--- a/format_versionning.MD	Thu Nov 19 14:28:46 2020 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,91 +0,0 @@
-
-INTRODUCTION
-=====
-This file describes the format of the database generated by XSeeker
-Preprocessor. This format will evolve in the future to fit users
-wanted features. That's why there is a history of versions numbers,
-describing what they brought to the sqlite file, and how it was usefull.
-
-The first version (the older one) is at the bottom of this file, and the
-modifications provided by the newest versions are on top of the file.
-
-
-VERSION 1.1.2
-=====
-add missing mz_tab_info$group_length field to produce mzTab
-
-VERSION 1.1.1
-=====
-add missing mz_tab_info$dataset_path field to produce mzTab
-
-
-VERSION 1.1.0
-=====
-Summary:
- - The field `mz_tab_info` was added in new table smol_xcms_set.
-
-smol_xcms_set table added
------
-This table contains a subset of the original ms file.
-
-mz_tab_info field added to smol_xcms_set
------
-This field contains five subfields:
- - sampclass ;
- - sampnames ;
- - rtmed ;
- - mzmed ;
- - smallmolecule_abundance_assay .
-
-These fields were added after users asked to export data from XSeeker
-in mzTab files.
-XCMS has some functions to extract sampclass, sampnames, rtmed, mzmed
-and smallmolecule_abundance_assay from xcms set. Then, they are used
-in the mz tab creation process, but we didn't want to keep the whole
-xcmsset object. So we used the original code from XCMS and modified it
-a little bit, justifying the extraction of these new fields.
-
-
-VERSION 1.0.0
-=====
-
-
-DATABASE
------
-
-### SAMPLE
-
-#### RAW
-This structure is an epurated and enriched version of the original
-rdata, saved as a compressed env:  
-`blob::blob(fst::compress_fst(serialize(raw, NULL), compression=100))`
-
-The fields contained in the env are as follow:
-
-##### variableMetadata
-
-##### tic
-
-##### mz
-
-##### scanindex
-
-##### scantime
-
-##### intensity
-
-##### polarity
-
-##### sample_name
-
-##### dataset_path
-
-##### process_params
-
-##### enriched_rdata
-
-##### enriched_rdata_version
-
-##### tool_name
-
-##### enriched_rdata_doc
\ No newline at end of file