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annotate data_manager_conf.xml @ 0:7403d6c4f510 draft default tip

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"planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
author frogs
date Mon, 23 Aug 2021 10:21:10 +0000
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
diff changeset
1 <?xml version="1.0"?>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
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2 <data_managers>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
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3 <data_manager tool_file="data_manager/FROGS_data_manager.xml" id="frogs_data_manager">
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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4 <data_table name="frogs_db">
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
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5 <output>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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6 <column name="value" />
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
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7 <column name="name" />
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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8 <column name="path" output_ref="output">
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
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9 <move type="directory" relativize_symlinks="False">
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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10 <source>#echo "/".join(str($path).split('/')[:-1])#</source>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">frogs_db/#echo str($path).split('/')[-2]#/</target>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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12 </move>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/frogs_db/#echo "/".join(str($path).split('/')[-2:])#</value_translation>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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14 <value_translation type="function">abspath</value_translation>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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15 </column>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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16 </output>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
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17 </data_table>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
parents:
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18 </data_manager>
7403d6c4f510 "planemo upload for repository https://github.com/geraldinepascal/FROGS-wrappers/ commit 2024a13846ea6f9bd94ae62e3b2a5a3aba8cd304"
frogs
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19 </data_managers>