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comparison qiime2/qiime_metadata_tabulate.xml @ 4:71f124e02000 draft default tip

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Fixes
author florianbegusch
date Tue, 13 Aug 2019 07:40:25 -0400
parents 149432539226
children
comparison
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3:eda5df31da55 4:71f124e02000
6 </requirements> 6 </requirements>
7 <command><![CDATA[ 7 <command><![CDATA[
8 qiime metadata tabulate 8 qiime metadata tabulate
9 9
10 10
11 #if $input_files_minputfile:
11 #def list_dict_to_string(list_dict): 12 #def list_dict_to_string(list_dict):
12 #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name') 13 #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name')
13 #for d in list_dict[1:]: 14 #for d in list_dict[1:]:
14 #set $file_list = $file_list + ' --m-input-file=' + d['additional_input'].__getattr__('file_name') 15 #set $file_list = $file_list + ' --m-input-file=' + d['additional_input'].__getattr__('file_name')
15 #end for 16 #end for
16 #return $file_list 17 #return $file_list
17 #end def 18 #end def
18 --m-input-file=$list_dict_to_string($input_files_minputfile) 19 --m-input-file=$list_dict_to_string($input_files_minputfile)
20 #end if
19 21
20 22
21 #if $ppagesize: 23 #if str($ppagesize):
22 --p-page-size=$ppagesize 24 --p-page-size=$ppagesize
23 #end if 25 #end if
24 26
25 --o-visualization=ovisualization 27 --o-visualization=ovisualization
26 ; 28 ;