Mercurial > repos > fgiacomoni > hmdb_ms_search
comparison wsdl_hmdb.xml @ 23:2d8a310e86ce draft
Prod branch Updating with v.:CI_COMMIT_TAG- - Fxx
author | fgiacomoni |
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date | Thu, 19 May 2022 13:43:09 +0000 |
parents | 453fbe98925a |
children | d8e2ede293a6 |
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22:453fbe98925a | 23:2d8a310e86ce |
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1 <tool id="wsdl_hmdb" name="HMDB MS search" version="1.6.1"> | 1 <tool id="wsdl_hmdb" name="HMDB MS search" version="1.7.0"> |
2 <description> | 2 <description> |
3 search by masses on HMDB online LCMS bank | 3 search by masses on HMDB online LCMS bank |
4 </description> | 4 </description> |
5 | 5 |
6 <requirements> | 6 <requirements> |
241 | 241 |
242 <help><![CDATA[ | 242 <help><![CDATA[ |
243 | 243 |
244 .. class:: infomark | 244 .. class:: infomark |
245 | 245 |
246 **Authors** Marion Landi and Franck Giacomoni | 246 **Authors** Marion Landi, Yann Guitton and Franck Giacomoni |
247 | 247 |
248 --------------------------------------------------- | 248 --------------------------------------------------- |
249 | 249 |
250 .. class:: infomark | 250 .. class:: infomark |
251 | 251 |
252 **Please cite** If you use this tool, please add the following reference | 252 **Please cite** If you use this tool, please add the following reference |
253 | Wishart DS, Jewison T, Guo AC, Wilson M, Knox C, et al., HMDB 3.0 — The Human Metabolome Database in 2013. Nucleic Acids Res. 2013. | 253 | Wishart DS, Jewison T, Guo AC, Wilson M, Knox C, et al., HMDB 3.0 — The Human Metabolome Database in 2013. Nucleic Acids Res. 2013. |
254 | Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, et al., HMDB 4.0 — The Human Metabolome Database for 2018. Nucleic Acids Res. 2018. | 254 | Wishart DS, Feunang YD, Marcu A, Guo AC, Liang K, et al., HMDB 4.0 — The Human Metabolome Database for 2018. Nucleic Acids Res. 2018. |
255 | Wishart DS et al, HMDB 5.0 - the Human Metabolome Database for 2022, Nucleic Acids Res. 2022. | |
255 | 256 |
256 | 257 |
257 --------------------------------------------------- | 258 --------------------------------------------------- |
258 | 259 |
259 ============== | 260 ============== |
374 | Format Data For Postprocessing | 375 | Format Data For Postprocessing |
375 | Perform LCMS Annotations | 376 | Perform LCMS Annotations |
376 | 377 |
377 .. class:: warningmark | 378 .. class:: warningmark |
378 | 379 |
379 And their "W4M courses 2018": | 380 And their "W4M courses 2021": |
380 | Using Galaxy4Metabolomics - W4M table format for Galaxy | 381 | Using Galaxy4Metabolomics - W4M table format for Galaxy |
381 | Annotation Banks - Annotation | 382 | Annotation Banks - Annotation |
382 | 383 |
383 | 384 |
384 ]]></help> | 385 ]]></help> |
385 <!-- [RECOMMANDED] All citations associated to this tool (main citation given above and other references). Can be extracted from the history panel --> | 386 <!-- [RECOMMANDED] All citations associated to this tool (main citation given above and other references). Can be extracted from the history panel --> |
386 <citations> | 387 <citations> |
387 <citation type="doi">10.1093/nar/gks1065</citation> | 388 <citation type="doi">10.1093/nar/gks1065</citation> |
388 <citation type="doi">10.1093/nar/gkx1089</citation> | 389 <citation type="doi">10.1093/nar/gkx1089</citation> |
390 <citation type="doi">10.1093/nar/gkab1062</citation> | |
389 </citations> | 391 </citations> |
390 </tool> | 392 </tool> |