Mercurial > repos > fabio > iwtomics
diff testandplot.xml @ 72:a3bfaf944f73 draft
Uploaded 20170614
author | fabio |
---|---|
date | Wed, 14 Jun 2017 15:20:32 -0400 |
parents | 39e7294c66e1 |
children | 2bb6b44093ba |
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--- a/testandplot.xml Wed Jun 14 13:58:04 2017 -0400 +++ b/testandplot.xml Wed Jun 14 15:20:32 2017 -0400 @@ -20,16 +20,16 @@ featureids='${featureids}' rdatafile='${rdata}' - #set region1 = '","'.join( [ str( $r.region0 ) for $r in $regionssection.regions ] ) - #set region2 = '","'.join( [ str( $r.region1 ) for $r in $regionssection.regions ] ) + #set region1 = ','.join( [ str( $r.region0 ) for $r in $regionssection.regions ] ) + #set region2 = ','.join( [ str( $r.region1 ) for $r in $regionssection.regions ] ) region1='c(${region1})' region2='c(${region2})' features_subset='c(${featureslist})' - statistics='${conditionalstatistics.statistics}' + statistics="'${conditionalstatistics.statistics}'" #if $conditionalstatistics.statistics == "quantile": - #set probabilities = '","'.join( [ str( $p.qprob ) for $p in $conditionalstatistics.quantilesection.qprobabilities ] ) + #set probabilities = ','.join( [ str( $p.qprob ) for $p in $conditionalstatistics.quantilesection.qprobabilities ] ) testprobs='c(${probabilities})' #end if @@ -38,9 +38,9 @@ testalpha='${plotres.alpha}' average='${plotres.average}' size='${plotres.size}' - plottype='${plotres.conditionalplottype.plottype}' - #if $plotres.conditionalplottype.plottype == 'boxplot': - #set probs = '","'.join( [ str( $p.prob ) for $p in $plotres.conditionalplottype.probabilitiessection.probabilities ] ) + plottype="'${plotres.conditionalplottype.plottype}'" + #if $plotres.conditionalplottype.plottype == "boxplot": + #set probs = ','.join( [ str( $p.prob ) for $p in $plotres.conditionalplottype.probabilitiessection.probabilities ] ) #if $probs != "": probs='c(${plotres.conditionalplottype.probabilitiessection.prob0},${plotres.conditionalplottype.probabilitiessection.prob1},${plotres.conditionalplottype.probabilitiessection.prob2},${probs})' #else: @@ -48,7 +48,7 @@ #end if #end if - groupby='${plotsum.conditionalgroupby.groupby}' + groupby="'${plotsum.conditionalgroupby.groupby}'" #if $plotsum.conditionalgroupby.groupby == "test": summaryalpha='${plotsum.conditionalgroupby.testalphaplot}' only_significant='${plotsum.conditionalgroupby.testonlysig}'