diff conf.cfg @ 2:be504ccbc41c draft default tip

master branch Updating with tag :CI_COMMIT_TAG - - Fxx
author fgiacomoni
date Wed, 30 Nov 2022 16:14:27 +0000
parents 7c9269bded0e
children
line wrap: on
line diff
--- a/conf.cfg	Tue Jan 21 16:09:45 2020 -0500
+++ b/conf.cfg	Wed Nov 30 16:14:27 2022 +0000
@@ -4,6 +4,7 @@
 VERSION=1.1
 ##v1.0 : Init
 ##V1.1 : calculating and adding [M+H]+ and [M-H]- mono isotopic mass in banks
+##V1.1.1 : Links updating
 #
 ## ARGVT
 PROTON_MASS=1.007825
@@ -15,44 +16,54 @@
 
 #HMDB archive url
 HMDB_URL=
-## Serum
-SERUM_URL=http://www.hmdb.ca/system/downloads/current/serum_metabolites.zip
+## Sweat - added 22/11/28
+SWEAT_URL=https://hmdb.ca/system/downloads/current/sweat_metabolites.zip
+SWEAT_FILE_NAME=sweat_metabolites.xml
+SWEAT_HTTP_FORMAT=ZIP
+SWEAT_DB_FORMAT=XML
+## Serum - updated 22/11/28
+SERUM_URL=https://hmdb.ca/system/downloads/current/serum_metabolites.zip
 SERUM_FILE_NAME=serum_metabolites.xml
 SERUM_HTTP_FORMAT=ZIP
 SERUM_DB_FORMAT=XML
-## Urine
-URINE_URL=http://www.hmdb.ca/system/downloads/current/urine_metabolites.zip
+## Urine - updated 22/11/28
+URINE_URL=https://hmdb.ca/system/downloads/current/urine_metabolites.zip
 URINE_FILE_NAME=urine_metabolites.xml
 URINE_HTTP_FORMAT=ZIP
 URINE_DB_FORMAT=XML
 ## Other matrices:
-## CSF
-CSF_URL=http://www.hmdb.ca/system/downloads/current/csf_metabolites.zip
+## CSF - updated 22/11/28
+CSF_URL=https://hmdb.ca/system/downloads/current/csf_metabolites.zip
 CSF_FILE_NAME=csf_metabolites.xml
 CSF_HTTP_FORMAT=ZIP
 CSF_DB_FORMAT=XML
-##FECES
-FECES_URL=http://www.fecalmetabolome.ca/system/downloads/current/feces_metabolites.zip
+##FECES - updated 22/11/28
+FECES_URL=https://hmdb.ca/system/downloads/current/feces_metabolites.zip
 FECES_FILE_NAME=feces_metabolites.xml
 FECES_HTTP_FORMAT=ZIP
 FECES_DB_FORMAT=XML
-##SALIVA
-SALIVA_URL=http://www.salivametabolome.ca/system/downloads/current/saliva_metabolites.zip
+##SALIVA - updated 22/11/28
+SALIVA_URL=https://hmdb.ca/system/downloads/current/saliva_metabolites.zip
 SALIVA_FILE_NAME=saliva_metabolites.xml
 SALIVA_HTTP_FORMAT=ZIP
 SALIVA_DB_FORMAT=XML
-##RUMEN
-RUMEN_URL=http://www.rumendb.ca/public/downloads/current/metabocards.gz
-RUMEN_FILE_NAME=metabocards
-RUMEN_HTTP_FORMAT=GZ
-RUMEN_DB_FORMAT=CARD
-##COW
-COW_URL=http://www.cowmetdb.ca/public/downloads/current/metabocards.gz
-COW_FILE_NAME=metabocards
-COW_HTTP_FORMAT=GZ
-COW_DB_FORMAT=CARD
-##MILK
-MILK_URL=http://www.mcdb.ca/system/downloads/current/milk_metabolites.zip
+##RUMEN - updated 22/11/28
+#RUMEN_URL=https://www.rumendb.ca/public/downloads/current/metabocards.gz
+#RUMEN_FILE_NAME=metabocards
+#RUMEN_HTTP_FORMAT=GZ
+#RUMEN_DB_FORMAT=CARD
+##COW - updated 22/11/28
+COW_URL=https://www.bovinedb.ca/system/downloads/current/bmdb_metabolites.zip
+COW_FILE_NAME=bmdb_metabolites.xml
+COW_HTTP_FORMAT=ZIP
+COW_DB_FORMAT=XML
+##MILK - updated 22/11/28
+MILK_URL=https://mcdb.ca/system/downloads/current/milk_metabolites.zip
 MILK_FILE_NAME=milk_metabolites.xml
 MILK_HTTP_FORMAT=ZIP
-MILK_DB_FORMAT=XML
\ No newline at end of file
+MILK_DB_FORMAT=XML
+##T3DB
+TOXIN_URL=http://www.t3db.ca/system/downloads/current/toxins.xml.zip
+TOXIN_FILE_NAME=toxins.xml
+TOXIN_HTTP_FORMAT=ZIP
+TOXIN_DB_FORMAT=XML
\ No newline at end of file