annotate test-data/phiX.fasta @ 2:3a001705dc94 draft default tip

Uploaded
author evan
date Fri, 06 Jun 2014 12:55:09 -0400
parents 8d92246f41bb
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
8d92246f41bb Uploaded
evan
parents:
diff changeset
1 >phiX174
8d92246f41bb Uploaded
evan
parents:
diff changeset
2 GAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGAGTCGAAAAATTATCTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
3 GATAAAGCAGGAATTACTACTGCTTGTTTACGAATTAAATCGAAGTGGACTGCTGGCGGAAAATGAGAAA
8d92246f41bb Uploaded
evan
parents:
diff changeset
4 ATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTACTTTGCGACCTTTCGCCATCAACTAACGATTCTG
8d92246f41bb Uploaded
evan
parents:
diff changeset
5 TCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGCACGTTCGTCAAGGACTGGTTTA
8d92246f41bb Uploaded
evan
parents:
diff changeset
6 GATATGAGTCACATTTTGTTCATGGTAGAGATTCTCTTGTTGACATTTTAAAAGAGCGTGGATTACTATC
8d92246f41bb Uploaded
evan
parents:
diff changeset
7 TGAGTCCGATGCTGTTCAACCACTAATAGGTAAGAAATCATGAGTCAAGTTACTGAACAATCCGTACGTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
8 TCCAGACCGCTTTGGCCTCTATTAAGCTCATTCAGGCTTCTGCCGTTTTGGATTTAACCGAAGATGATTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
9 CGATTTTCTGACGAGTAACAAAGTTTGGATTGCTACTGACCGCTCTCGTGCTCGTCGCTGCGTTGAGGCT
8d92246f41bb Uploaded
evan
parents:
diff changeset
10 TGCGTTTATGGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTCCTGTTGAGTTTATTGCTGCCG
8d92246f41bb Uploaded
evan
parents:
diff changeset
11 TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATCATGGAAGGCGCTGAATTTAC
8d92246f41bb Uploaded
evan
parents:
diff changeset
12 GGAAAACATTATTAATGGCGTCGAGCGTCCGGTTAAAGCCGCTGAATTGTTCGCGTTTACCTTGCGTGTA
8d92246f41bb Uploaded
evan
parents:
diff changeset
13 CGCGCAGGAAACACTGACGTTCTTACTGACGCAGAAGAAAACGTGCGTCAAAAATTACGTGCAGAAGGAG
8d92246f41bb Uploaded
evan
parents:
diff changeset
14 TGATGTAATGTCTAAAGGTAAAAAACGTTCTGGCGCTCGCCCTGGTCGTCCGCAGCCGTTGCGAGGTACT
8d92246f41bb Uploaded
evan
parents:
diff changeset
15 AAAGGCAAGCGTAAAGGCGCTCGTCTTTGGTATGTAGGTGGTCAACAATTTTAATTGCAGGGGCTTCGGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
16 CCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAGCGTATGCCGCATGACCTTTCCCA
8d92246f41bb Uploaded
evan
parents:
diff changeset
17 TCTTGGCTTCCTTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATCGCTGGCGAC
8d92246f41bb Uploaded
evan
parents:
diff changeset
18 TCCTTCGAGATGGACGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTGACTCTA
8d92246f41bb Uploaded
evan
parents:
diff changeset
19 CTGTAGACATTTTTACTTTTTATGTCCCTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAA
8d92246f41bb Uploaded
evan
parents:
diff changeset
20 GGATGGTGTTAATGCCACTCCTCTCCCGACTGTTAACACTACTGGTTATATTGACCATGCCGCTTTTCTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
21 GGCACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTGTTTCAGGGTTATTTGAATATCTATAACA
8d92246f41bb Uploaded
evan
parents:
diff changeset
22 ACTATTTTAAAGCGCCGTGGATGCCTGACCGTACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
23 TCGTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
24 TCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTCTGCAAGCTGCTTATGCTAATTTGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
25 ATACTGACCAAGAACGTGATTACTTCATGCAGCGTTACCGTGATGTTATTTCTTCATTTGGAGGTAAAAC
8d92246f41bb Uploaded
evan
parents:
diff changeset
26 CTCTTATGACGCTGACAACCGTCCTTTACTTGTCATGCGCTCTAATCTCTGGGCATCTGGCTATGATGTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
27 GATGGAACTGACCAAACGTCGTTAGGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
28 CGCGTTTCTTTGTTCCTGAGCATGGCACTATGTTTACTCTTGCGCTTGTTCGTTTTCCGCCTACTGCGAC
8d92246f41bb Uploaded
evan
parents:
diff changeset
29 TAAAGAGATTCAGTACCTTAACGCTAAAGGTGCTTTGACTTATACCGATATTGCTGGCGACCCTGTTTTG
8d92246f41bb Uploaded
evan
parents:
diff changeset
30 TATGGCAACTTGCCGCCGCGTGAAATTTCTATGAAGGATGTTTTCCGTTCTGGTGATTCGTCTAAGAAGT
8d92246f41bb Uploaded
evan
parents:
diff changeset
31 TTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATGTTTCTCCTGCTTATCACCTTCTTGA
8d92246f41bb Uploaded
evan
parents:
diff changeset
32 AGGCTTCCCATTCATTCAGGAACCGCCTTCTGGTGATTTGCAAGAACGCGTACTTATTCGCCACCATGAT
8d92246f41bb Uploaded
evan
parents:
diff changeset
33 TATGACCAGTGTTTCCAGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
34 ATCGCAATCTGCCGACCACTCGCGATTCAATCATGACTTCGTGATAAAAGATTGAGTGTGAGGTTATAAC
8d92246f41bb Uploaded
evan
parents:
diff changeset
35 GCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
36 TTAGGAGTTTAATCATGTTTCAGACTTTTATTTCTCGCCATAATTCAAACTTTTTTTCTGATAAGCTGGT
8d92246f41bb Uploaded
evan
parents:
diff changeset
37 TCTCACTTCTGTTACTCCAGCTTCTTCGGCACCTGTTTTACAGACACCTAAAGCTACATCGTCAACGTTA
8d92246f41bb Uploaded
evan
parents:
diff changeset
38 TATTTTGATAGTTTGACGGTTAATGCTGGTAATGGTGGTTTTCTTCATTGCATTCAGATGGATACATCTG
8d92246f41bb Uploaded
evan
parents:
diff changeset
39 TCAACGCCGCTAATCAGGTTGTTTCTGTTGGTGCTGATATTGCTTTTGATGCCGACCCTAAATTTTTTGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
40 CTGTTTGGTTCGCTTTGAGTCTTCTTCGGTTCCGACTACCCTCCCGACTGCCTATGATGTTTATCCTTTG
8d92246f41bb Uploaded
evan
parents:
diff changeset
41 AATGGTCGCCATGATGGTGGTTATTATACCGTCAAGGACTGTGTGACTATTGACGTCCTTCCCCGTACGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
42 CGGGCAATAATGTTTATGTTGGTTTCATGGTTTGGTCTAACTTTACCGCTACTAAATGCCGCGGATTGGT
8d92246f41bb Uploaded
evan
parents:
diff changeset
43 TTCGCTGAATCAGGTTATTAAAGAGATTATTTGTCTCCAGCCACTTAAGTGAGGTGATTTATGTTTGGTG
8d92246f41bb Uploaded
evan
parents:
diff changeset
44 CTATTGCTGGCGGTATTGCTTCTGCTCTTGCTGGTGGCGCCATGTCTAAATTGTTTGGAGGCGGTCAAAA
8d92246f41bb Uploaded
evan
parents:
diff changeset
45 AGCCGCCTCCGGTGGCATTCAAGGTGATGTGCTTGCTACCGATAACAATACTGTAGGCATGGGTGATGCT
8d92246f41bb Uploaded
evan
parents:
diff changeset
46 GGTATTAAATCTGCCATTCAAGGCTCTAATGTTCCTAACCCTGATGAGGCCGCCCCTAGTTTTGTTTCTG
8d92246f41bb Uploaded
evan
parents:
diff changeset
47 GTGCTATGGCTAAAGCTGGTAAAGGACTTCTTGAAGGTACGTTGCAGGCTGGCACTTCTGCCGTTTCTGA
8d92246f41bb Uploaded
evan
parents:
diff changeset
48 TAAGTTGCTTGATTTGGTTGGACTTGGTGGCAAGTCTGCCGCTGATAAAGGAAAGGATACTCGTGATTAT
8d92246f41bb Uploaded
evan
parents:
diff changeset
49 CTTGCTGCTGCATTTCCTGAGCTTAATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGG
8d92246f41bb Uploaded
evan
parents:
diff changeset
50 TTGACGCCGGATTTGAGAATCAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGA
8d92246f41bb Uploaded
evan
parents:
diff changeset
51 GATGCAAAATGAGACTCAAAAAGAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGAC
8d92246f41bb Uploaded
evan
parents:
diff changeset
52 CAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTATTA
8d92246f41bb Uploaded
evan
parents:
diff changeset
53 TGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTCCGAGATTATGCGCCAAATGCTTACTCAAGCTCA
8d92246f41bb Uploaded
evan
parents:
diff changeset
54 AACGGCTGGTCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGAC
8d92246f41bb Uploaded
evan
parents:
diff changeset
55 TTAGTTCATCAGCAAACGCAGAATCAGCGGTATGGCTCTTCTCATATTGGCGCTACTGCAAAGGATATTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
56 CTAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTTCATGGTATTGATAAAGCTGTTGCCGA
8d92246f41bb Uploaded
evan
parents:
diff changeset
57 TACTTGGAACAATTTCTGGAAAGACGGTAAAGCTGATGGTATTGGCTCTAATTTGTCTAGGAAATAACCG
8d92246f41bb Uploaded
evan
parents:
diff changeset
58 TCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTTGGAGGCTTTTTTATGGTTCGTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
59 CTTATTACCCTTCTGAATGTCACGCTGATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTAT
8d92246f41bb Uploaded
evan
parents:
diff changeset
60 TGAGGCTTGTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAGCAGATGGATAACCGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
61 ATCAAGCTCTTGGAAGAGATTCTGTCTTTTCGTATGCAGGGCGTTGAGTTCGATAATGGTGATATGTATG
8d92246f41bb Uploaded
evan
parents:
diff changeset
62 TTGACGGCCATAAGGCTGCTTCTGACGTTCGTGATGAGTTTGTATCTGTTACTGAGAAGTTAATGGATGA
8d92246f41bb Uploaded
evan
parents:
diff changeset
63 ATTGGCACAATGCTACAATGTGCTCCCCCAACTTGATATTAATAACACTATAGACCACCGCCCCGAAGGG
8d92246f41bb Uploaded
evan
parents:
diff changeset
64 GACGAAAAATGGTTTTTAGAGAACGAGAAGACGGTTACGCAGTTTTGCCGCAAGCTGGCTGCTGAACGCC
8d92246f41bb Uploaded
evan
parents:
diff changeset
65 CTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATGAGTGTTCAAGATT
8d92246f41bb Uploaded
evan
parents:
diff changeset
66 GCTGGAGGCCTCCACTATGAAATCGCGTAGAGGCTTTACTATTCAGCGTTTGATGAATGCAATGCGACAG
8d92246f41bb Uploaded
evan
parents:
diff changeset
67 GCTCATGCTGATGGTTGGTTTATCGTTTTTGACACTCTCACGTTGGCTGACGACCGATTAGAGGCGTTTT
8d92246f41bb Uploaded
evan
parents:
diff changeset
68 ATGATAATCCCAATGCTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCG
8d92246f41bb Uploaded
evan
parents:
diff changeset
69 CAAGGCTAATGATTCACACGCCGACTGCTATCAGTATTTTTGTGTGCCTGAGTATGGTACAGCTAATGGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
70 CGTCTTCATTTCCATGCGGTGCATTTTATGCGGACACTTCCTACAGGTAGCGTTGACCCTAATTTTGGTC
8d92246f41bb Uploaded
evan
parents:
diff changeset
71 GTCGGGTACGCAATCGCCGCCAGTTAAATAGCTTGCAAAATACGTGGCCTTATGGTTACAGTATGCCCAT
8d92246f41bb Uploaded
evan
parents:
diff changeset
72 CGCAGTTCGCTACACGCAGGACGCTTTTTCACGTTCTGGTTGGTTGTGGCCTGTTGATGCTAAAGGTGAG
8d92246f41bb Uploaded
evan
parents:
diff changeset
73 CCGCTTAAAGCTACCAGTTATATGGCTGTTGGTTTCTATGTGGCTAAATACGTTAACAAAAAGTCAGATA
8d92246f41bb Uploaded
evan
parents:
diff changeset
74 TGGACCTTGCTGCTAAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTCGCTACT
8d92246f41bb Uploaded
evan
parents:
diff changeset
75 TCCCAAGAAGCTGTTCAGAATCAGAATGAGCCGCAACTTCGGGATGAAAATGCTCACAATGACAAATCTG
8d92246f41bb Uploaded
evan
parents:
diff changeset
76 TCCACGGAGTGCTTAATCCAACTTACCAAGCTGGGTTACGACGCGACGCCGTTCAACCAGATATTGAAGC
8d92246f41bb Uploaded
evan
parents:
diff changeset
77 AGAACGCAAAAAGAGAGATGAGATTGAGGCTGGGAAAAGTTACTGTAGCCGACGTTTTGGCGGCGCAACC
8d92246f41bb Uploaded
evan
parents:
diff changeset
78 TGTGACGACAAATCTGCTCAAATTTATGCGCGCTTCGATAAAAATGATTGGCGTATCCAACCTGCA
8d92246f41bb Uploaded
evan
parents:
diff changeset
79