# HG changeset patch # User fmercuri # Date 1624877055 0 # Node ID 7e1cfe0c55de92a5ea35fdb22e484f5c2266f13b # Parent caea32e429ce94f09e3eb67487a2b3e3a87ca99c Uploaded diff -r caea32e429ce -r 7e1cfe0c55de npt.xml --- a/npt.xml Wed Jun 23 19:03:55 2021 +0000 +++ b/npt.xml Mon Jun 28 10:44:15 2021 +0000 @@ -1,4 +1,4 @@ - + - constant-temperature and -pressure equilibration of a system macros.xml @@ -63,9 +63,9 @@ fourierspacing = 0.16 ; grid spacing for FFT ; Temperature coupling is on tcoupl = V-rescale ; modified Berendsen thermostat - tc-grps = Protein Non-Protein ; two coupling groups - more accurate - tau_t = 0.1 0.1 ; time constant, in ps - ref_t = $mdp.temperature $mdp.temperature ; reference temperature, one for each group, in K + tc-grps = $mdp.sysname ; two coupling groups - more accurate + tau_t = 0.1 ; time constant, in ps + ref_t = $mdp.temperature ; reference temperature, one for each group, in K ; Pressure coupling is on pcoupl = Parrinello-Rahman ; Pressure coupling on in NPT pcoupltype = isotropic ; uniform scaling of box vectors