# HG changeset patch
# User fabio
# Date 1497978871 14400
# Node ID 5893ad34d0ac7bf640acbe15ed08e0a66fb3ce86
# Parent  acf45085f9d4b1d807c606f9726f0ca1332cdfa3
Uploaded 20170620

diff -r acf45085f9d4 -r 5893ad34d0ac ._loadandplot.R
Binary file ._loadandplot.R has changed
diff -r acf45085f9d4 -r 5893ad34d0ac ._plotwithscale.R
Binary file ._plotwithscale.R has changed
diff -r acf45085f9d4 -r 5893ad34d0ac ._testandplot.R
Binary file ._testandplot.R has changed
diff -r acf45085f9d4 -r 5893ad34d0ac loadandplot.xml
--- a/loadandplot.xml	Tue Jun 20 13:08:20 2017 -0400
+++ b/loadandplot.xml	Tue Jun 20 13:14:31 2017 -0400
@@ -3,7 +3,7 @@
   <macros>
     <import>macros.xml</import>
   </macros>
-  <!--<expand macro="requirements" />-->
+  <expand macro="requirements" />
 
   <command detect_errors="exit_code">
 <![CDATA[
diff -r acf45085f9d4 -r 5893ad34d0ac plotwithscale.xml
--- a/plotwithscale.xml	Tue Jun 20 13:08:20 2017 -0400
+++ b/plotwithscale.xml	Tue Jun 20 13:14:31 2017 -0400
@@ -3,7 +3,7 @@
   <macros>
     <import>macros.xml</import>
   </macros>
-  <!--<expand macro="requirements" />-->
+  <expand macro="requirements" />
   
   <command detect_errors="exit_code">
 <![CDATA[
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/._.DS_Store
Binary file test-data/._.DS_Store has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._Controls_regions.bed
Binary file test-data/input/._Controls_regions.bed has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._Elements1_regions.bed
Binary file test-data/input/._Elements1_regions.bed has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._Elements2_regions.bed
Binary file test-data/input/._Elements2_regions.bed has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._Elements3_regions.bed
Binary file test-data/input/._Elements3_regions.bed has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._Feature1.bed
Binary file test-data/input/._Feature1.bed has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._Feature2.bed
Binary file test-data/input/._Feature2.bed has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._features.header.bed.txt
Binary file test-data/input/._features.header.bed.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/input/._regions.header.txt
Binary file test-data/input/._regions.header.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_loadandplot/._iwtomics.loadandplot.RData
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.RData has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_loadandplot/._iwtomics.loadandplot.features.txt
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.features.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_loadandplot/._iwtomics.loadandplot.pdf
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.pdf has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_loadandplot/._iwtomics.loadandplot.regions.txt
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.regions.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_plotwithscale/._iwtomics.plotwithscale.adjustedpvalue.txt
Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.adjustedpvalue.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_plotwithscale/._iwtomics.plotwithscale.iwtomicstestresults.pdf
Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.iwtomicstestresults.pdf has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_plotwithscale/._iwtomics.plotwithscale.summaryplot.pdf
Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.summaryplot.pdf has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_testandplot/._iwtomics.testandplot.RData
Binary file test-data/output_testandplot/._iwtomics.testandplot.RData has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_testandplot/._iwtomics.testandplot.adjustedpvalue.matrix.txt
Binary file test-data/output_testandplot/._iwtomics.testandplot.adjustedpvalue.matrix.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_testandplot/._iwtomics.testandplot.iwtomicstestresults.pdf
Binary file test-data/output_testandplot/._iwtomics.testandplot.iwtomicstestresults.pdf has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_testandplot/._iwtomics.testandplot.selectedfeatures.txt
Binary file test-data/output_testandplot/._iwtomics.testandplot.selectedfeatures.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_testandplot/._iwtomics.testandplot.summaryplot.pdf
Binary file test-data/output_testandplot/._iwtomics.testandplot.summaryplot.pdf has changed
diff -r acf45085f9d4 -r 5893ad34d0ac test-data/output_testandplot/._iwtomics.testandplot.tests.txt
Binary file test-data/output_testandplot/._iwtomics.testandplot.tests.txt has changed
diff -r acf45085f9d4 -r 5893ad34d0ac testandplot.xml
--- a/testandplot.xml	Tue Jun 20 13:08:20 2017 -0400
+++ b/testandplot.xml	Tue Jun 20 13:14:31 2017 -0400
@@ -3,7 +3,7 @@
   <macros>
     <import>macros.xml</import>
   </macros>
-  <!--<expand macro="requirements" />-->
+  <expand macro="requirements" />
 
   <command detect_errors="exit_code">
 <![CDATA[