Mercurial > repos > eschen42 > w4mclassfilter
diff w4mclassfilter.xml @ 9:1ced8b5dfa3e draft
planemo upload for repository https://github.com/HegemanLab/w4mclassfilter_galaxy_wrapper/tree/master commit ac7c79636d17f7d33f1e8e644db0ddd33d2057e8
author | eschen42 |
---|---|
date | Wed, 28 Mar 2018 12:04:22 -0400 |
parents | d5cf23369d12 |
children | 649cb1bafd3e |
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--- a/w4mclassfilter.xml Sat Mar 03 22:58:14 2018 -0500 +++ b/w4mclassfilter.xml Wed Mar 28 12:04:22 2018 -0400 @@ -1,4 +1,4 @@ -<tool id="w4mclassfilter" name="W4m Data Subset" version="0.98.8"> +<tool id="w4mclassfilter" name="W4m Data Subset" version="0.98.9"> <description>Filter W4m data by values or metadata</description> <!-- Here is the hyphenation standard that I *try* to apply consistently in my documentation: http://www.sandranoonan.com/dont-let-hyphenation-drive-crazy/ --> @@ -58,6 +58,7 @@ <add value=")" /> <!-- right-paren --> <add value="*" /> <!-- splat, asterisk --> <add value="+" /> <!-- plus --> + <add value="-" /> <!-- dash, hyphen --> <add value="," /> <!-- comma --> <add value="." /> <!-- dot, period --> <add value=":" /> <!-- colon --> @@ -170,10 +171,11 @@ <param name="dataMatrix_in" value="input_dataMatrix.tsv"/> <param name="sampleMetadata_in" value="input_sampleMetadata.tsv"/> <param name="variableMetadata_in" value="input_variableMetadata.tsv"/> - <param name="classnameColumn" value="class"/> - <param name="sampleclassNames" value=""/> + <param name="classnameColumn" value="sampleMetadata"/> + <!-- test that hyphens in regular expressions work --> + <param name="sampleclassNames" value="HU_[0-9][0-9][0-9]"/> <param name="wildcards" value="FALSE"/> - <param name="inclusive" value="filter-out"/> + <param name="inclusive" value="filter-in"/> <param name="variableRangeFilter" value="FEATMAX:20.93157:,mz:200:,rt::800"/> <param name="transformation" value="log2"/> <output name="dataMatrix_out"> @@ -807,6 +809,17 @@ NEWS ---- +Changes in version 0.98.9 +========================= + +New features + +- Fixed bug. + +Internal modifications + +- Added the hyphen to the characters permitted within regular expressions. + Changes in version 0.98.8 =========================