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comparison qiime2/qiime_feature-classifier_fit-classifier-naive-bayes.xml @ 10:21c7954105a9 draft

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Fix
author florianbegusch
date Sun, 25 Aug 2019 10:26:27 -0400
parents f190567fe3f6
children a0a8d77a991c
comparison
equal deleted inserted replaced
9:f190567fe3f6 10:21c7954105a9
9 9
10 #if str( $id_to_taxonomy_fp.selector ) == 'history' 10 #if str( $id_to_taxonomy_fp.selector ) == 'history'
11 #set $tax = $id_to_taxonomy_fp.taxonomy_fp 11 #set $tax = $id_to_taxonomy_fp.taxonomy_fp
12 #else: 12 #else:
13 #set $tax_path = $id_to_taxonomy_fp.taxonomy_fp.fields.path 13 #set $tax_path = $id_to_taxonomy_fp.taxonomy_fp.fields.path
14 qiime tools import --type 'FeatureData[Taxonomy]' --source-format HeaderlessTSVTaxonomyFormat --input-path $tax_path --output-path ref-taxonomy.qza; 14 qiime tools import --type 'FeatureData[Taxonomy]' --input-format HeaderlessTSVTaxonomyFormat --input-path $tax_path --output-path ref-taxonomy.qza;
15 #set $tax='ref-taxonomy.qza' 15 #set $tax='ref-taxonomy.qza'
16 #end if 16 #end if
17 17
18 18
19 qiime feature-classifier fit-classifier-naive-bayes 19 qiime feature-classifier fit-classifier-naive-bayes