# HG changeset patch # User fabio # Date 1551709516 18000 # Node ID c619ad82600e53d93a961ebca69e27917852ba5c # Parent 1dc3f0c6181721fa2390e247c07320e8aaee4190 Uploaded 20190304 diff -r 1dc3f0c61817 -r c619ad82600e query.py --- a/query.py Mon Mar 04 09:14:04 2019 -0500 +++ b/query.py Mon Mar 04 09:25:16 2019 -0500 @@ -81,7 +81,7 @@ sort_param = '--sort' if options.sort == 0: sort_param = '' - query_exitcode = os.system( 'howdesbt query --tree=' + os.path.abspath( tree_def_filepath ) + ' ' + os.path.abspath( batch_file_name ) + '=' + str(options.threshold) + ' --out=' + query_res_file_path ) + ' ' + sort_param + query_exitcode = os.system( 'howdesbt query --tree=' + os.path.abspath( tree_def_filepath ) + ' ' + os.path.abspath( batch_file_name ) + '=' + str(options.threshold) + ' --out=' + query_res_file_path + ' ' + sort_param ) if query_exitcode > 0: printLog( outlogfile, '> ERROR: an error has occurred while querying the tree with the sequence [id: ' + seq_id + '] in input file ' + file_names[ idx ] ) else: