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1 <?xml version="1.0" ?>
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2 <tool id="qiime_feature-table_relative-frequency" name="qiime feature-table relative-frequency"
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3 version="2020.8">
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4 <description>Convert to relative frequencies</description>
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5 <requirements>
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6 <requirement type="package" version="2020.8">qiime2</requirement>
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7 </requirements>
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8 <command><![CDATA[
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9 qiime feature-table relative-frequency
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10
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11 --i-table=$itable
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12
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13 --o-relative-frequency-table=orelativefrequencytable
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14
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15 #if str($examples) != 'None':
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16 --examples=$examples
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17 #end if
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18
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19 ;
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20 cp orelativefrequencytable.qza $orelativefrequencytable
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21
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22 ]]></command>
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23 <inputs>
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24 <param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] The feature table to be converted into relative frequencies. [required]" name="itable" optional="False" type="data" />
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25 <param label="--examples: Show usage examples and exit." name="examples" optional="False" type="data" />
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26
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27 </inputs>
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28
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29 <outputs>
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30 <data format="qza" label="${tool.name} on ${on_string}: relativefrequencytable.qza" name="orelativefrequencytable" />
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31
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32 </outputs>
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33
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34 <help><![CDATA[
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35 Convert to relative frequencies
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36 ###############################################################
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37
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38 Convert frequencies to relative frequencies by dividing each frequency in a
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39 sample by the sum of frequencies in that sample.
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40
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41 Parameters
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42 ----------
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43 table : FeatureTable[Frequency]
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44 The feature table to be converted into relative frequencies.
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45
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46 Returns
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47 -------
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48 relative_frequency_table : FeatureTable[RelativeFrequency]
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49 The resulting relative frequency feature table.
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50 ]]></help>
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51 <macros>
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52 <import>qiime_citation.xml</import>
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53 </macros>
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54 <expand macro="qiime_citation"/>
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55 </tool> |
