Mercurial > repos > fubar > bbgbigwig_dev
view test-data/test5.gff3 @ 3:3899b3091d4a draft
planemo upload for repository https://www.encodeproject.org/software/bedgraphtobigwig/
| author | fubar |
|---|---|
| date | Fri, 14 Jun 2024 23:46:14 +0000 |
| parents | 49c6f715bc82 |
| children |
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##gff-version 3 ##date Tue Jun 26 10:48:17 2007 ##sequence-region ctgA 1 50000 ##source gbrowse GFFToGalaxyDumper plugin ##NOTE: All features dumped. ctgA example my_feature 22132 24633 . + . ID=My_feature:f15 ctgA example my_feature 46990 48410 . - . ID=My_feature:f11 ctgA example my_feature 44705 47713 . - . ID=My_feature:f01 ctgA example my_feature 36649 40440 . - . ID=My_feature:f03 ctgA example my_feature 23072 23185 . + . ID=My_feature:f14 ctgA example my_feature 37242 38653 . + . ID=My_feature:f04 ctgA example motif 37497 40559 . - . ID=Motif:m15;Note=7-transmembrane ctgA example my_feature 36034 38167 . + . ID=My_feature:f09 ctgA example motif 28332 30033 . - . ID=Motif:m02;Note=HOX ctgA example my_feature 4715 5968 . - . ID=My_feature:f05 ctgA example motif 48253 48366 . + . ID=Motif:m01;Note=WD40 ctgA example BAC 1000 20000 . . . ID=BAC:b101.2;Note=Fingerprinted+BAC+with+end+reads ctgA example right_end_read 19500 20000 . - . Parent=BAC:b101.2 ctgA example left_end_read 1000 1500 . + . Parent=BAC:b101.2 ctgA example motif 13801 14007 . - . ID=Motif:m05;Note=helix+loop+helix ctgA example coding 1050 9000 . + . ID=mRNA:EDEN.1;Gene=EDEN ctgA example CDS 1201 1500 . + 0 Parent=mRNA:EDEN.1 ctgA example CDS 3000 3902 . + 0 Parent=mRNA:EDEN.1 ctgA example CDS 5000 5500 . + 0 Parent=mRNA:EDEN.1 ctgA example CDS 7000 7608 . + 0 Parent=mRNA:EDEN.1 ctgA example processed_transcript 1050 9000 . + . ID=mRNA:EDEN.1 ctgA example 5'-UTR 1050 1200 . + . Parent=mRNA:EDEN.1 ctgA example 3'-UTR 7609 9000 . + . Parent=mRNA:EDEN.1 ctgA est match 5410 7503 . - . ID=EST:agt830.3;Target=agt830.3+1+595 ctgA est HSP 7000 7503 . - . Parent=EST:agt830.3;Target=agt830.3+1+504 ctgA est HSP 5410 5500 . - . Parent=EST:agt830.3;Target=agt830.3+505+595 ctgA example motif 46012 48851 . + . ID=Motif:m09;Note=kinase ctgA example match 6885 8999 . - . ID=Match:seg03 ctgA example HSP 8306 8999 . - . Parent=Match:seg03 ctgA example HSP 8055 8080 . - . Parent=Match:seg03 ctgA example HSP 7410 7737 . - . Parent=Match:seg03 ctgA example HSP 6885 7241 . - . Parent=Match:seg03 ctgA example my_feature 13280 16394 . + . ID=My_feature:f08