view qiime2/qiime_feature-table_relative-frequency.xml @ 7:85b520815e85 draft

Uploaded
author florianbegusch
date Tue, 13 Aug 2019 07:53:59 -0400
parents 370e0b6e9826
children f190567fe3f6
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<?xml version="1.0" ?>
<tool id="qiime_feature-table_relative-frequency" name="qiime feature-table relative-frequency" version="2019.4">
	<description> - Convert to relative frequencies</description>
	<requirements>
		<requirement type="package" version="2019.4">qiime2</requirement>
	</requirements>
	<command><![CDATA[
qiime feature-table relative-frequency

--i-table=$itable

--o-relative-frequency-table=orelativefrequencytable
;
cp orelativefrequencytable.qza $orelativefrequencytable
	]]></command>
	<inputs>
		<param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] The feature table to be converted into relative frequencies.                                 [required]" name="itable" optional="False" type="data"/>
	</inputs>
	<outputs>
		<data format="qza" label="${tool.name} on ${on_string}: relativefrequencytable.qza" name="orelativefrequencytable"/>
	</outputs>
	<help><![CDATA[
Convert to relative frequencies
###############################

Convert frequencies to relative frequencies by dividing each frequency in a
sample by the sum of frequencies in that sample.

Parameters
----------
table : FeatureTable[Frequency]
    The feature table to be converted into relative frequencies.

Returns
-------
relative_frequency_table : FeatureTable[RelativeFrequency]
    The resulting relative frequency feature table.
	]]></help>
<macros>
    <import>qiime_citation.xml</import>
</macros>
<expand macro="qiime_citation"/>
</tool>