Mercurial > repos > florianbegusch > qiime2_suite

comparison qiime2/qiime_vsearch_join-pairs.xml @ 5:a025a4a89e07 draft

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Uploaded
author florianbegusch
date Mon, 05 Aug 2019 01:29:30 -0400
parents 370e0b6e9826
children f190567fe3f6
comparison
equal deleted inserted replaced
4:914fa4daf16a 5:a025a4a89e07
11 11
12 #if str($ptruncqual): 12 #if str($ptruncqual):
13 --p-truncqual="$ptruncqual" 13 --p-truncqual="$ptruncqual"
14 #end if 14 #end if
15 15
16 #if $pminlen: 16 #if str($pminlen):
17 --p-minlen=$pminlen 17 --p-minlen=$pminlen
18 #end if 18 #end if
19 19
20 #if str($pmaxns): 20 #if str($pmaxns):
21 --p-maxns="$pmaxns" 21 --p-maxns="$pmaxns"
23 23
24 #if $pallowmergestagger: 24 #if $pallowmergestagger:
25 --p-allowmergestagger 25 --p-allowmergestagger
26 #end if 26 #end if
27 27
28 #if $pminovlen: 28 #if str($pminovlen):
29 --p-minovlen=$pminovlen 29 --p-minovlen=$pminovlen
30 #end if 30 #end if
31 31
32 #if $pmaxdiffs: 32 #if str($pmaxdiffs):
33 --p-maxdiffs=$pmaxdiffs 33 --p-maxdiffs=$pmaxdiffs
34 #end if 34 #end if
35 35
36 #if str($pminmergelen): 36 #if str($pminmergelen):
37 --p-minmergelen="$pminmergelen" 37 --p-minmergelen="$pminmergelen"
43 43
44 #if str($pmaxee): 44 #if str($pmaxee):
45 --p-maxee="$pmaxee" 45 --p-maxee="$pmaxee"
46 #end if 46 #end if
47 47
48 #if $pqmin: 48 #if str($pqmin):
49 --p-qmin=$pqmin 49 --p-qmin=$pqmin
50 #end if 50 #end if
51 51
52 #if $pqminout: 52 #if str($pqminout):
53 --p-qminout=$pqminout 53 --p-qminout=$pqminout
54 #end if 54 #end if
55 55
56 #if $pqmax: 56 #if str($pqmax):
57 --p-qmax=$pqmax 57 --p-qmax=$pqmax
58 #end if 58 #end if
59 59
60 #if $pqmaxout: 60 #if str($pqmaxout):
61 --p-qmaxout=$pqmaxout 61 --p-qmaxout=$pqmaxout
62 #end if 62 #end if
63 63
64 --o-joined-sequences=ojoinedsequences 64 --o-joined-sequences=ojoinedsequences
65 ; 65 ;