<?xml version="1.0" ?>
<tool id="qiime_metadata_tabulate" name="qiime metadata tabulate" version="2018.4">
	<description> - Interactively explore Metadata in an HTML table</description>
	<requirements>
		<requirement type="package" version="2018.4">qiime2</requirement>
	</requirements>
	<command>
	<![CDATA[
	qiime metadata tabulate

	#def list_dict_to_string(list_dict):
		#set $file_list = list_dict[0]['additional_input'].__getattr__('file_name')
		#for d in list_dict[1:]:
			#set $file_list = $file_list + ' --m-input-file=' + d['additional_input'].__getattr__('file_name')
		#end for
		#return $file_list
	#end def

	 --m-input-file=$list_dict_to_string($input_files_minputfile)
	#if str($cmdconfig) != 'None':
	 --cmd-config=$cmdconfig
	#end if

	#if $ppagesize:
	 --p-page-size=$ppagesize
	#end if
	 --o-visualization=ovisualization;
	qiime tools export ovisualization.qzv --output-dir out   && mkdir -p '$ovisualization.files_path'
	&& cp -r out/* '$ovisualization.files_path'
	&& mv '$ovisualization.files_path/index.html' '$ovisualization'
	]]>
	</command>
	<inputs>
		<repeat name="input_files_minputfile" optional="False" title="--m-input-file">
			<param label="--m-input-file: Metadata file or artifact viewable as metadata. This option may be supplied multiple times to merge metadata. The metadata to tabulate.  [required]" name="additional_input" type="data" format="tabular,qza,no_unzip.zip" />
		</repeat>

		<param label="--p-page-size: The maximum number of Metadata records to display per page  [default: 100]" name="ppagesize" optional="True" type="integer" value="100"/>

		<param label="--cmd-config: Use config file for command options" name="cmdconfig" optional="True" type="data"/>
	</inputs>
	<outputs>
		<data format="html" label="${tool.name} on ${on_string}: visualization.qzv" name="ovisualization"/>
	</outputs>
	<help>
 <![CDATA[
Interactively explore Metadata in an HTML table
------------------------------------------------

Generate a tabular view of Metadata. The output visualization supports
interactive filtering, sorting, and exporting to common file formats.

Parameters
----------
input : Metadata
    The metadata to tabulate.
page_size : Int, optional
    The maximum number of Metadata records to display per page

Returns
-------
visualization : Visualization
		\
   	]]>
</help>
<macros>
	<import>qiime_citation.xml</import>
</macros>
<expand macro="qiime_citation" />
</tool>