Mercurial > repos > fubar > clustalw
comparison rgclustal/test-data/rgClustal_testout.log @ 3:9c4d943fbef7 draft default tip
Uploaded
| author | fubar |
|---|---|
| date | Sun, 01 Dec 2013 20:07:58 -0500 |
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| children |
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| 2:1b6570fe022e | 3:9c4d943fbef7 |
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| 2 | |
| 3 | |
| 4 CLUSTAL 2.1 Multiple Sequence Alignments | |
| 5 | |
| 6 | |
| 7 Sequence type explicitly set to DNA | |
| 8 Sequence format is Pearson | |
| 9 Sequence 1: c_briggsae-chrII_+_/43862-46313 60 bp | |
| 10 Sequence 2: c_remanei-Crem_Contig172_-_/123228-124941 60 bp | |
| 11 Sequence 3: c_brenneri-Cbre_Contig60_+_/627772-630087 60 bp | |
| 12 Sequence 4: c_elegans-II_+_/9706834-9708803 60 bp | |
| 13 Sequence 5: c_briggsae-chrIfooI_+_/43862-46313 60 bp | |
| 14 Sequence 6: c_remanei-Crem_Contig172foo_-_/123228-124941 60 bp | |
| 15 Sequence 7: c_brenneri-Cbre_Contig60gak_+_/627772-630087 60 bp | |
| 16 Sequence 8: c_elegans-II_+_more/9706834-9708803 60 bp | |
| 17 Sequence 9: c_briggsae-chrII_+_bar/43862-46313 60 bp | |
| 18 Sequence 10: c_remanei-Crem_Contig172zot_-_/123228-124941 60 bp | |
| 19 Sequence 11: c_brenneri-Cbre_Contig60fee_+_/627772-630087 60 bp | |
| 20 Sequence 12: c_elegans-II_+_meh/9706834-9708803 60 bp | |
| 21 Start of Pairwise alignments | |
| 22 Aligning... | |
| 23 | |
| 24 Sequences (1:2) Aligned. Score: 80 | |
| 25 Sequences (1:3) Aligned. Score: 88 | |
| 26 Sequences (1:4) Aligned. Score: 83 | |
| 27 Sequences (1:5) Aligned. Score: 21 | |
| 28 Sequences (1:6) Aligned. Score: 20 | |
| 29 Sequences (1:7) Aligned. Score: 23 | |
| 30 Sequences (1:8) Aligned. Score: 18 | |
| 31 Sequences (1:9) Aligned. Score: 21 | |
| 32 Sequences (1:10) Aligned. Score: 16 | |
| 33 Sequences (1:11) Aligned. Score: 25 | |
| 34 Sequences (1:12) Aligned. Score: 10 | |
| 35 Sequences (2:3) Aligned. Score: 85 | |
| 36 Sequences (2:4) Aligned. Score: 86 | |
| 37 Sequences (2:5) Aligned. Score: 21 | |
| 38 Sequences (2:6) Aligned. Score: 20 | |
| 39 Sequences (2:7) Aligned. Score: 25 | |
| 40 Sequences (2:8) Aligned. Score: 20 | |
| 41 Sequences (2:9) Aligned. Score: 36 | |
| 42 Sequences (2:10) Aligned. Score: 16 | |
| 43 Sequences (2:11) Aligned. Score: 22 | |
| 44 Sequences (2:12) Aligned. Score: 17 | |
| 45 Sequences (3:4) Aligned. Score: 85 | |
| 46 Sequences (3:5) Aligned. Score: 13 | |
| 47 Sequences (3:6) Aligned. Score: 20 | |
| 48 Sequences (3:7) Aligned. Score: 25 | |
| 49 Sequences (3:8) Aligned. Score: 20 | |
| 50 Sequences (3:9) Aligned. Score: 36 | |
| 51 Sequences (3:10) Aligned. Score: 16 | |
| 52 Sequences (3:11) Aligned. Score: 18 | |
| 53 Sequences (3:12) Aligned. Score: 25 | |
| 54 Sequences (4:5) Aligned. Score: 13 | |
| 55 Sequences (4:6) Aligned. Score: 11 | |
| 56 Sequences (4:7) Aligned. Score: 20 | |
| 57 Sequences (4:8) Aligned. Score: 10 | |
| 58 Sequences (4:9) Aligned. Score: 31 | |
| 59 Sequences (4:10) Aligned. Score: 17 | |
| 60 Sequences (4:11) Aligned. Score: 29 | |
| 61 Sequences (4:12) Aligned. Score: 14 | |
| 62 Sequences (5:6) Aligned. Score: 73 | |
| 63 Sequences (5:7) Aligned. Score: 83 | |
| 64 Sequences (5:8) Aligned. Score: 80 | |
| 65 Sequences (5:9) Aligned. Score: 31 | |
| 66 Sequences (5:10) Aligned. Score: 14 | |
| 67 Sequences (5:11) Aligned. Score: 14 | |
| 68 Sequences (5:12) Aligned. Score: 12 | |
| 69 Sequences (6:7) Aligned. Score: 80 | |
| 70 Sequences (6:8) Aligned. Score: 88 | |
| 71 Sequences (6:9) Aligned. Score: 26 | |
| 72 Sequences (6:10) Aligned. Score: 16 | |
| 73 Sequences (6:11) Aligned. Score: 25 | |
| 74 Sequences (6:12) Aligned. Score: 12 | |
| 75 Sequences (7:8) Aligned. Score: 78 | |
| 76 Sequences (7:9) Aligned. Score: 31 | |
| 77 Sequences (7:10) Aligned. Score: 10 | |
| 78 Sequences (7:11) Aligned. Score: 12 | |
| 79 Sequences (7:12) Aligned. Score: 12 | |
| 80 Sequences (8:9) Aligned. Score: 31 | |
| 81 Sequences (8:10) Aligned. Score: 10 | |
| 82 Sequences (8:11) Aligned. Score: 14 | |
| 83 Sequences (8:12) Aligned. Score: 12 | |
| 84 Sequences (9:10) Aligned. Score: 63 | |
| 85 Sequences (9:11) Aligned. Score: 84 | |
| 86 Sequences (9:12) Aligned. Score: 78 | |
| 87 Sequences (10:11) Aligned. Score: 64 | |
| 88 Sequences (10:12) Aligned. Score: 76 | |
| 89 Sequences (11:12) Aligned. Score: 46 | |
| 90 Guide tree file created: [/share/shared/galaxy/database/files/002/dataset_2705.dnd] | |
| 91 | |
| 92 There are 11 groups | |
| 93 Start of Multiple Alignment | |
| 94 | |
| 95 Aligning... | |
| 96 Group 1: Sequences: 2 Score:1045 | |
| 97 Group 2: Sequences: 2 Score:1016 | |
| 98 Group 3: Sequences: 4 Score:1001 | |
| 99 Group 4: Sequences: 2 Score:313 | |
| 100 Group 5: Sequences: 2 Score:731 | |
| 101 Group 6: Sequences: 4 Score:516 | |
| 102 Group 7: Sequences: 8 Score:344 | |
| 103 Group 8: Sequences: 2 Score:1016 | |
| 104 Group 9: Sequences: 2 Score:1054 | |
| 105 Group 10: Sequences: 4 Score:945 | |
| 106 Group 11: Sequences: 12 Score:380 | |
| 107 Alignment Score 6283 | |
| 108 firstres = 1 lastres = 63 | |
| 109 FASTA file created! | |
| 110 | |
| 111 Fasta-Alignment file created [/share/shared/galaxy/database/files/002/dataset_2726.dat] | |
| 112 |