view trait_db.loc.sample @ 0:7a7ecf9b9df7 draft

Initial upload
author fangly
date Mon, 29 Jul 2013 06:52:36 -0400
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# File of pre-defined trait databases for CopyRighter
#
# This file defines the locations and of available database files of microbial
# traits needed to run CopyRighter. Edit this file by adding the name and
# location of the databases you want (tab-delimited!) and move the file to the
# tool-data/ directory. Then add this to your tool_data_table_conf.xml file:
#
#    <!-- Locations of database files for CopyRighter -->
#    <table name="trait_db" comment_char="#">
#        <columns>id, name, value</columns>
#        <file path="tool-data/trait_db.loc" />
#    </table>
#

# id	name	path
ssu_img40_gg201210	Short ribosomal subunit (16S) data (IMG 4.0, Greengenes 2012/10)	/path/to/ssu_img40_gg201210.txt
genlength_img40_gg201210	Genome length data (IMG 4.0, Greengenes 2012/10)	/path/to/genlength_img40_gg201210.txt
test_invalid	Invalid database	/path/to/db.txt