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planemo upload for repository https://github.com/workflow4metabolomics/profia.git commit 19ed25c048232776369a392ddb8c1860471acd29
author ethevenot
date Mon, 22 Jan 2018 11:32:41 -0500
parents 39ccace77270
children
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test_plasfia_default <- function() {

    testDirC <- "plasfia"
    argLs <- list(zipfile = "./plasfia/plasFIA.zip",
                  library = "NULL",
                  ppmN = "2",
                  dmzN = "0.0005",
                  ppmGroupN = "1",
                  dmzGroupN = "0.0005",
                  fracGroupN = "0.1",
                  imputeC = "randomForest")

    argLs <- c(defaultArgF(testDirC), argLs)
    outLs <- wrapperCallF(argLs)

    checkEqualsNumeric(outLs[["datMN"]]["C100a", "M86.0965"], 1365657.4687182, tolerance = 1e-7)

}