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comparison wsdl_hmdb.xml @ 24:d8e2ede293a6 draft

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Prod branch Updating with v.:CI_COMMIT_TAG- - Fxx
author fgiacomoni
date Thu, 19 May 2022 14:41:34 +0000
parents 2d8a310e86ce
children 8f7546d0b925
comparison
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23:2d8a310e86ce 24:d8e2ede293a6
1 <tool id="wsdl_hmdb" name="HMDB MS search" version="1.7.0"> 1 <tool id="wsdl_hmdb" name="HMDB MS search" version="1.7.1">
2 <description> 2 <description>
3 search by masses on HMDB online LCMS bank 3 search by masses on HMDB v5 online LCMS bank
4 </description> 4 </description>
5 5
6 <requirements> 6 <requirements>
7 <requirement type="package" version="2.161">perl-data-dumper</requirement> 7 <requirement type="package" version="2.161">perl-data-dumper</requirement>
8 <requirement type="package" version="2.97">perl-html-template</requirement> 8 <requirement type="package" version="2.97">perl-html-template</requirement>
27 -header_choice "${input_type.header.header_choice}" 27 -header_choice "${input_type.header.header_choice}"
28 #if str($input_type.header.header_choice) == "yes": 28 #if str($input_type.header.header_choice) == "yes":
29 -nblineheader "${$input_type.header.nbHeader}" 29 -nblineheader "${$input_type.header.nbHeader}"
30 #end if 30 #end if
31 -colfactor "${input_type.colfactor}" 31 -colfactor "${input_type.colfactor}"
32 -output_tabular "$variableMetadata" -output_html "$HmdbOutWeb" -output_xls "$HmdbOutXlsx" 32 -output_tabular "$variableMetadata" -output_html "$HmdbOutWeb" -output_xlsx "$HmdbOutXlsx"
33 #else: 33 #else:
34 -mass "${input_type.mass}" 34 -mass "${input_type.mass}"
35 -output_tabular "$variableMetadata2" -output_html "$HmdbOutWeb2" -output_xls "$HmdbOutXlsx2" 35 -output_tabular "$variableMetadata2" -output_html "$HmdbOutWeb2" -output_xlsx "$HmdbOutXlsx2"
36 #end if 36 #end if
37 37
38 -mode "${mode_type.mode}" 38 -mode "${mode_type.mode}"
39 39
40 #if str($mode_type.mode) == "positive": 40 #if str($mode_type.mode) == "positive":
375 | Format Data For Postprocessing 375 | Format Data For Postprocessing
376 | Perform LCMS Annotations 376 | Perform LCMS Annotations
377 377
378 .. class:: warningmark 378 .. class:: warningmark
379 379
380 And their "W4M courses 2021": 380 And their "W4M courses 2022":
381 | Using Galaxy4Metabolomics - W4M table format for Galaxy 381 | Using Galaxy4Metabolomics - W4M table format for Galaxy
382 | Annotation Banks - Annotation 382 | Annotation Banks - Annotation
383 383
384 384
385 ]]></help> 385 ]]></help>