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planemo upload for repository https://github.com/oinizan/FROGS-wrappers commit 0b900a51e220ce6f17c1e76292c06a5f4d934055-dirty
author frogs
date Thu, 25 Oct 2018 05:01:13 -0400
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{"rows": [{"id": "Cluster_1", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "CL500-29 marine group", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.39, 0.29, 0.29], "blast_affiliations": [{"perc_identity": 84.31, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "8e-68", "aln_length": 255, "perc_query_coverage": 70.83333333333334, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:16192:3924"}}, {"id": "Cluster_2", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.56, 0.56, 0.39], "blast_affiliations": [{"perc_identity": 84.77, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "5e-70", "aln_length": 256, "perc_query_coverage": 70.91412742382272, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:12521:5680"}}, {"id": "Cluster_3", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.79, 0.79, 0.76], "blast_affiliations": [{"perc_identity": 92.06, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "evalue": "2e-83", "aln_length": 214, "perc_query_coverage": 53.80710659898477, "subject": "KF182287.1.1248"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:16005:1920"}}, {"id": "Cluster_4", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Iamiaceae", "Iamia", "Iamia majanohamensis"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "Ferrithrix", "actinobacterium BGR 77"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.19, 0.19, 0.13], "blast_affiliations": [{"perc_identity": 86.49, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "Ferrithrix", "actinobacterium BGR 77"], "evalue": "2e-78", "aln_length": 259, "perc_query_coverage": 72.47191011235955, "subject": "GU168000.1.1473"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:14417:1745"}}, {"id": "Cluster_5", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "Acidimicrobium", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.31, 0.12, 0.12], "blast_affiliations": [{"perc_identity": 90.0, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "unknown genus", "unknown species"], "evalue": "2e-79", "aln_length": 220, "perc_query_coverage": 56.41025641025641, "subject": "EF471700.1.1483"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:19898:5958"}}, {"id": "Cluster_6", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "actinobacterium BGR 43"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.4, 0.4, 0.32], "blast_affiliations": [{"perc_identity": 82.35, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "2e-59", "aln_length": 255, "perc_query_coverage": 70.83333333333334, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:10625:3122"}}, {"id": "Cluster_7", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Sva0996 marine group", "unknown genus", "unidentified bacterium wb1_P06"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.32, 0.32, 0.32], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:19644:2236"}}, {"id": "Cluster_8", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "bacterium enrichment culture clone auto73_4W"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.56, 0.56, 0.23], "blast_affiliations": [{"perc_identity": 89.86, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "evalue": "8e-78", "aln_length": 217, "perc_query_coverage": 55.927835051546396, "subject": "KF182287.1.1248"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:19958:2207"}}, {"id": "Cluster_9", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Sva0996 marine group", "unknown genus", "unidentified bacterium wb1_P06"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.24, 0.24, 0.24], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:14723:9889"}}, {"id": "Cluster_10", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.56, 0.56, 0.4], "blast_affiliations": [{"perc_identity": 83.98, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "1e-66", "aln_length": 256, "perc_query_coverage": 70.91412742382272, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:22681:4284"}}, {"id": "Cluster_11", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "actinobacterium BGR 43"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.37, 0.37, 0.35], "blast_affiliations": [{"perc_identity": 84.71, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "2e-69", "aln_length": 255, "perc_query_coverage": 70.83333333333334, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:27968:12864"}}, {"id": "Cluster_12", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "actinobacterium BGR 43"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.35, 0.35, 0.33], "blast_affiliations": [{"perc_identity": 84.71, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "2e-69", "aln_length": 255, "perc_query_coverage": 71.22905027932961, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:14639:6828"}}, {"id": "Cluster_13", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.86, 0.86, 0.83], "blast_affiliations": [{"perc_identity": 92.72, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "evalue": "2e-83", "aln_length": 206, "perc_query_coverage": 53.09278350515464, "subject": "KF182287.1.1248"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:4008:12611"}}, {"id": "Cluster_14", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.36, 0.36, 0.31], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:21539:2936"}}, {"id": "Cluster_15", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "actinobacterium BGR 43"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.27, 0.27, 0.25], "blast_affiliations": [{"perc_identity": 82.95, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "8e-63", "aln_length": 258, "perc_query_coverage": 71.66666666666667, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:20802:4801"}}, {"id": "Cluster_16", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "Multi-affiliation"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.63, 0.63, 0.29], "blast_affiliations": [{"perc_identity": 88.07, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "bacterium enrichment culture clone auto8_4W"], "evalue": "4e-71", "aln_length": 218, "perc_query_coverage": 57.97872340425532, "subject": "GU731331.1.1375"}, {"perc_identity": 89.0, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "actinobacterium YJF2-33"], "evalue": "4e-71", "aln_length": 209, "perc_query_coverage": 55.319148936170215, "subject": "FJ405887.1.1482"}, {"perc_identity": 89.0, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "actinobacterium BGR 43"], "evalue": "4e-71", "aln_length": 209, "perc_query_coverage": 55.319148936170215, "subject": "GU167988.1.1472"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1102:16581:10470"}}, {"id": "Cluster_17", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.55, 0.54, 0.37], "blast_affiliations": [{"perc_identity": 84.31, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "8e-68", "aln_length": 255, "perc_query_coverage": 71.03064066852369, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:19782:3604"}}, {"id": "Cluster_18", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.49, 0.48, 0.34], "blast_affiliations": [{"perc_identity": 84.71, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "evalue": "2e-69", "aln_length": 255, "perc_query_coverage": 71.03064066852369, "subject": "JQ269315.1.1487"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:6692:9035"}}, {"id": "Cluster_19", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.44, 0.44, 0.43], "blast_affiliations": [{"perc_identity": 91.22, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "evalue": "8e-78", "aln_length": 205, "perc_query_coverage": 52.83505154639175, "subject": "KF182287.1.1248"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:20545:9379"}}, {"id": "Cluster_20", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.31, 0.31, 0.27], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:14438:5670"}}, {"id": "Cluster_21", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "Ferrithrix", "actinobacterium BGR 74"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.75, 0.26, 0.1], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:20869:4256"}}, {"id": "Cluster_22", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "Acidimicrobium", "unknown species"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.45, 0.16, 0.16], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1102:7862:4645"}}, {"id": "Cluster_23", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "unknown genus", "unknown species"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.71, 0.35, 0.34], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:13251:3399"}}, {"id": "Cluster_24", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "unidentified bacterium wb1_J07"], "blast_taxonomy": null, "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.38, 0.36, 0.26], "blast_affiliations": [], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:13562:5876"}}, {"id": "Cluster_25", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "unknown genus", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.27, 0.16, 0.15], "blast_affiliations": [{"perc_identity": 81.04, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "unknown genus", "unknown species"], "evalue": "4e-56", "aln_length": 269, "perc_query_coverage": 70.93333333333334, "subject": "EF471700.1.1483"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:13515:9183"}}, {"id": "Cluster_26", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.38, 0.38, 0.37], "blast_affiliations": [{"perc_identity": 91.22, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "evalue": "8e-78", "aln_length": 205, "perc_query_coverage": 52.83505154639175, "subject": "KF182287.1.1248"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:2885:13564"}}, {"id": "Cluster_27", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "OM1 clade", "unknown genus", "bacterium WH6-7"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "Ferrimicrobium", "Ferrimicrobium acidiphilum"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.91, 0.91, 0.88], "blast_affiliations": [{"perc_identity": 87.91, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "Acidimicrobiaceae", "Ferrimicrobium", "Ferrimicrobium acidiphilum"], "evalue": "5e-70", "aln_length": 215, "perc_query_coverage": 54.987212276214834, "subject": "AF251436.1.1466"}], "seed_id": "HWI-M00185:22:000000000-A53C9:1:1101:21255:10262"}}, {"id": "Cluster_28", "metadata": {"rdp_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "blast_taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "rdp_bootstrap": [1.0, 1.0, 1.0, 1.0, 0.73, 0.73, 0.73], "blast_affiliations": [{"perc_identity": 90.27, "taxonomy": ["Bacteria", "Actinobacteria", "Acidimicrobiia", "Acidimicrobiales", "unknown family", "unknown genus", "unknown species"], "evalue": 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