# HG changeset patch
# User estrain
# Date 1684951077 0
# Node ID c3eb197a283b8599806021f08ccab16d8b1ad766
# Parent  d326e0177a2a7900ca116d776896ab31be515212
Uploaded

diff -r d326e0177a2a -r c3eb197a283b microrunqc.xml
--- a/microrunqc.xml	Wed May 24 17:24:37 2023 +0000
+++ b/microrunqc.xml	Wed May 24 17:57:57 2023 +0000
@@ -105,7 +105,7 @@
     #end if
     ${outname}.fasta > ${outname}.mlst_raw.tsv;
     
-    perl mlstAddFields.pl ${outname}.mlst_raw.tsv > ${outname}.mlst.tsv;
+    perl $__tool_directory__/mlstAddFields.pl ${outname}.mlst_raw.tsv > ${outname}.mlst.tsv;
 
     python $__tool_directory__/run_fastq_scan.py --fastq ${bwalist} --out fq_out.tab --type ${fqscan};