->chr21:33421509/33421510(-):(discordant_mates:4)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/integrate_test_terg_s041.out.no-gtf.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/integrate_test_terg_s041.out.no-gtf.txt	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,6 @@
+shared-id	fusion	chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	frameshift=0	frameshift=+1	frameshift=+2	data-structure
+1	TMPRSS2->ERG	chr21	38487350	-	200	0	chr21	41479719	+	0	200	2992369	valid	linear	intronic	151	96	48	7	1	1	1	0	0	0.869	0.869	0.2887	0.8124	2.1465	5.6435	0.9817	0	0.0571	1.9162	26.2818	0.99	0	0.0376	0.1458	0.3179	2				chr21:38487350/38487351(-)->chr21:41479719/41479720(+):(discordant_mates:14,spanning_paired_1:41,spanning_paired_1_t:7,spanning_paired_2:41,spanning_paired_2_t:7)
+1	TMPRSS2->ERG	chr21	38445621	-	200	0	chr21	41498118	+	0	200	3052497	valid	linear	exonic	588	378	189	21	14	7	9	2	4	0.7421	0.8197	0	0.7162	0.7344	19.9882	0.9657	0	0.0178	0.7194	21.976	0.9648	0	0.0177	0.1111	0.3214	1.1429	TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000442448.5)-ensembl			chr21:38445621/38445622(-)->chr21:41498118/41498119(+):(discordant_mates:14,spanning_paired_1:114,spanning_paired_1_t:4,spanning_paired_2:114,spanning_paired_2_t:4)&chr21:38445621/38445622(-)->chr21:41508080/41508081(+):(spanning_paired_1:33,spanning_paired_2:33)&chr21:38445621/38445622(-)->chr21:41507949/41507950(+):(discordant_mates:8,spanning_paired_1:15,spanning_paired_2:15)&chr21:38474121/38474122(-)->chr21:41498118/41498119(+):(spanning_paired_1:14,spanning_paired_2:14)&chr21:38445621/38445622(-)->chr21:41480475/41480476(+):(discordant_mates:6,spanning_paired_1:2,spanning_paired_2:2)&chr21:38423561/38423562(-)->chr21:41498118/41498119(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:38445621/38445622(-)->chr21:41506444/41506445(+):(discordant_mates:6,spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:38445621/38445622(-)->chr21:41504366/41504367(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38446208/38446209(-)->chr21:41498118/41498119(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38474121/38474122(-)->chr21:41480475/41480476(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38474121/38474122(-)->chr21:41508080/41508081(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38423567/38423568(-)->chr21:41485824/41485825(+):(discordant_mates:4)&chr21:38445482/38445483(-)->chr21:41500346/41500347(+):(discordant_mates:2)&chr21:38474093/38474094(-)->chr21:41507966/41507967(+):(discordant_mates:2)
+2	chr21:36338771->chr21:36344707	chr21	36338771	+	0	10	chr21	36344707	-	10	0	5936	valid	circular	exonic	117	58	38	3	2	2	2	0	0	0.8536	0.8591	2.436	0.871	2.1714	19.1829	0.9605	0	0.1021	2.0941	32.6902	0.9725	0	0.0814	0.0789	0.2479	2				chr21:36338771/36338772(+)->chr21:36344707/36344708(-):(discordant_mates:6,spanning_paired_1:14,spanning_paired_1_t:23,spanning_paired_2:14,spanning_paired_2_t:23)&chr21:36338841/36338842(+)->chr21:36341534/36341535(-):(spanning_paired_1:1,spanning_paired_2:1)
+3	chr21:29329693->chr21:29321220	chr21	29321220	+	10	0	chr21	29329693	-	0	10	8473	valid	circular	exonic	49	35	15	4	4	4	3	0	0	0.8605	0.8018	0	0.6667	8.3531	34.3077	0.9863	0	0.4412	9.4685	14.5897	0.9701	0	0.749	0.2667	0.3571	1.75				chr21:29321220/29321221(+)->chr21:29329693/29329694(-):(discordant_mates:4,spanning_paired_1:9,spanning_paired_1_t:1,spanning_paired_2:9,spanning_paired_2_t:1)&chr21:29326058/29326059(+)->chr21:29329693/29329694(-):(spanning_paired_1:4,spanning_paired_2:4)&chr21:29327324/29327325(+)->chr21:29329704/29329705(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:29321216/29321217(+)->chr21:29329647/29329648(-):(discordant_mates:4)
+4	chr21:33432871<->chr21:33414887	chr21	33414887	+	5	5	chr21	33432871	-	5	5	17984	valid	circular	exonic	20	12	6	2	3	3	2	1	0	0.8277	0.9167	0	0.75	12.6	50.8	0.7995	0.1045	5.4663	12.8	24.2	0.8072	0.0987	5.4049	0.3333	0.3	1.6667				chr21:33414887/33414888(+)->chr21:33432871/33432872(-):(spanning_paired_1:2,spanning_paired_1_t:3,spanning_paired_2:2,spanning_paired_2_t:3)&chr21:33426883/33426884(+)->chr21:33432871/33432872(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:33414915/33414916(+)->chr21:33421509/33421510(-):(discordant_mates:4)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/integrate_test_terg_s041.out.txt
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/integrate_test_terg_s041.out.txt	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,6 @@
+shared-id	fusion	chr-A	pos-A	direction-A	pos-A-acceptor	pos-A-donor	chr-B	pos-B	direction-B	pos-A-acceptor	pos-A-donor	genomic-distance	filter-status	circRNA	intronic/exonic	score	soft+hardclips	n-split-reads	n-discordant-reads	n-edges	n-nodes-A	n-nodes-B	n-splice-junc-A	n-splice-junc-B	entropy-bp-edge	entropy-all-edges	bp-pos-stddev	entropy-disco-bps	lr-A-slope	lr-A-intercept	lr-A-rvalue	lr-A-pvalue	lr-A-stderr	lr-B-slope	lr-B-intercept	lr-B-rvalue	lr-B-pvalue	lr-B-stderr	disco/split	clips/score	nodes/edge	frameshift=0	frameshift=+1	frameshift=+2	data-structure
+1	TMPRSS2->ERG	chr21	38487350	-	200	0	chr21	41479719	+	0	200	2992369	valid	linear	intronic	151	96	48	7	1	1	1	0	0	0.869	0.869	0.2887	0.8124	2.1465	5.6435	0.9817	0	0.0571	1.9162	26.2818	0.99	0	0.0376	0.1458	0.3179	2				chr21:38487350/38487351(-)->chr21:41479719/41479720(+):(discordant_mates:14,spanning_paired_1:41,spanning_paired_1_t:7,spanning_paired_2:41,spanning_paired_2_t:7)
+1	TMPRSS2->ERG	chr21	38445621	-	200	0	chr21	41498118	+	0	200	3052497	valid	linear	exonic	588	378	189	21	14	7	9	2	4	0.7421	0.8197	0	0.7162	0.7344	19.9882	0.9657	0	0.0178	0.7194	21.976	0.9648	0	0.0177	0.1111	0.3214	1.1429	TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000332149.9)-ensembl_havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000398585.7)-ensembl->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000424093.5)-havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000454499.5)-havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000455813.1)-havana->ERG(ENST00000442448.5)-ensembl,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000288319.11)-ensembl_havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398905.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398907.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398910.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398911.5)-havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000398919.6)-ensembl_havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000417133.6)-ensembl_havana,TMPRSS2(ENST00000458356.5)-havana->ERG(ENST00000442448.5)-ensembl			chr21:38445621/38445622(-)->chr21:41498118/41498119(+):(discordant_mates:14,spanning_paired_1:114,spanning_paired_1_t:4,spanning_paired_2:114,spanning_paired_2_t:4)&chr21:38445621/38445622(-)->chr21:41508080/41508081(+):(spanning_paired_1:33,spanning_paired_2:33)&chr21:38445621/38445622(-)->chr21:41507949/41507950(+):(discordant_mates:8,spanning_paired_1:15,spanning_paired_2:15)&chr21:38474121/38474122(-)->chr21:41498118/41498119(+):(spanning_paired_1:14,spanning_paired_2:14)&chr21:38445621/38445622(-)->chr21:41480475/41480476(+):(discordant_mates:6,spanning_paired_1:2,spanning_paired_2:2)&chr21:38423561/38423562(-)->chr21:41498118/41498119(+):(spanning_paired_1:2,spanning_paired_2:2)&chr21:38445621/38445622(-)->chr21:41506444/41506445(+):(discordant_mates:6,spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:38445621/38445622(-)->chr21:41504366/41504367(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38446208/38446209(-)->chr21:41498118/41498119(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38474121/38474122(-)->chr21:41480475/41480476(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38474121/38474122(-)->chr21:41508080/41508081(+):(spanning_paired_1:1,spanning_paired_2:1)&chr21:38423567/38423568(-)->chr21:41485824/41485825(+):(discordant_mates:4)&chr21:38445482/38445483(-)->chr21:41500346/41500347(+):(discordant_mates:2)&chr21:38474093/38474094(-)->chr21:41507966/41507967(+):(discordant_mates:2)
+2	chr21:36338771->chr21:36344707	chr21	36338771	+	0	10	chr21	36344707	-	10	0	5936	valid	circular	exonic	117	58	38	3	2	2	2	0	0	0.8536	0.8591	2.436	0.871	2.1714	19.1829	0.9605	0	0.1021	2.0941	32.6902	0.9725	0	0.0814	0.0789	0.2479	2				chr21:36338771/36338772(+)->chr21:36344707/36344708(-):(discordant_mates:6,spanning_paired_1:14,spanning_paired_1_t:23,spanning_paired_2:14,spanning_paired_2_t:23)&chr21:36338841/36338842(+)->chr21:36341534/36341535(-):(spanning_paired_1:1,spanning_paired_2:1)
+3	chr21:29329693->chr21:29321220	chr21	29321220	+	10	0	chr21	29329693	-	0	10	8473	valid	circular	exonic	49	35	15	4	4	4	3	0	0	0.8605	0.8018	0	0.6667	8.3531	34.3077	0.9863	0	0.4412	9.4685	14.5897	0.9701	0	0.749	0.2667	0.3571	1.75				chr21:29321220/29321221(+)->chr21:29329693/29329694(-):(discordant_mates:4,spanning_paired_1:9,spanning_paired_1_t:1,spanning_paired_2:9,spanning_paired_2_t:1)&chr21:29326058/29326059(+)->chr21:29329693/29329694(-):(spanning_paired_1:4,spanning_paired_2:4)&chr21:29327324/29327325(+)->chr21:29329704/29329705(-):(spanning_paired_1_t:1,spanning_paired_2_t:1)&chr21:29321216/29321217(+)->chr21:29329647/29329648(-):(discordant_mates:4)
+4	chr21:33432871<->chr21:33414887	chr21	33414887	+	5	5	chr21	33432871	-	5	5	17984	valid	circular	exonic	20	12	6	2	3	3	2	1	0	0.8277	0.9167	0	0.75	12.6	50.8	0.7995	0.1045	5.4663	12.8	24.2	0.8072	0.0987	5.4049	0.3333	0.3	1.6667				chr21:33414887/33414888(+)->chr21:33432871/33432872(-):(spanning_paired_1:2,spanning_paired_1_t:3,spanning_paired_2:2,spanning_paired_2_t:3)&chr21:33426883/33426884(+)->chr21:33432871/33432872(-):(spanning_paired_1:1,spanning_paired_2:1)&chr21:33414915/33414916(+)->chr21:33421509/33421510(-):(discordant_mates:4)
diff -r 173ca9768e22 -r 5348cfd3ba5c test-data/integrate_tmprss-erg.hg38.gtf
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/integrate_tmprss-erg.hg38.gtf	Thu Aug 10 05:38:27 2017 -0400
@@ -0,0 +1,159 @@
+chr21	ensembl_havana	gene	38380027	38661780	.	-	.	gene_id "ENSG00000157554"; gene_version "18"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
+chr21	havana	CDS	38498363	38498380	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "1"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "2"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398905"; transcript_version "5"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS82674"; protein_id "ENSP00000381877"; protein_version "1"; tag "basic"; transcript_support_level "1";
+chr21	havana	CDS	38498363	38498380	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "1"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "2"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38400574	38400645	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398907"; transcript_version "5"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381879"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38498363	38498380	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "1"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "2"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38400574	38400645	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000288319"; transcript_version "11"; exon_number "10"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13658"; protein_id "ENSP00000288319"; protein_version "7"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38423410	38423521	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398897"; transcript_version "5"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS58789"; protein_id "ENSP00000381871"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398897"; transcript_version "5"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS58789"; protein_id "ENSP00000381871"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398897"; transcript_version "5"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS58789"; protein_id "ENSP00000381871"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398897"; transcript_version "5"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS58789"; protein_id "ENSP00000381871"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398897"; transcript_version "5"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS58789"; protein_id "ENSP00000381871"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398897"; transcript_version "5"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS58789"; protein_id "ENSP00000381871"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398897"; transcript_version "5"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS58789"; protein_id "ENSP00000381871"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38575662	38575700	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "2"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398911"; transcript_version "5"; exon_number "10"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000381882"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38575662	38575700	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38400574	38400645	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "10"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "11"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000417133"; transcript_version "6"; exon_number "12"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-208"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000414150"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	38575662	38575700	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38400574	38400645	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "10"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398910"; transcript_version "5"; exon_number "11"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000381881"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38575662	38575700	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "10"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000442448"; transcript_version "5"; exon_number "11"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-210"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13657"; protein_id "ENSP00000394694"; protein_version "1"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	CDS	38423410	38423521	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "2"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38400574	38400645	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000453032"; transcript_version "6"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-211"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46649"; protein_id "ENSP00000396268"; protein_version "2"; tag "basic"; transcript_support_level "2";
+chr21	ensembl_havana	CDS	38575662	38575700	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "3"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38445404	38445621	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38400574	38400645	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38392376	38392444	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38391659	38391715	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "10"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38390995	38391042	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "11"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	38383406	38383923	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000398919"; transcript_version "6"; exon_number "12"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-207"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS46648"; protein_id "ENSP00000381891"; protein_version "2"; tag "basic"; transcript_support_level "1";
+chr21	ensembl	CDS	38445404	38445543	.	-	0	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000429727"; transcript_version "6"; exon_number "4"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-209"; transcript_source "ensembl"; transcript_biotype "protein_coding"; protein_id "ENSP00000415659"; protein_version "3"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38423410	38423561	.	-	1	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000429727"; transcript_version "6"; exon_number "5"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-209"; transcript_source "ensembl"; transcript_biotype "protein_coding"; protein_id "ENSP00000415659"; protein_version "3"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38403506	38403709	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000429727"; transcript_version "6"; exon_number "6"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-209"; transcript_source "ensembl"; transcript_biotype "protein_coding"; protein_id "ENSP00000415659"; protein_version "3"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38402557	38402637	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000429727"; transcript_version "6"; exon_number "7"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-209"; transcript_source "ensembl"; transcript_biotype "protein_coding"; protein_id "ENSP00000415659"; protein_version "3"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38400574	38400645	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000429727"; transcript_version "6"; exon_number "8"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-209"; transcript_source "ensembl"; transcript_biotype "protein_coding"; protein_id "ENSP00000415659"; protein_version "3"; tag "basic"; transcript_support_level "5";
+chr21	ensembl	CDS	38400011	38400021	.	-	2	gene_id "ENSG00000157554"; gene_version "18"; transcript_id "ENST00000429727"; transcript_version "6"; exon_number "9"; gene_name "ERG"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ERG-209"; transcript_source "ensembl"; transcript_biotype "protein_coding"; protein_id "ENSP00000415659"; protein_version "3"; tag "basic"; transcript_support_level "5";
+chr21	ensembl_havana	gene	41464551	41531116	.	-	.	gene_id "ENSG00000184012"; gene_version "11"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
+chr21	ensembl_havana	CDS	41498119	41498133	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "2"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41494356	41494578	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "3"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41489507	41489593	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "4"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41488394	41488513	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "5"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41480476	41480602	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "6"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41479172	41479282	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "7"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41476577	41476620	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "8"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41473325	41473496	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "9"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41471806	41471981	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "10"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41470648	41470743	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "11"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41468396	41468538	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "12"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41467734	41467886	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "13"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl_havana	CDS	41466145	41466153	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000332149"; transcript_version "9"; exon_number "14"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000330330"; protein_version "5"; tag "basic"; transcript_support_level "1";
+chr21	ensembl	CDS	41507950	41508004	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "1"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41498119	41498189	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "2"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41494356	41494578	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "3"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41489507	41489593	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "4"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41488394	41488513	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "5"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41480476	41480602	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "6"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41479172	41479282	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "7"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41476577	41476620	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "8"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41473325	41473496	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "9"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41471806	41471981	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "10"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41470648	41470743	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "11"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41468396	41468538	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "12"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41467734	41467886	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "13"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	ensembl	CDS	41466145	41466153	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000398585"; transcript_version "7"; exon_number "14"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-202"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS54486"; protein_id "ENSP00000381588"; protein_version "3"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41498119	41498133	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "2"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41494356	41494578	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "3"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41489507	41489593	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "4"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41488394	41488513	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "5"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41480476	41480602	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "6"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41479172	41479282	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "7"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41476577	41476620	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "8"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41473325	41473496	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "9"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41471806	41471981	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "10"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41470648	41470743	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "11"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41468396	41468538	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "12"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41467734	41467886	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "13"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41466145	41466153	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000458356"; transcript_version "5"; exon_number "14"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-206"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS33564"; protein_id "ENSP00000391216"; protein_version "1"; tag "basic"; transcript_support_level "2";
+chr21	havana	CDS	41498119	41498133	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "3"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41494356	41494578	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "4"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41489507	41489593	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "5"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41488394	41488513	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "6"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41480476	41480602	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "7"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41479172	41479282	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "8"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41476577	41476620	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "9"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41473325	41473496	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "10"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41471806	41471981	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "11"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41470648	41470743	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "12"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41468396	41468538	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "13"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41467734	41467886	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000454499"; transcript_version "5"; exon_number "14"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000389006"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "1";
+chr21	havana	CDS	41498119	41498133	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000424093"; transcript_version "5"; exon_number "2"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397846"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+chr21	havana	CDS	41494356	41494578	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000424093"; transcript_version "5"; exon_number "3"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397846"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+chr21	havana	CDS	41489507	41489593	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000424093"; transcript_version "5"; exon_number "4"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397846"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+chr21	havana	CDS	41480476	41480602	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000424093"; transcript_version "5"; exon_number "5"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397846"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+chr21	havana	CDS	41479172	41479282	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000424093"; transcript_version "5"; exon_number "6"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397846"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+chr21	havana	CDS	41476577	41476620	.	-	1	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000424093"; transcript_version "5"; exon_number "7"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397846"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+chr21	havana	CDS	41473446	41473496	.	-	2	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000424093"; transcript_version "5"; exon_number "8"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397846"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
+chr21	havana	CDS	41498119	41498133	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000455813"; transcript_version "1"; exon_number "2"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000391784"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2";
+chr21	havana	CDS	41494356	41494578	.	-	0	gene_id "ENSG00000184012"; gene_version "11"; transcript_id "ENST00000455813"; transcript_version "1"; exon_number "3"; gene_name "TMPRSS2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "TMPRSS2-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000391784"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "2";