Mercurial > repos > florianbegusch > qiime2_wrappers
diff qiime2/qiime_sample-classifier_split-table.xml @ 4:71f124e02000 draft default tip
Fixes
author | florianbegusch |
---|---|
date | Tue, 13 Aug 2019 07:40:25 -0400 |
parents | 149432539226 |
children |
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--- a/qiime2/qiime_sample-classifier_split-table.xml Wed Jul 17 01:53:11 2019 -0400 +++ b/qiime2/qiime_sample-classifier_split-table.xml Tue Aug 13 07:40:25 2019 -0400 @@ -12,21 +12,14 @@ -#if $input_files_mmetadatafile: -#def list_dict_to_string(list_dict): - #set $file_list = list_dict[0]['additional_input'].__getattr__('file_name') - #for d in list_dict[1:]: - #set $file_list = $file_list + ' --m-metadata-file=' + d['additional_input'].__getattr__('file_name') - #end for - #return $file_list -#end def - - --m-metadata-file=$list_dict_to_string($input_files_mmetadatafile) +#if $metadatafile: + --m-metadata-file=$metadatafile #end if -#if $ptestsize: + +#if str($ptestsize): --p-test-size=$ptestsize #end if @@ -47,7 +40,6 @@ ; cp otrainingtable.qza $otrainingtable; cp otesttable.qza $otesttable; -cp mmetadatafile.qza $mmetadatafile ]]></command> <inputs> <param format="qza,no_unzip.zip" label="--i-table: ARTIFACT FeatureTable[Frequency] Feature table containing all features that should be used for target prediction. [required]" name="itable" optional="False" type="data"/> @@ -61,9 +53,7 @@ <option value="ignore">ignore</option> </param> - <repeat name="input_files_mmetadatafile" optional="True" title="--m-metadata-file"> - <param label="--m-metadata-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. [optional]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" /> - </repeat> + <param label="--m-metadata-file METADATA" name="metadatafile" type="data" format="tabular,qza,no_unzip.zip" /> </inputs> <outputs>