Mercurial > repos > florianbegusch > qiime2_suite
diff qiime2/qiime_diversity_core-metrics-phylogenetic.xml @ 6:de4c22a52df4 draft
Fixes
author | florianbegusch |
---|---|
date | Tue, 13 Aug 2019 07:46:48 -0400 |
parents | 914fa4daf16a |
children | f190567fe3f6 |
line wrap: on
line diff
--- a/qiime2/qiime_diversity_core-metrics-phylogenetic.xml Mon Aug 05 01:29:30 2019 -0400 +++ b/qiime2/qiime_diversity_core-metrics-phylogenetic.xml Tue Aug 13 07:46:48 2019 -0400 @@ -9,7 +9,10 @@ --i-table=$itable --i-phylogeny=$iphylogeny ---p-sampling-depth="$psamplingdepth" + +#if str($psamplingdepth): + --p-sampling-depth="$psamplingdepth" +#end if #set $pnjobs = '${GALAXY_SLOTS:-4}' #if str($pnjobs): @@ -21,7 +24,7 @@ #def list_dict_to_string(list_dict): #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name') #for d in list_dict[1:]: - #set $file_list = $file_list + ',' + d['additional_input'].__getattr__('file_name') + #set $file_list = $file_list + ' --m-metadata-file=' + d['additional_input'].__getattr__('file_name') #end for #return $file_list #end def