# HG changeset patch
# User estrain
# Date 1709082978 0
# Node ID 4f457838f4c99565d844667e45c0e65adef56b95
# Parent  dc12d6ac296ddea982b32cd6af7f49128e99881e
Fixed missing tab in MLST report

diff -r dc12d6ac296d -r 4f457838f4c9 microrunqc/microrunqc.xml
--- a/microrunqc/microrunqc.xml	Fri Feb 02 15:16:46 2024 +0000
+++ b/microrunqc/microrunqc.xml	Wed Feb 28 01:16:18 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="microrunqc" name="microrunqc" version="1.0.3">
+<tool id="microrunqc" name="microrunqc" version="1.0.4">
 
   <requirements>
     <requirement type="package" version="2.4.0">skesa</requirement>
diff -r dc12d6ac296d -r 4f457838f4c9 microrunqc/mlstAddFields.py
--- a/microrunqc/mlstAddFields.py	Fri Feb 02 15:16:46 2024 +0000
+++ b/microrunqc/mlstAddFields.py	Wed Feb 28 01:16:18 2024 +0000
@@ -21,7 +21,7 @@
     if schema == "-":
         print("\t".join(mlstout))
         return 
-
+        
     if db_path is None:
         # If no database path is provided, find it using an external command
         # This requires the 'mlst' command to be installed and available in the path
@@ -62,6 +62,8 @@
     output = mlstout[:3]
     if mlstST in schema_dict:
         output.append(schema_dict[mlstST])
+    else:
+        output.append("-")
     output.extend(mlstout[3:])
 
     print("\t".join(output))