Mercurial > repos > florianbegusch > qiime2_suite
comparison qiime2/qiime_feature-table_heatmap.xml @ 4:914fa4daf16a draft
Fixes
author | florianbegusch |
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date | Wed, 31 Jul 2019 03:06:00 -0400 |
parents | 51025741f326 |
children | f190567fe3f6 |
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3:558645416841 | 4:914fa4daf16a |
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8 qiime feature-table heatmap | 8 qiime feature-table heatmap |
9 | 9 |
10 --i-table=$itable | 10 --i-table=$itable |
11 | 11 |
12 | 12 |
13 #if $input_files_mmetadatafile: | 13 --m-metadata-file=$mmedatafile |
14 #def list_dict_to_string(list_dict): | |
15 #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name') | |
16 #for d in list_dict[1:]: | |
17 #set $file_list = $file_list + ' --m-metadata-file=' + d['additional_input'].__getattr__('file_name') | |
18 #end for | |
19 #return $file_list | |
20 #end def | |
21 --m-metadata-file=$list_dict_to_string($input_files_mmetadatafile) | |
22 #end if | |
23 | 14 |
24 | 15 |
25 #if str($mmetadatacolumn): | 16 #if str($mmetadatacolumn): |
26 --m-metadata-column="$mmetadatacolumn" | 17 --m-metadata-column="$mmetadatacolumn" |
27 #end if | 18 #end if |
280 <option value="gist_earth">gist_earth</option> | 271 <option value="gist_earth">gist_earth</option> |
281 <option value="seismic">seismic</option> | 272 <option value="seismic">seismic</option> |
282 <option value="PRGn">PRGn</option> | 273 <option value="PRGn">PRGn</option> |
283 </param> | 274 </param> |
284 | 275 |
285 <repeat name="input_files_mmetadatafile" optional="True" title="--m-metadata-file"> | 276 <param label="--m-metadata-file" name="mmedatafile" optional="True" type="data" format="tabular,qza,no_unzip.zip" /> |
286 <param label="--m-metadata-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. [optional]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" /> | 277 |
287 </repeat> | |
288 </inputs> | 278 </inputs> |
289 <outputs> | 279 <outputs> |
290 <data format="html" label="${tool.name} on ${on_string}: visualization.qzv" name="ovisualization"/> | 280 <data format="html" label="${tool.name} on ${on_string}: visualization.qzv" name="ovisualization"/> |
291 </outputs> | 281 </outputs> |
292 <help><![CDATA[ | 282 <help><![CDATA[ |