changeset 38:fcc0eb90fb07 draft

Uploaded 20170531
author fabio
date Wed, 31 May 2017 12:50:22 -0400
parents 8e19da0956a7
children 844a71b6043a
files ._ETn_example ._example ._loadandplot.R ._plotwithscale.R ._testandplot.R ETn_example/._.DS_Store ETn_example/._Control.bed ETn_example/._DESCRIPTION.txt ETn_example/._ETn_fixed.bed ETn_example/._Recombination_hotspots.txt ETn_example/._features.header ETn_example/._regions.header example/._.DS_Store example/._Controls_regions.bed example/._DESCRIPTION.txt example/._Elements1_regions.bed example/._Elements2_regions.bed example/._Elements3_regions.bed example/._Feature1.bed example/._Feature2.bed example/._features.header.bed.txt example/._regions.header.txt loadandplot.R
diffstat 23 files changed, 5 insertions(+), 6 deletions(-) [+]
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Binary file ._ETn_example has changed
Binary file ._example has changed
Binary file ._loadandplot.R has changed
Binary file ._plotwithscale.R has changed
Binary file ._testandplot.R has changed
Binary file ETn_example/._.DS_Store has changed
Binary file ETn_example/._Control.bed has changed
Binary file ETn_example/._DESCRIPTION.txt has changed
Binary file ETn_example/._ETn_fixed.bed has changed
Binary file ETn_example/._Recombination_hotspots.txt has changed
Binary file ETn_example/._features.header has changed
Binary file ETn_example/._regions.header has changed
Binary file example/._.DS_Store has changed
Binary file example/._Controls_regions.bed has changed
Binary file example/._DESCRIPTION.txt has changed
Binary file example/._Elements1_regions.bed has changed
Binary file example/._Elements2_regions.bed has changed
Binary file example/._Elements3_regions.bed has changed
Binary file example/._Feature1.bed has changed
Binary file example/._Feature2.bed has changed
Binary file example/._features.header.bed.txt has changed
Binary file example/._regions.header.txt has changed
--- a/loadandplot.R	Wed May 31 12:46:08 2017 -0400
+++ b/loadandplot.R	Wed May 31 12:50:22 2017 -0400
@@ -1,5 +1,4 @@
-library("IWTomics", quietly=TRUE, warn.conflicts=FALSE,verbose = FALSE)
-#if (require("IWTomics",character.only = TRUE,quietly = FALSE)) {
+if (require("IWTomics",character.only = TRUE,quietly = FALSE)) {
   args=commandArgs(TRUE)
   
   # get args names and values
@@ -136,7 +135,7 @@
               #file=outfeatures,quote=FALSE,sep='\t',row.names=FALSE,col.names=FALSE)
   write.table(as.data.frame(t(idFeatures(regionsFeatures))),file=outfeatures,quote=FALSE,sep='\t',row.names=FALSE,col.names=FALSE)
   save(regionsFeatures,file=outrdata)
-#}else{
-  #quit(save="no", status=255)
-  #stop("Missing IWTomics package")
-#}
\ No newline at end of file
+}else{
+  quit(save="no", status=255)
+  stop("Missing IWTomics package")
+}
\ No newline at end of file