Mercurial > repos > florianbegusch > qiime2_wrappers
diff qiime2/qiime_sample-classifier_classify-samples-ncv.xml @ 4:71f124e02000 draft default tip
Fixes
author | florianbegusch |
---|---|
date | Tue, 13 Aug 2019 07:40:25 -0400 |
parents | 149432539226 |
children |
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--- a/qiime2/qiime_sample-classifier_classify-samples-ncv.xml Wed Jul 17 01:53:11 2019 -0400 +++ b/qiime2/qiime_sample-classifier_classify-samples-ncv.xml Tue Aug 13 07:40:25 2019 -0400 @@ -10,18 +10,14 @@ --i-table=$itable --m-metadata-column="$mmetadatacolumn" -#if $input_files_mmetadatafile: -#def list_dict_to_string(list_dict): - #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name') - #for d in list_dict[1:]: - #set $file_list = $file_list + ' --m-metadata-file=' + d['additional_input'].__getattr__('file_name') - #end for - #return $file_list -#end def - --m-metadata-file=$list_dict_to_string($input_files_mmetadatafile) + + +#if $metadatafile: + --m-metadata-file=$metadatafile #end if -#if $pcv: + +#if str($pcv): --p-cv=$pcv #end if @@ -36,7 +32,7 @@ #end if -#if $pnestimators: +#if str($pnestimators): --p-n-estimators=$pnestimators #end if @@ -81,9 +77,8 @@ <option value="ignore">ignore</option> </param> - <repeat name="input_files_mmetadatafile" optional="True" title="--m-metadata-file"> - <param label="--m-metadata-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. [optional]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" /> - </repeat> + <param label="--m-metadata-file METADATA" name="metadatafile" type="data" format="tabular,qza,no_unzip.zip" /> + </inputs> <outputs> <data format="qza" label="${tool.name} on ${on_string}: predictions.qza" name="opredictions"/>