Mercurial > repos > florianbegusch > qiime2_suite
comparison qiime2/qiime_vsearch_cluster-features-closed-reference.xml @ 5:a025a4a89e07 draft
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author | florianbegusch |
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date | Mon, 05 Aug 2019 01:29:30 -0400 |
parents | 370e0b6e9826 |
children | f190567fe3f6 |
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4:914fa4daf16a | 5:a025a4a89e07 |
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7 <command><![CDATA[ | 7 <command><![CDATA[ |
8 qiime vsearch cluster-features-closed-reference | 8 qiime vsearch cluster-features-closed-reference |
9 --i-sequences=$isequences | 9 --i-sequences=$isequences |
10 --i-table=$itable | 10 --i-table=$itable |
11 --i-reference-sequences=$ireferencesequences | 11 --i-reference-sequences=$ireferencesequences |
12 --p-perc-identity="$ppercidentity" | 12 |
13 #if str($ppercidentity): | |
14 --p-perc-identity="$ppercidentity" | |
15 #end if | |
13 | 16 |
14 #if str($pstrand) != 'None': | 17 #if str($pstrand) != 'None': |
15 --p-strand=$pstrand | 18 --p-strand=$pstrand |
16 #end if | 19 #end if |
17 | 20 |