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author | florianbegusch |
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date | Thu, 03 Sep 2020 10:51:34 +0000 |
parents | a0a8d77a991c |
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<?xml version="1.0" ?> <tool id="qiime_feature-table_relative-frequency" name="qiime feature-table relative-frequency" version="2020.8"> <description>Convert to relative frequencies</description> <requirements> <requirement type="package" version="2020.8">qiime2</requirement> </requirements> <command><![CDATA[ qiime feature-table relative-frequency --i-table=$itable --o-relative-frequency-table=orelativefrequencytable #if str($examples) != 'None': --examples=$examples #end if ; cp orelativefrequencytable.qza $orelativefrequencytable ]]></command> <inputs> <param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] The feature table to be converted into relative frequencies. [required]" name="itable" optional="False" type="data" /> <param label="--examples: Show usage examples and exit." name="examples" optional="False" type="data" /> </inputs> <outputs> <data format="qza" label="${tool.name} on ${on_string}: relativefrequencytable.qza" name="orelativefrequencytable" /> </outputs> <help><![CDATA[ Convert to relative frequencies ############################################################### Convert frequencies to relative frequencies by dividing each frequency in a sample by the sum of frequencies in that sample. Parameters ---------- table : FeatureTable[Frequency] The feature table to be converted into relative frequencies. Returns ------- relative_frequency_table : FeatureTable[RelativeFrequency] The resulting relative frequency feature table. ]]></help> <macros> <import>qiime_citation.xml</import> </macros> <expand macro="qiime_citation"/> </tool>