diff qiime2-2020.8/qiime_tools_export_paired_collection.xml @ 20:d93d8888f0b0 draft

Uploaded
author florianbegusch
date Fri, 04 Sep 2020 12:44:24 +0000
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/qiime2-2020.8/qiime_tools_export_paired_collection.xml	Fri Sep 04 12:44:24 2020 +0000
@@ -0,0 +1,22 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<tool id="qiime_tools_export_paired_collection" name="qiime tools export --input-path to paired collection" version="2020.8">
+   <description>- Export data from a QIIME 2 Artifact or Visualization.</description>
+   <requirements>
+      <requirement type="package" version="2020.8">qiime2</requirement>
+   </requirements>
+   <command><![CDATA[qiime tools export --input-path $isequences --output-path test && cd test && gunzip *]]></command>
+   <inputs>
+      <param format="qza,no_unzip.zip" label="Input artifact to export! [required]" name="isequences" optional="False" type="data" />
+   </inputs>
+
+   <outputs>
+      <collection type="paired" label="Export artifact to collection" name="output">
+         <discover_datasets pattern="__designation_and_ext__" directory="test" />
+      </collection>
+   </outputs>
+   <help />
+<macros>
+	<import>qiime_citation.xml</import>
+</macros>
+<expand macro="qiime_citation" />
+</tool>
\ No newline at end of file