Mercurial > repos > florianbegusch > qiime2_wrappers
comparison qiime2/qiime_alignment_mask.xml @ 4:71f124e02000 draft default tip
Fixes
| author | florianbegusch |
|---|---|
| date | Tue, 13 Aug 2019 07:40:25 -0400 |
| parents | 149432539226 |
| children |
comparison
equal
deleted
inserted
replaced
| 3:eda5df31da55 | 4:71f124e02000 |
|---|---|
| 17 | 17 |
| 18 #if $pminconservation: | 18 #if $pminconservation: |
| 19 --p-min-conservation=$pminconservation | 19 --p-min-conservation=$pminconservation |
| 20 #end if | 20 #end if |
| 21 | 21 |
| 22 ; | |
| 22 cp omaskedalignment.qza $omaskedalignment | 23 cp omaskedalignment.qza $omaskedalignment |
| 23 ]]></command> | 24 ]]></command> |
| 24 <inputs> | 25 <inputs> |
| 25 <param format="qza,no_unzip.zip" label="--i-alignment: ARTIFACT FeatureData[AlignedSequence] The alignment to be masked. [required]" name="ialignment" optional="False" type="data"/> | 26 <param format="qza,no_unzip.zip" label="--i-alignment: ARTIFACT FeatureData[AlignedSequence] The alignment to be masked. [required]" name="ialignment" optional="False" type="data"/> |
| 26 <param label="--p-max-gap-frequency: PROPORTION Range(0, 1, inclusive_end=True) The maximum relative frequency of gap characters in a column for the column to be retained. This relative frequency must be a number between 0.0 and 1.0 (inclusive), where 0.0 retains only those columns without gap characters, and 1.0 retains all columns regardless of gap character frequency. [default: 1.0]" name="pmaxgapfrequency" optional="True" type="float" min="0" max="1" exclude_max="False" value="1.0"/> | 27 <param label="--p-max-gap-frequency: PROPORTION Range(0, 1, inclusive_end=True) The maximum relative frequency of gap characters in a column for the column to be retained. This relative frequency must be a number between 0.0 and 1.0 (inclusive), where 0.0 retains only those columns without gap characters, and 1.0 retains all columns regardless of gap character frequency. [default: 1.0]" name="pmaxgapfrequency" optional="True" type="float" min="0" max="1" exclude_max="False" value="1.0"/> |