Mercurial > repos > florianbegusch > qiime2_suite

comparison qiime2/qiime_cutadapt_trim-single.xml @ 5:a025a4a89e07 draft

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Uploaded
author florianbegusch
date Mon, 05 Aug 2019 01:29:30 -0400
parents 914fa4daf16a
children f190567fe3f6
comparison
equal deleted inserted replaced
4:914fa4daf16a 5:a025a4a89e07
55 #end if 55 #end if
56 56
57 57
58 58
59 59
60 #if $perrorrate: 60 #if str($perrorrate):
61 --p-error-rate=$perrorrate 61 --p-error-rate=$perrorrate
62 #end if 62 #end if
63 63
64 #if $pnoindels: 64 #if $pnoindels:
65 --p-no-indels 65 --p-no-indels
66 #end if 66 #end if
67 67
68 #if $ptimes: 68 #if str($ptimes):
69 --p-times=$ptimes 69 --p-times=$ptimes
70 #end if 70 #end if
71 71
72 #if $poverlap: 72 #if str($poverlap):
73 --p-overlap=$poverlap 73 --p-overlap=$poverlap
74 #end if 74 #end if
75 75
76 #if $pmatchreadwildcards: 76 #if $pmatchreadwildcards:
77 --p-match-read-wildcards 77 --p-match-read-wildcards
79 79
80 #if $pnomatchadapterwildcards: 80 #if $pnomatchadapterwildcards:
81 --p-no-match-adapter-wildcards 81 --p-no-match-adapter-wildcards
82 #end if 82 #end if
83 83
84 #if $pminimumlength: 84 #if str($pminimumlength):
85 --p-minimum-length=$pminimumlength 85 --p-minimum-length=$pminimumlength
86 #end if 86 #end if
87 87
88 #if $pdiscarduntrimmed: 88 #if $pdiscarduntrimmed:
89 --p-discard-untrimmed 89 --p-discard-untrimmed