Mercurial > repos > estrain > lissero

comparison lissero.xml @ 1:accacc53938e draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author estrain
date Sun, 20 Nov 2022 23:30:00 +0000
parents 675b27bdcd6c
children 978fc524f88a
comparison
equal deleted inserted replaced
0:675b27bdcd6c 1:accacc53938e
1 <tool id="lissero" name="Serogrouping typing prediction for Listeria monocytogenes" version="0.1.0+galaxy0" python_template_version="3.5" profile="21.05"> 1 <tool id="lissero" name="lissero" version="0.1.0+galaxy0" python_template_version="3.5" profile="21.05">
2 <requirements> 2 <requirements>
3 <requirement type="package">lissero</requirement> 3 <requirement type="package">lissero</requirement>
4 </requirements> 4 </requirements>
5 <command detect_errors="exit_code"><![CDATA[ 5 <command detect_errors="exit_code"><![CDATA[
6 lissero 6 lissero
7 #if $advanced 7 #if $settings.advanced=="advanced"
8 --min_id $advanced.min_id 8 --min_id $settings.min_id
9 --min_cov $advanced.min_cov 9 --min_cov $settings.min_cov
10 #end_if_ 10 #end if
11 '$input1' > '$output1' 11 '$input1' > '$output1'
12 ]]></command> 12 ]]></command>
13 <inputs> 13 <inputs>
14 <param type="data" name="input1" format="fasta" /> 14 <param type="data" name="input1" format="fasta" />
15 <conditional name="settings"> 15 <conditional name="settings">