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planemo upload for repository https://github.com/workflow4metabolomics/multivariate.git commit 0f382a5296aae9bfc77df06b0a5ad493eb3c01f3
author ethevenot
date Wed, 28 Feb 2018 09:59:25 -0500
parents fa173e12e185
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Start of the 'Multivariate' Galaxy module call: Mon 08 Jan 2018 05:24:55 PM

PLS-DA

100 samples x 109 variables and 1 response

standard scaling of dataMatrix and response

      R2X R2X(cum)   R2Y R2Y(cum)      Q2 Q2(cum) Signif. Iter.
p1 0.0505   0.0505 0.664    0.664  0.4220   0.422      R1     1
p2 0.0678   0.1180 0.105    0.769 -0.0431   0.397      NS     1

End of 'Multivariate' Galaxy module call: 2018-01-08 17:24:56



============================================================================
Additional information about the call:

1) Parameters:
                     value                                
dataMatrix_in        "./sacurineTest/dataMatrix.tsv"      
sampleMetadata_in    "./sacurineTest/sampleMetadata.tsv"  
variableMetadata_in  "./sacurineTest/variableMetadata.tsv"
sampleMetadata_out   "./output/sampleMetadata.tsv"        
variableMetadata_out "./output/variableMetadata.tsv"      
figure               "./output/figure.pdf"                
information          "./output/information.txt"           
respC                "gender"                             
predI                "2"                                  
orthoI               "0"                                  
testL                "TRUE"                               
parAsColC            "none"                               
parMahalC            "gender"                             
parLabVc             "none"                               

2) Session Info:
R version 3.3.1 (2016-06-21) 
Main packages:
ropls 1.6.2 	batch 1.1.4 	
Other loaded packages:
parallel 3.3.1 	Biobase 2.34.0 	methods 3.3.1 	BiocGenerics 0.20.0 	
============================================================================