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comparison qiime2/qiime_diversity_beta-rarefaction.xml @ 6:de4c22a52df4 draft

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Fixes
author florianbegusch
date Tue, 13 Aug 2019 07:46:48 -0400
parents 914fa4daf16a
children f190567fe3f6
comparison
equal deleted inserted replaced
5:a025a4a89e07 6:de4c22a52df4
6 </requirements> 6 </requirements>
7 <command><![CDATA[ 7 <command><![CDATA[
8 qiime diversity beta-rarefaction 8 qiime diversity beta-rarefaction
9 9
10 --i-table=$itable 10 --i-table=$itable
11
11 --p-metric=$pmetric 12 --p-metric=$pmetric
13
12 --p-clustering-method=$pclusteringmethod 14 --p-clustering-method=$pclusteringmethod
13 --p-sampling-depth="$psamplingdepth" 15
16 #if str($psamplingdepth):
17 --p-sampling-depth="$psamplingdepth"
18 #end if
14 19
15 #if str($iphylogeny) != 'None': 20 #if str($iphylogeny) != 'None':
16 --i-phylogeny=$iphylogeny 21 --i-phylogeny=$iphylogeny
17 #end if 22 #end if
18 23
19 #if $piterations: 24 #if str($piterations):
20 --p-iterations=$piterations 25 --p-iterations=$piterations
21 #end if 26 #end if
22 27
23 #if str($pcorrelationmethod) != 'None': 28 #if str($pcorrelationmethod) != 'None':
24 --p-correlation-method=$pcorrelationmethod 29 --p-correlation-method=$pcorrelationmethod