Mercurial > repos > erasmus-medical-center > mycrobiota

comparison test-data/multisample.otutable @ 0:607c5e7e0a64 draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/galaxytools-emc/tree/master/tools/mycrobiota commit 1c4c58018b64ff3531a719e789ce71cb0a1244c5
author erasmus-medical-center
date Wed, 13 Dec 2017 10:09:50 -0500
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-1:000000000000 0:607c5e7e0a64
1 OTU DX01_replicate1 DX01_replicate2 DX01_replicate3 DX02_replicate1 DX02_replicate2 DX02_replicate3 NC_replicate1 NC_replicate2 NC_replicate3 Kingdom Phylum Class Order Family Genus
2 Otu0001 1025 930 1769 981 931 1154 3098 11487 7509 Bacteria Cyanobacteria Cyanobacteria SubsectionIII FamilyI Oscillatoria
3 Otu0002 0 0 0 8703 7578 9012 0 0 0 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Morganella
4 Otu0003 7700 5150 11678 1 0 1 2 0 1 Bacteria Firmicutes Clostridia Clostridiales Family_XI Anaerococcus
5 Otu0004 0 3 0 7401 5795 7061 0 0 353 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Alloprevotella
6 Otu0005 0 2 0 3978 3577 4362 0 0 0 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus
7 Otu0006 1333 1123 2015 0 0 0 0 0 0 Bacteria Firmicutes Clostridia Clostridiales Family_XI Peptoniphilus
8 Otu0007 1335 853 1941 0 0 3 0 0 0 Bacteria Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae Prevotella
9 Otu0008 946 761 1909 0 0 0 0 0 0 Bacteria Firmicutes Clostridia Clostridiales Family_XI Parvimonas
10 Otu0009 1 8 23 610 451 519 214 686 943 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus
11 Otu0010 897 614 1397 0 0 0 0 0 0 Bacteria Firmicutes Clostridia Clostridiales Family_XI Peptoniphilus
12 Otu0011 33 10 40 1 35 0 156 1205 874 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter
13 Otu0012 833 459 1020 0 0 0 0 0 0 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter
14 Otu0013 715 454 1121 4 0 0 0 0 0 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas
15 Otu0014 443 409 671 10 2 0 0 0 398 Bacteria Actinobacteria Actinobacteria Corynebacteriales Corynebacteriaceae unclassified
16 Otu0015 388 422 1015 18 0 16 0 0 0 Bacteria Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae Porphyromonas
17 Otu0016 585 390 839 0 0 0 0 0 0 Bacteria Firmicutes Clostridia Clostridiales Family_XI Peptoniphilus
18 Otu0017 0 1 0 0 1 0 0 1589 0 Bacteria Proteobacteria Alphaproteobacteria Rhodospirillales Acetobacteraceae Acetobacter
19 Otu0018 45 1 144 12 3 8 0 23 1287 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus
20 Otu0019 374 352 645 0 0 0 0 0 0 Bacteria Firmicutes Clostridia Clostridiales Family_XI Anaerococcus