Mercurial > repos > florianbegusch > qiime2_suite
comparison qiime2/qiime_phylogeny_align-to-tree-mafft-fasttree.xml @ 4:914fa4daf16a draft
Fixes
author | florianbegusch |
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date | Wed, 31 Jul 2019 03:06:00 -0400 |
parents | 370e0b6e9826 |
children | f190567fe3f6 |
comparison
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3:558645416841 | 4:914fa4daf16a |
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14 #if str($pnthreads): | 14 #if str($pnthreads): |
15 --p-n-threads="$pnthreads" | 15 --p-n-threads="$pnthreads" |
16 #end if | 16 #end if |
17 | 17 |
18 | 18 |
19 #if $pmaskmaxgapfrequency: | 19 #if str($pmaskmaxgapfrequency): |
20 --p-mask-max-gap-frequency=$pmaskmaxgapfrequency | 20 --p-mask-max-gap-frequency=$pmaskmaxgapfrequency |
21 #end if | 21 #end if |
22 | 22 |
23 #if $pmaskminconservation: | 23 #if str($pmaskminconservation): |
24 --p-mask-min-conservation=$pmaskminconservation | 24 --p-mask-min-conservation=$pmaskminconservation |
25 #end if | 25 #end if |
26 | 26 |
27 --o-alignment=oalignment | 27 --o-alignment=oalignment |
28 --o-masked-alignment=omaskedalignment | 28 --o-masked-alignment=omaskedalignment |