Mercurial > repos > ethevenot > biosigner

comparison runit/biosigner_tests.R @ 2:b2414be87d4b draft

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planemo upload for repository https://github.com/workflow4metabolomics/biosigner.git commit d85321a93588817e9e8884b90dde6331292bbe79
author ethevenot
date Sat, 06 Aug 2016 12:17:12 -0400
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1:4ff502a46189 2:b2414be87d4b
1 test_sacurine_default <- function() {
2
3 testDirC <- "sacurine"
4 argLs <- list(respC = "gender",
5 methodC = "all",
6 bootI = "5",
7 pvalN = "0.05",
8 seedI = "123")
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10 argLs <- c(defaultArgF(testDirC), argLs)
11 outLs <- wrapperCallF(argLs)
12
13 checkEquals(outLs[["varDF"]]["Oxoglutaric acid", "gender_tier_S"], "plsda|randomforest|svm")
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15 }