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[up]
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drwxr-xr-x |
 merge_feature_table_and_taxonomy.xml
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1231 |
-rw-r--r-- |
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qiime_alignment_mafft.xml
|
1738 |
-rw-r--r-- |
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qiime_alignment_mask.xml
|
3359 |
-rw-r--r-- |
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qiime_citation.xml
|
3603 |
-rw-r--r-- |
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qiime_composition_add-pseudocount.xml
|
1605 |
-rw-r--r-- |
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qiime_composition_ancom.xml
|
3375 |
-rw-r--r-- |
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qiime_cutadapt_demux-paired.xml
|
5632 |
-rw-r--r-- |
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qiime_cutadapt_demux-single.xml
|
3773 |
-rw-r--r-- |
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qiime_cutadapt_trim-paired.xml
|
11683 |
-rw-r--r-- |
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qiime_cutadapt_trim-single.xml
|
8035 |
-rw-r--r-- |
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qiime_dada2_denoise-paired.xml
|
11546 |
-rw-r--r-- |
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qiime_dada2_denoise-pyro.xml
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8487 |
-rw-r--r-- |
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qiime_dada2_denoise-single.xml
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7729 |
-rw-r--r-- |
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qiime_deblur_denoise-16S.xml
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5685 |
-rw-r--r-- |
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qiime_deblur_denoise-other.xml
|
6096 |
-rw-r--r-- |
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qiime_deblur_visualize-stats.xml
|
1359 |
-rw-r--r-- |
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qiime_demux_emp-paired.xml
|
4347 |
-rw-r--r-- |
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qiime_demux_emp-single.xml
|
4382 |
-rw-r--r-- |
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qiime_demux_filter-samples.xml
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2723 |
-rw-r--r-- |
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qiime_demux_subsample-paired.xml
|
1999 |
-rw-r--r-- |
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qiime_demux_subsample-single.xml
|
2036 |
-rw-r--r-- |
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qiime_demux_summarize.xml
|
2342 |
-rw-r--r-- |
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qiime_diversity_adonis.xml
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4485 |
-rw-r--r-- |
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qiime_diversity_alpha-correlation.xml
|
2624 |
-rw-r--r-- |
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qiime_diversity_alpha-group-significance.xml
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2193 |
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qiime_diversity_alpha-phylogenetic-alt.xml
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1593 |
-rw-r--r-- |
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qiime_diversity_alpha-phylogenetic.xml
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2361 |
-rw-r--r-- |
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qiime_diversity_alpha-rarefaction.xml
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6340 |
-rw-r--r-- |
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qiime_diversity_alpha.xml
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3320 |
-rw-r--r-- |
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qiime_diversity_beta-correlation.xml
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5604 |
-rw-r--r-- |
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qiime_diversity_beta-group-significance.xml
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3415 |
-rw-r--r-- |
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qiime_diversity_beta-phylogenetic.xml
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5011 |
-rw-r--r-- |
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qiime_diversity_beta-rarefaction.xml
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8471 |
-rw-r--r-- |
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qiime_diversity_beta.xml
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3415 |
-rw-r--r-- |
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qiime_diversity_bioenv.xml
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2362 |
-rw-r--r-- |
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qiime_diversity_core-metrics-phylogenetic.xml
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9575 |
-rw-r--r-- |
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qiime_diversity_core-metrics.xml
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5821 |
-rw-r--r-- |
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qiime_diversity_filter-distance-matrix.xml
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3809 |
-rw-r--r-- |
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qiime_diversity_mantel.xml
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4882 |
-rw-r--r-- |
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qiime_diversity_pcoa-biplot.xml
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1731 |
-rw-r--r-- |
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qiime_diversity_pcoa.xml
|
2800 |
-rw-r--r-- |
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qiime_diversity_procrustes-analysis.xml
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2251 |
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qiime_emperor_biplot.xml
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4596 |
-rw-r--r-- |
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qiime_emperor_plot.xml
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3639 |
-rw-r--r-- |
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qiime_emperor_procrustes-plot.xml
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4246 |
-rw-r--r-- |
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qiime_feature-classifier_classify-consensus-blast.xml
|
6890 |
-rw-r--r-- |
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qiime_feature-classifier_classify-consensus-vsearch.xml
|
6267 |
-rw-r--r-- |
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qiime_feature-classifier_classify-hybrid-vsearch-sklearn.xml
|
5597 |
-rw-r--r-- |
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qiime_feature-classifier_classify-sklearn.xml
|
4036 |
-rw-r--r-- |
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qiime_feature-classifier_extract-reads.xml
|
4739 |
-rw-r--r-- |
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qiime_feature-classifier_fit-classifier-naive-bayes.xml
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10653 |
-rw-r--r-- |
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qiime_feature-classifier_fit-classifier-sklearn.xml
|
2666 |
-rw-r--r-- |
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qiime_feature-table_core-features.xml
|
2678 |
-rw-r--r-- |
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qiime_feature-table_filter-features.xml
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5609 |
-rw-r--r-- |
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qiime_feature-table_filter-samples.xml
|
5768 |
-rw-r--r-- |
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qiime_feature-table_filter-seqs.xml
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4139 |
-rw-r--r-- |
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qiime_feature-table_group.xml
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2888 |
-rw-r--r-- |
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qiime_feature-table_heatmap.xml
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15843 |
-rw-r--r-- |
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qiime_feature-table_merge-seqs.xml
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1886 |
-rw-r--r-- |
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qiime_feature-table_merge-taxa.xml
|
1903 |
-rw-r--r-- |
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qiime_feature-table_merge.xml
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2239 |
-rw-r--r-- |
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qiime_feature-table_presence-absence.xml
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1443 |
-rw-r--r-- |
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qiime_feature-table_rarefy.xml
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2447 |
-rw-r--r-- |
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qiime_feature-table_relative-frequency.xml
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1472 |
-rw-r--r-- |
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qiime_feature-table_subsample.xml
|
2198 |
-rw-r--r-- |
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qiime_feature-table_summarize.xml
|
2094 |
-rw-r--r-- |
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qiime_feature-table_tabulate-seqs.xml
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1467 |
-rw-r--r-- |
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qiime_feature-table_transpose.xml
|
1300 |
-rw-r--r-- |
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qiime_fragment-insertion_classify-otus-experimental.xml
|
3165 |
-rw-r--r-- |
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qiime_fragment-insertion_filter-features.xml
|
3061 |
-rw-r--r-- |
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qiime_fragment-insertion_sepp.xml
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4873 |
-rw-r--r-- |
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qiime_gneiss_assign-ids.xml
|
2086 |
-rw-r--r-- |
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qiime_gneiss_balance-taxonomy.xml
|
5330 |
-rw-r--r-- |
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qiime_gneiss_correlation-clustering.xml
|
2054 |
-rw-r--r-- |
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qiime_gneiss_dendrogram-heatmap.xml
|
8574 |
-rw-r--r-- |
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qiime_gneiss_gradient-clustering.xml
|
3342 |
-rw-r--r-- |
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qiime_gneiss_ilr-hierarchical.xml
|
2706 |
-rw-r--r-- |
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qiime_gneiss_ilr-phylogenetic.xml
|
3155 |
-rw-r--r-- |
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qiime_gneiss_lme-regression.xml
|
4025 |
-rw-r--r-- |
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qiime_gneiss_ols-regression.xml
|
3744 |
-rw-r--r-- |
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qiime_longitudinal_anova.xml
|
4081 |
-rw-r--r-- |
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qiime_longitudinal_feature-volatility.xml
|
8417 |
-rw-r--r-- |
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qiime_longitudinal_first-differences.xml
|
5962 |
-rw-r--r-- |
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qiime_longitudinal_first-distances.xml
|
5415 |
-rw-r--r-- |
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qiime_longitudinal_linear-mixed-effects.xml
|
8853 |
-rw-r--r-- |
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qiime_longitudinal_maturity-index.xml
|
13442 |
-rw-r--r-- |
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qiime_longitudinal_nmit.xml
|
3791 |
-rw-r--r-- |
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qiime_longitudinal_pairwise-differences.xml
|
7750 |
-rw-r--r-- |
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qiime_longitudinal_pairwise-distances.xml
|
7267 |
-rw-r--r-- |
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qiime_longitudinal_plot-feature-volatility.xml
|
4930 |
-rw-r--r-- |
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qiime_longitudinal_volatility.xml
|
5295 |
-rw-r--r-- |
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qiime_metadata_distance-matrix.xml
|
2290 |
-rw-r--r-- |
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qiime_metadata_tabulate.xml
|
2310 |
-rw-r--r-- |
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qiime_phylogeny_align-to-tree-mafft-fasttree.xml
|
4966 |
-rw-r--r-- |
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qiime_phylogeny_fasttree.xml
|
1355 |
-rw-r--r-- |
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qiime_phylogeny_filter-table.xml
|
1748 |
-rw-r--r-- |
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qiime_phylogeny_iqtree-ultrafast-bootstrap.xml
|
27182 |
-rw-r--r-- |
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qiime_phylogeny_iqtree.xml
|
24531 |
-rw-r--r-- |
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qiime_phylogeny_midpoint-root.xml
|
1200 |
-rw-r--r-- |
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qiime_phylogeny_raxml-rapid-bootstrap.xml
|
4232 |
-rw-r--r-- |
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qiime_phylogeny_raxml.xml
|
3590 |
-rw-r--r-- |
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qiime_quality-control_evaluate-composition.xml
|
8543 |
-rw-r--r-- |
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qiime_quality-control_evaluate-seqs.xml
|
2476 |
-rw-r--r-- |
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qiime_quality-control_evaluate-taxonomy.xml
|
6352 |
-rw-r--r-- |
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qiime_quality-control_exclude-seqs.xml
|
4671 |
-rw-r--r-- |
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qiime_quality-filter_q-score-joined.xml
|
3847 |
-rw-r--r-- |
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qiime_quality-filter_q-score.xml
|
3844 |
-rw-r--r-- |
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qiime_rep_set.loc
|
2240 |
-rw-r--r-- |
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qiime_sample-classifier_classify-samples-from-dist.xml
|
4755 |
-rw-r--r-- |
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qiime_sample-classifier_classify-samples-ncv.xml
|
6035 |
-rw-r--r-- |
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qiime_sample-classifier_classify-samples.xml
|
11065 |
-rw-r--r-- |
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qiime_sample-classifier_confusion-matrix.xml
|
4945 |
-rw-r--r-- |
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qiime_sample-classifier_fit-classifier.xml
|
6893 |
-rw-r--r-- |
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qiime_sample-classifier_fit-regressor.xml
|
6996 |
-rw-r--r-- |
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qiime_sample-classifier_heatmap.xml
|
17289 |
-rw-r--r-- |
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qiime_sample-classifier_metatable.xml
|
4491 |
-rw-r--r-- |
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qiime_sample-classifier_predict-classification.xml
|
2198 |
-rw-r--r-- |
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qiime_sample-classifier_predict-regression.xml
|
2176 |
-rw-r--r-- |
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qiime_sample-classifier_regress-samples-ncv.xml
|
6411 |
-rw-r--r-- |
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qiime_sample-classifier_regress-samples.xml
|
9497 |
-rw-r--r-- |
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qiime_sample-classifier_scatterplot.xml
|
2873 |
-rw-r--r-- |
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qiime_sample-classifier_split-table.xml
|
4214 |
-rw-r--r-- |
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qiime_sample-classifier_summarize.xml
|
1690 |
-rw-r--r-- |
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qiime_taxa_barplot.xml
|
3501 |
-rw-r--r-- |
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qiime_taxa_collapse.xml
|
3084 |
-rw-r--r-- |
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qiime_taxa_filter-seqs.xml
|
5351 |
-rw-r--r-- |
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qiime_taxa_filter-table.xml
|
5389 |
-rw-r--r-- |
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qiime_taxonomy.loc
|
1776 |
-rw-r--r-- |
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qiime_tools_export.xml
|
1003 |
-rw-r--r-- |
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qiime_tools_export_collection.xml
|
944 |
-rw-r--r-- |
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qiime_tools_export_paired_collection.xml
|
963 |
-rw-r--r-- |
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qiime_tools_import.xml
|
13593 |
-rw-r--r-- |
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qiime_vsearch_cluster-features-closed-reference.xml
|
5368 |
-rw-r--r-- |
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qiime_vsearch_cluster-features-de-novo.xml
|
3379 |
-rw-r--r-- |
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qiime_vsearch_cluster-features-open-reference.xml
|
5362 |
-rw-r--r-- |
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qiime_vsearch_dereplicate-sequences.xml
|
2659 |
-rw-r--r-- |
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qiime_vsearch_join-pairs.xml
|
6548 |
-rw-r--r-- |
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qiime_vsearch_uchime-denovo.xml
|
4302 |
-rw-r--r-- |
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qiime_vsearch_uchime-ref.xml
|
4907 |
-rw-r--r-- |
