|
2
|
1 <?xml version="1.0" encoding="UTF-8"?>
|
|
|
2 <tool id="qiime_tools_export_collection" name="qiime tools export --input-path collection" version="2019.4">
|
|
|
3 <description>- Export data from a QIIME 2 Artifact or Visualization.</description>
|
|
|
4 <requirements>
|
|
|
5 <requirement type="package" version="2019.4">qiime2</requirement>
|
|
|
6 </requirements>
|
|
|
7 <command><![CDATA[qiime tools export --input-path $isequences --output-dir test && cd test && gunzip *]]></command>
|
|
|
8 <inputs>
|
|
|
9 <param format="qza,no_unzip.zip" label="Input artifact to export! [required]" name="isequences" optional="False" type="data" />
|
|
|
10 </inputs>
|
|
|
11
|
|
|
12 <outputs>
|
|
|
13 <collection type="list" label="Export artifact to collection" name="output">
|
|
|
14 <discover_datasets pattern="__designation_and_ext__" directory="test" />
|
|
|
15 </collection>
|
|
|
16 </outputs>
|
|
|
17 <help />
|
|
|
18 <macros>
|
|
|
19 <import>qiime_citation.xml</import>
|
|
|
20 </macros>
|
|
|
21 <expand macro="qiime_citation" />
|
|
|
22 </tool> |
