Mercurial > repos > florianbegusch > qiime2_suite
view qiime2/qiime_phylogeny_midpoint-root.xml @ 5:a025a4a89e07 draft
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author | florianbegusch |
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date | Mon, 05 Aug 2019 01:29:30 -0400 |
parents | 370e0b6e9826 |
children | f190567fe3f6 |
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<?xml version="1.0" ?> <tool id="qiime_phylogeny_midpoint-root" name="qiime phylogeny midpoint-root" version="2019.4"> <description> - Midpoint root an unrooted phylogenetic tree.</description> <requirements> <requirement type="package" version="2019.4">qiime2</requirement> </requirements> <command><![CDATA[ qiime phylogeny midpoint-root --i-tree=$itree --o-rooted-tree=orootedtree ; cp orootedtree.qza $orootedtree ]]></command> <inputs> <param format="qza,no_unzip.zip" label="--i-tree: ARTIFACT Phylogeny[Unrooted] The phylogenetic tree to be rooted. [required]" name="itree" optional="False" type="data"/> </inputs> <outputs> <data format="qza" label="${tool.name} on ${on_string}: rootedtree.qza" name="orootedtree"/> </outputs> <help><![CDATA[ Midpoint root an unrooted phylogenetic tree. ############################################ Midpoint root an unrooted phylogenetic tree. Parameters ---------- tree : Phylogeny[Unrooted] The phylogenetic tree to be rooted. Returns ------- rooted_tree : Phylogeny[Rooted] The rooted phylogenetic tree. ]]></help> <macros> <import>qiime_citation.xml</import> </macros> <expand macro="qiime_citation"/> </tool>