# HG changeset patch
# User estrain
# Date 1645626940 0
# Node ID b3d943bc70aeaf699cfc1020a5f09eaaff0f6b90
# Parent  5a9a44e23dad6994fea7f79a95a60b9aba6305fd
Uploaded

diff -r 5a9a44e23dad -r b3d943bc70ae sum_fastqc.pl
--- a/sum_fastqc.pl	Fri Oct 19 14:23:35 2018 -0400
+++ b/sum_fastqc.pl	Wed Feb 23 14:35:40 2022 +0000
@@ -123,8 +123,12 @@
 
    foreach $item (@larray) {
      my($lenrange,$count)=split(/\t/,$item);
-     my($l1,$l2)=split(/\-/,$lenrange);
-     $sum+=(($l1+$l2)/2)*$count; 
+     my(@lvals)=split(/\-/,$lenrange);
+     if(@lvals==2) {
+       $sum+=(($lvals[0]+$lvals[1])/2)*$count; 
+     } else {
+       $sum+=($lvals[0])*$count; 
+     }
    }
    $sum = sprintf("%.1f",$sum/$nreads);
    return $sum;