Mercurial > repos > ethevenot > profia

comparison README.md @ 1:4753e64cf694 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/workflow4metabolomics/profia.git commit 0a90b8ee1577263ace397124d8b0e34d1e630f51
author ethevenot
date Wed, 03 May 2017 10:49:08 -0400
parents 39ccace77270
children 3f8ae071bdda
comparison
equal deleted inserted replaced
0:39ccace77270 1:4753e64cf694
5 5
6 Status: [![Build Status](https://travis-ci.org/workflow4metabolomics/profia.svg?branch=master)](https://travis-ci.org/workflow4metabolomics/profia). 6 Status: [![Build Status](https://travis-ci.org/workflow4metabolomics/profia.svg?branch=master)](https://travis-ci.org/workflow4metabolomics/profia).
7 7
8 ### Description 8 ### Description
9 9
10 **Version:** 3.0.0 10 **Version:** 3.0.4
11 **Date:** 2017-03-21 11 **Date:** 2017-05-02
12 **Author:** Alexis Delabriere and Etienne A. Thevenot (CEA, LIST, MetaboHUB, W4M Core Development Team) 12 **Author:** Alexis Delabriere and Etienne A. Thevenot (CEA, LIST, MetaboHUB, W4M Core Development Team)
13 **Email:** [etienne.thevenot(at)cea.fr](mailto:etienne.thevenot@cea.fr) 13 **Email:** [etienne.thevenot(at)cea.fr](mailto:etienne.thevenot@cea.fr)
14 **Citation:** Delabriere A., Hohenester U., Junot C. and Thevenot E.A. proFIA: A data preprocessing workflow for Flow Injection Analysis coupled to High-Resolution Mass Spectrometry. *submitted*. 14 **Citation:** Delabriere A., Hohenester U., Colsch B., Junot C., Fenaille F. and Thevenot E.A. proFIA: A data preprocessing workflow for Flow Injection Analysis coupled to High-Resolution Mass Spectrometry. *submitted*.
15 **Licence:** CeCILL 15 **Licence:** CeCILL
16 **Reference history:** 16 **Reference history:**
17 **Funding:** Agence Nationale de la Recherche ([MetaboHUB](http://www.metabohub.fr/index.php?lang=en&Itemid=473) national infrastructure for metabolomics and fluxomics, ANR-11-INBS-0010 grant) 17 **Funding:** Agence Nationale de la Recherche ([MetaboHUB](http://www.metabohub.fr/index.php?lang=en&Itemid=473) national infrastructure for metabolomics and fluxomics, ANR-11-INBS-0010 grant)
18 18
19 ### Installation 19 ### Installation
36 + **profia** from Bioconductor 36 + **profia** from Bioconductor
37 37
38 ```r 38 ```r
39 source("http://www.bioconductor.org/biocLite.R") 39 source("http://www.bioconductor.org/biocLite.R")
40 biocLite("xcms") 40 biocLite("xcms")
41 biocLite("plasFIA")
41 biocLite("proFIA") 42 biocLite("proFIA")
42 biocLite("plasFIA")
43 ``` 43 ```
44 44
45 ### Tests 45 ### Tests
46 46
47 The code in the wrapper can be tested by running the `runit/profia_runtests.R` R file 47 The code in the wrapper can be tested by running the `runit/profia_runtests.R` R file
51 install.packages('RUnit', dependencies = TRUE) 51 install.packages('RUnit', dependencies = TRUE)
52 ``` 52 ```
53 53
54 ### Working example 54 ### Working example
55 55
56 ### News 56 ### News
57
58 ###### CHANGES IN VERSION 3.0.4
59
60 MINOR MODIFICATION
61
62 * Details added in the documentation
63
64 ###### CHANGES IN VERSION 3.0.2
65
66 NEW FEATURE
67
68 * Parallel processing
57 69
58 ###### CHANGES IN VERSION 3.0.0 70 ###### CHANGES IN VERSION 3.0.0
59 71
60 NEW FEATURE 72 NEW FEATURE
61 73