Mercurial > repos > ethevenot > univariate

annotate runit/output/information.txt @ 4:3017385625f6 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
author ethevenot
date Thu, 11 Jan 2018 10:21:17 -0500
parents 140290de7986
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2
09799fc16bc6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 2c0d4d97c208edca1ada2035a7b7af9c4eb31afe
ethevenot
parents:
diff changeset
1
4
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
2 Start of the 'Univariate' Galaxy module call: Sat 03 Jun 2017 11:00:34 PM
2
09799fc16bc6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 2c0d4d97c208edca1ada2035a7b7af9c4eb31afe
ethevenot
parents:
diff changeset
3
09799fc16bc6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 2c0d4d97c208edca1ada2035a7b7af9c4eb31afe
ethevenot
parents:
diff changeset
4 Performing 'kruskal'
09799fc16bc6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 2c0d4d97c208edca1ada2035a7b7af9c4eb31afe
ethevenot
parents:
diff changeset
5
3
140290de7986 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 27bc6157f43574f038b3fb1be1f46ce4786e24b1
ethevenot
parents: 2
diff changeset
6 The following 3 variables (50%) were found significant at the 0.05 level:
140290de7986 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 27bc6157f43574f038b3fb1be1f46ce4786e24b1
ethevenot
parents: 2
diff changeset
7 v4
140290de7986 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 27bc6157f43574f038b3fb1be1f46ce4786e24b1
ethevenot
parents: 2
diff changeset
8 v5
140290de7986 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 27bc6157f43574f038b3fb1be1f46ce4786e24b1
ethevenot
parents: 2
diff changeset
9 v6
2
09799fc16bc6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit 2c0d4d97c208edca1ada2035a7b7af9c4eb31afe
ethevenot
parents:
diff changeset
10
4
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
11 End of 'Univariate' Galaxy module call: 2017-06-03 23:00:34
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
12
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
13
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
14
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
15 ============================================================================
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
16 Additional information about the call:
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
17
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
18 1) Parameters:
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
19 value
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
20 dataMatrix_in "./input/dataMatrix.tsv"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
21 sampleMetadata_in "./input/sampleMetadata.tsv"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
22 variableMetadata_in "./input/variableMetadata.tsv"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
23 variableMetadata_out "./output/variableMetadata.tsv"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
24 figure "./output/figure.pdf"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
25 information "./output/information.txt"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
26 facC "qual"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
27 tesC "kruskal"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
28 adjC "fdr"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
29 thrN "0.05"
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
30
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
31 2) Session Info:
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
32 R version 3.3.1 (2016-06-21)
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
33 Platform: x86_64-pc-linux-gnu (64-bit)
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
34 Running under: Ubuntu 16.04.1 LTS
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
35
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
36 locale:
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
37 [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
38 [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
39 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
40 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
41 [9] LC_ADDRESS=C LC_TELEPHONE=C
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
42 [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
43
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
44 attached base packages:
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
45 [1] stats graphics grDevices utils datasets base
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
46
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
47 other attached packages:
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
48 [1] PMCMR_4.1 batch_1.1-4
3017385625f6 planemo upload for repository https://github.com/workflow4metabolomics/univariate.git commit a81d4cc1df719dcc66def660927abda74972afaa
ethevenot
parents: 3
diff changeset
49 ============================================================================