Mercurial > repos > florianbegusch > qiime2_suite
comparison qiime2/qiime_feature-classifier_classify-consensus-vsearch.xml @ 6:de4c22a52df4 draft
Fixes
author | florianbegusch |
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date | Tue, 13 Aug 2019 07:46:48 -0400 |
parents | 914fa4daf16a |
children | f190567fe3f6 |
comparison
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5:a025a4a89e07 | 6:de4c22a52df4 |
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19 --i-reference-taxonomy '$tax' | 19 --i-reference-taxonomy '$tax' |
20 #end if | 20 #end if |
21 | 21 |
22 | 22 |
23 | 23 |
24 #if $pmaxaccepts: | 24 #if str($pmaxaccepts): |
25 --p-maxaccepts=$pmaxaccepts | 25 --p-maxaccepts=$pmaxaccepts |
26 #end if | 26 #end if |
27 | 27 |
28 #if $ppercidentity: | 28 #if str($ppercidentity): |
29 --p-perc-identity=$ppercidentity | 29 --p-perc-identity=$ppercidentity |
30 #end if | 30 #end if |
31 | 31 |
32 #if $pquerycov: | 32 #if str($pquerycov): |
33 --p-query-cov=$pquerycov | 33 --p-query-cov=$pquerycov |
34 #end if | 34 #end if |
35 | 35 |
36 #if str($pstrand) != 'None': | 36 #if str($pstrand) != 'None': |
37 --p-strand=$pstrand | 37 --p-strand=$pstrand |
38 #end if | 38 #end if |
39 | 39 |
40 #if $pminconsensus: | 40 #if str($pminconsensus): |
41 --p-min-consensus=$pminconsensus | 41 --p-min-consensus=$pminconsensus |
42 #end if | 42 #end if |
43 | 43 |
44 | 44 |
45 | 45 |